| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is ald [H]
Identifier: 55981416
GI number: 55981416
Start: 1374715
End: 1375752
Strand: Direct
Name: ald [H]
Synonym: TTHA1447
Alternate gene names: 55981416
Gene position: 1374715-1375752 (Clockwise)
Preceding gene: 55981415
Following gene: 55981417
Centisome position: 74.32
GC content: 73.89
Gene sequence:
>1038_bases ATGGAGTTCGGCGTGCCCAGAGAACGGTCGGGCGGGGAGATCCCGGAAAGGCGGGTGCCCCTCACGCCCCAGGGGGTGCG GGAGCTCGTCGCCTCGGGGCACCGGGTCTACGTGGAGCGGGGCGCGGGGGAAGGGGCGGGCTTTCCCGACGAGGCCTACG AGGAAGCGGGGGCCAGGCTCGTGGGCCGGGAGGAGGCCTTCGGCCGCCCCCAGGTGGTGCTCAAGGTGGCCCGCCCCACC CTCGAGGAGGTGGGGCTCATGCGCAAAAACGCCGTTCTCATGGCCTTCCTCCACCTGGCGGTGGCGGAAAGCCCCCTCGT GGAGGCCATGGCCCAAAAGGGCCTCACCGCCATCGGCTACGAGCTGGTGGGCGAGGAGGGCCGCCGCCCCGTCCTGAAGG CCATGAGCGAGATCGCCGGGCGCATGGCCCCCCAGCTCGCCGGGCGGCTCCTCGAGGCCCCCCAGGGCCCGGGCATCCTC CTCTCCGGCCTGGTGGGCATCCCCCCGGCGGACGTGGTCGTCCTGGGGGCGGGGGTCCTGGGCCGGGCGGCGGCGCGGGC CTTTCTGGGCGCGGGGGCCTCGGTCCACCTCCTGGACCGGGCCCTTCCCCCGCTGGAGGAGGCCGCCCGGGAGGCCCCGG GGGCCATCACCGCCCTCGTCACCCAGGACCGCCTGGAGCGGTACGTGGCCTTCGCCGACGTCCTGGTGGGGGCGGTGGCC GTCCCTGGGGAGCGCACCCCCCTTCTCCTCACCCGCGGCCTCCTCGCCCGCATGCGCCCCGGAAGCGTCCTCCTGGACTT CTCCATAGACCAGGGGGGCGTCTCGGAAACCAGCCGCCCTGGGGTCTACCAGGAGATGGGCGTCACCCACTTCTGCCTCC CCAACGTCCCCGCCCTCGTCCCCCGCACCGCAAGCCACGCCCTCACCCTCACCCTCCTCCCCTACCTGCTCCGGATCCAG GAAGACCCCCTGGCCCTTCCCGGGCTCCGCCAGGGGGCCTACCTCCTCTTCGGCGAGAAAGGAGGCCACCTAGAATGA
Upstream 100 bases:
>100_bases GAACGCAGGGGGCGAAACGCCCAAGCGCCCCGGCGGCCGCCACGTGGGGGCCTCTTCCCCAAGGACATCCGCCCCGGGGC TTTCGGCGTAGGCTTGGGGC
Downstream 100 bases:
>100_bases GCTACCGCAAGAAGCTCACCTCCCCCGAGGACGCCGTGGGCCTGATCCGCTCGGGGATGCGGGTCTTCGTCTCCGGCAAC GCCGCCACCCCCACGCCCCT
Product: alanine dehydrogenase
Products: NA
Alternate protein names: Stage V sporulation protein N [H]
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MEFGVPRERSGGEIPERRVPLTPQGVRELVASGHRVYVERGAGEGAGFPDEAYEEAGARLVGREEAFGRPQVVLKVARPT LEEVGLMRKNAVLMAFLHLAVAESPLVEAMAQKGLTAIGYELVGEEGRRPVLKAMSEIAGRMAPQLAGRLLEAPQGPGIL LSGLVGIPPADVVVLGAGVLGRAAARAFLGAGASVHLLDRALPPLEEAAREAPGAITALVTQDRLERYVAFADVLVGAVA VPGERTPLLLTRGLLARMRPGSVLLDFSIDQGGVSETSRPGVYQEMGVTHFCLPNVPALVPRTASHALTLTLLPYLLRIQ EDPLALPGLRQGAYLLFGEKGGHLE
Sequences:
>Translated_345_residues MEFGVPRERSGGEIPERRVPLTPQGVRELVASGHRVYVERGAGEGAGFPDEAYEEAGARLVGREEAFGRPQVVLKVARPT LEEVGLMRKNAVLMAFLHLAVAESPLVEAMAQKGLTAIGYELVGEEGRRPVLKAMSEIAGRMAPQLAGRLLEAPQGPGIL LSGLVGIPPADVVVLGAGVLGRAAARAFLGAGASVHLLDRALPPLEEAAREAPGAITALVTQDRLERYVAFADVLVGAVA VPGERTPLLLTRGLLARMRPGSVLLDFSIDQGGVSETSRPGVYQEMGVTHFCLPNVPALVPRTASHALTLTLLPYLLRIQ EDPLALPGLRQGAYLLFGEKGGHLE >Mature_345_residues MEFGVPRERSGGEIPERRVPLTPQGVRELVASGHRVYVERGAGEGAGFPDEAYEEAGARLVGREEAFGRPQVVLKVARPT LEEVGLMRKNAVLMAFLHLAVAESPLVEAMAQKGLTAIGYELVGEEGRRPVLKAMSEIAGRMAPQLAGRLLEAPQGPGIL LSGLVGIPPADVVVLGAGVLGRAAARAFLGAGASVHLLDRALPPLEEAAREAPGAITALVTQDRLERYVAFADVLVGAVA VPGERTPLLLTRGLLARMRPGSVLLDFSIDQGGVSETSRPGVYQEMGVTHFCLPNVPALVPRTASHALTLTLLPYLLRIQ EDPLALPGLRQGAYLLFGEKGGHLE
Specific function: This enzyme is a key factor in the assimilation of L- alanine as an energy source through the tricarboxylic acid cycle during sporulation [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=347, Percent_Identity=29.971181556196, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI122939153, Length=347, Percent_Identity=29.971181556196, Blast_Score=119, Evalue=3e-27, Organism=Escherichia coli, GI1787887, Length=350, Percent_Identity=30.5714285714286, Blast_Score=117, Evalue=9e-28, Organism=Caenorhabditis elegans, GI17550456, Length=350, Percent_Identity=28.5714285714286, Blast_Score=129, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 36471; Mature: 36471
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFGVPRERSGGEIPERRVPLTPQGVRELVASGHRVYVERGAGEGAGFPDEAYEEAGARL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCEE VGREEAFGRPQVVLKVARPTLEEVGLMRKNAVLMAFLHLAVAESPLVEAMAQKGLTAIGY ECCHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHH ELVGEEGRRPVLKAMSEIAGRMAPQLAGRLLEAPQGPGILLSGLVGIPPADVVVLGAGVL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCCHH GRAAARAFLGAGASVHLLDRALPPLEEAAREAPGAITALVTQDRLERYVAFADVLVGAVA HHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHC VPGERTPLLLTRGLLARMRPGSVLLDFSIDQGGVSETSRPGVYQEMGVTHFCLPNVPALV CCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCEEEECCCCCHHC PRTASHALTLTLLPYLLRIQEDPLALPGLRQGAYLLFGEKGGHLE CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MEFGVPRERSGGEIPERRVPLTPQGVRELVASGHRVYVERGAGEGAGFPDEAYEEAGARL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCEE VGREEAFGRPQVVLKVARPTLEEVGLMRKNAVLMAFLHLAVAESPLVEAMAQKGLTAIGY ECCHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHH ELVGEEGRRPVLKAMSEIAGRMAPQLAGRLLEAPQGPGILLSGLVGIPPADVVVLGAGVL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCCHH GRAAARAFLGAGASVHLLDRALPPLEEAAREAPGAITALVTQDRLERYVAFADVLVGAVA HHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHC VPGERTPLLLTRGLLARMRPGSVLLDFSIDQGGVSETSRPGVYQEMGVTHFCLPNVPALV CCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCEEEECCCCCHHC PRTASHALTLTLLPYLLRIQEDPLALPGLRQGAYLLFGEKGGHLE CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226620; 9384377 [H]