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The map label for this gene is 55981424

Identifier: 55981424

GI number: 55981424

Start: 1383477

End: 1383872

Strand: Reverse

Name: 55981424

Synonym: TTHA1455

Alternate gene names: NA

Gene position: 1383872-1383477 (Counterclockwise)

Preceding gene: 55981425

Following gene: 55981423

Centisome position: 74.81

GC content: 59.6

Gene sequence:

>396_bases
ATGGCGATTAAGTCCAAAAGGTACCAGGAGGCCCGGCTCGAGGCCAGCACCAACCTGGAGCTCTACTGGTGGGTCTTCAT
GCGCGTCTCCGGGGTGGTGCTCGTCTTCTTGCTCATCGGCCACATGTGGATGAACGCCGTCCTCGTGGACCTCAACTCCA
TTGACTACGACTACGTGGCCAAGAGACTTTCCCAGACCACCTGGAAGGTCTACGACTGGCTGATCCTGGCCCTGGCGCTC
CTCCACGGGGGGAACGGGCTGCGCTACGTGCTGGACGACTGGGTGCGGGATCCCATGAAGCGCTTCTGGACCAAGGTGGT
GGTCTACAGCCTTTTGGCCTTTCTCTTCTTCCTGGGGAGCCTTTCCCTCTTTAACCACGACTTCGGGGTGAACTAG

Upstream 100 bases:

>100_bases
CGCTACCAGAAGCAGCTTTGGTACGCGGCCTGGGTCCTTTTCGTGGTCTTCTACCTGCCCTTCCTCGTCAAGATCGGGGG
CGGGATCCTCGGAGGGAGCC

Downstream 100 bases:

>100_bases
TATGGCGCACAGGCACGAGGTCATCGTGGTGGGTGCGGGCGGGGCGGGCCTCACGGCCGCCCTCTACGCGGCCAAGGAAG
GCGCGGACGTGGCGGTGGTC

Product: succinate dehydrogenase, membrane subunit SdhD

Products: NA

Alternate protein names: Succinate Dehydrogenase Subunit D; Succinate Dehydrogenase Hydrophobic Subunit SdhD; Succinate Dehydrogenase Cytochrome B Subunit

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MAIKSKRYQEARLEASTNLELYWWVFMRVSGVVLVFLLIGHMWMNAVLVDLNSIDYDYVAKRLSQTTWKVYDWLILALAL
LHGGNGLRYVLDDWVRDPMKRFWTKVVVYSLLAFLFFLGSLSLFNHDFGVN

Sequences:

>Translated_131_residues
MAIKSKRYQEARLEASTNLELYWWVFMRVSGVVLVFLLIGHMWMNAVLVDLNSIDYDYVAKRLSQTTWKVYDWLILALAL
LHGGNGLRYVLDDWVRDPMKRFWTKVVVYSLLAFLFFLGSLSLFNHDFGVN
>Mature_130_residues
AIKSKRYQEARLEASTNLELYWWVFMRVSGVVLVFLLIGHMWMNAVLVDLNSIDYDYVAKRLSQTTWKVYDWLILALALL
HGGNGLRYVLDDWVRDPMKRFWTKVVVYSLLAFLFFLGSLSLFNHDFGVN

Specific function: Unknown

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15415; Mature: 15284

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKSKRYQEARLEASTNLELYWWVFMRVSGVVLVFLLIGHMWMNAVLVDLNSIDYDYVA
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KRLSQTTWKVYDWLILALALLHGGNGLRYVLDDWVRDPMKRFWTKVVVYSLLAFLFFLGS
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLFNHDFGVN
HHHHCCCCCCC
>Mature Secondary Structure 
AIKSKRYQEARLEASTNLELYWWVFMRVSGVVLVFLLIGHMWMNAVLVDLNSIDYDYVA
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KRLSQTTWKVYDWLILALALLHGGNGLRYVLDDWVRDPMKRFWTKVVVYSLLAFLFFLGS
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLFNHDFGVN
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA