| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is thrB [H]
Identifier: 55981363
GI number: 55981363
Start: 1329948
End: 1330826
Strand: Direct
Name: thrB [H]
Synonym: TTHA1394
Alternate gene names: 55981363
Gene position: 1329948-1330826 (Clockwise)
Preceding gene: 55981362
Following gene: 55981364
Centisome position: 71.9
GC content: 73.61
Gene sequence:
>879_bases ATGGACCTCCCCCGCCTCTACGTCCCCGCCACCCTGGCCAACCTGGGCTCGGGCTTTGACGCCTTGGGGGTGGCCCTGGA CCTCTACCTCGAGGTGGAGGCCCACCCCGCCCCGGAGGACGCCTTCCTCTACGAGGGGGAAGGCCATGTGGAGGGTACAG ACAACCTGATCCACGAGGGGTACCGGGCCGGGATGCGGGCCCTGGGGCTAGAGCCCTTCCCCTTGCGGGTGCGGGCCTTC AACCCCATCCCCCTGGCCCGGGGCATGGGAAGCTCCTCCGCCGCCTTAGTGGCCGGGGTGGCCCTGGCGGACCGGCTTTC CGGGGGGAGGCTTGGGCGGGAGGGGGTCTTCCGGGTGGCGGCGGGGCTCGAGGGCCATCCCGACAACGTGGCCCCGGCGG TCTACGGGGGCTTCGTGGCCGCCCTGAGCGACCCCCCCTTGGCCATCCCCCTGCCGAGGCCCGAAGGGGTGCGCTTCGTC CTGGCCGTCCCCCCCTACGAGGTCCCCACCCCCTTGGCCCGGGAGGCCCTGCCCCGGGAGGTGCCCCTGGAGGACGCCAT CTACAACCTGGCAAGAAGCGCCCTCTGGCCCGCGGCGCTTTCCTCGGGGAGGCTCGAGGCCCTGAGGGAGGCCTGCCGCG ACCGGCTCCACCAGCCCCACCGGGCCCACCTCATGCCCGGGGTCCTGGAGGCGATAGAAGGCGCGCTAGAGGCCGGGGCC CTGGCGGCCTTCGTGGGCGGGGCGGGGCCCACCCTGGCCGCCCTGGCGCGCGCCGGGGAGGAAGCCCCCGTGATCCGGGC CCTTTCCGCCTACCGGGGCCCGGAAGGGCGCACGCTGGTATTGGGCATAGGGGAGGGATACTTTTGGAAGGAGACCTGA
Upstream 100 bases:
>100_bases GCCCTCCCCCGGGCAAGGAGGCTCCTCCAGGAGGGAAGGGTGCCCCCGGCCTTCTTCCCGCGGTAGCCTGGTATATTCGG GTGGGGTTTTGCCCGGCGCC
Downstream 100 bases:
>100_bases AGGCCATCCCCCTGACCGAGGTCCTGGAGCTGGTCCACGCCCATAGGCGCTCCGGGGTCCTGGAGGTGCGCACCGGGCCC CTTCCCCTCACCCTCCGCTT
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MDLPRLYVPATLANLGSGFDALGVALDLYLEVEAHPAPEDAFLYEGEGHVEGTDNLIHEGYRAGMRALGLEPFPLRVRAF NPIPLARGMGSSSAALVAGVALADRLSGGRLGREGVFRVAAGLEGHPDNVAPAVYGGFVAALSDPPLAIPLPRPEGVRFV LAVPPYEVPTPLAREALPREVPLEDAIYNLARSALWPAALSSGRLEALREACRDRLHQPHRAHLMPGVLEAIEGALEAGA LAAFVGGAGPTLAALARAGEEAPVIRALSAYRGPEGRTLVLGIGEGYFWKET
Sequences:
>Translated_292_residues MDLPRLYVPATLANLGSGFDALGVALDLYLEVEAHPAPEDAFLYEGEGHVEGTDNLIHEGYRAGMRALGLEPFPLRVRAF NPIPLARGMGSSSAALVAGVALADRLSGGRLGREGVFRVAAGLEGHPDNVAPAVYGGFVAALSDPPLAIPLPRPEGVRFV LAVPPYEVPTPLAREALPREVPLEDAIYNLARSALWPAALSSGRLEALREACRDRLHQPHRAHLMPGVLEAIEGALEAGA LAAFVGGAGPTLAALARAGEEAPVIRALSAYRGPEGRTLVLGIGEGYFWKET >Mature_292_residues MDLPRLYVPATLANLGSGFDALGVALDLYLEVEAHPAPEDAFLYEGEGHVEGTDNLIHEGYRAGMRALGLEPFPLRVRAF NPIPLARGMGSSSAALVAGVALADRLSGGRLGREGVFRVAAGLEGHPDNVAPAVYGGFVAALSDPPLAIPLPRPEGVRFV LAVPPYEVPTPLAREALPREVPLEDAIYNLARSALWPAALSSGRLEALREACRDRLHQPHRAHLMPGVLEAIEGALEAGA LAAFVGGAGPTLAALARAGEEAPVIRALSAYRGPEGRTLVLGIGEGYFWKET
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=278, Percent_Identity=28.4172661870504, Blast_Score=89, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6321814, Length=318, Percent_Identity=30.188679245283, Blast_Score=133, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 30690; Mature: 30690
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLPRLYVPATLANLGSGFDALGVALDLYLEVEAHPAPEDAFLYEGEGHVEGTDNLIHEG CCCCCEEHHHHHHHHCCCHHHHHEEEEEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHH YRAGMRALGLEPFPLRVRAFNPIPLARGMGSSSAALVAGVALADRLSGGRLGREGVFRVA HHHHHHHHCCCCCCEEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH AGLEGHPDNVAPAVYGGFVAALSDPPLAIPLPRPEGVRFVLAVPPYEVPTPLAREALPRE CCCCCCCCCCCHHHHHHHHEECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHCCCC VPLEDAIYNLARSALWPAALSSGRLEALREACRDRLHQPHRAHLMPGVLEAIEGALEAGA CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LAAFVGGAGPTLAALARAGEEAPVIRALSAYRGPEGRTLVLGIGEGYFWKET HHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCEEECCC >Mature Secondary Structure MDLPRLYVPATLANLGSGFDALGVALDLYLEVEAHPAPEDAFLYEGEGHVEGTDNLIHEG CCCCCEEHHHHHHHHCCCHHHHHEEEEEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHH YRAGMRALGLEPFPLRVRAFNPIPLARGMGSSSAALVAGVALADRLSGGRLGREGVFRVA HHHHHHHHCCCCCCEEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH AGLEGHPDNVAPAVYGGFVAALSDPPLAIPLPRPEGVRFVLAVPPYEVPTPLAREALPRE CCCCCCCCCCCHHHHHHHHEECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHCCCC VPLEDAIYNLARSALWPAALSSGRLEALREACRDRLHQPHRAHLMPGVLEAIEGALEAGA CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LAAFVGGAGPTLAALARAGEEAPVIRALSAYRGPEGRTLVLGIGEGYFWKET HHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA