| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is braE [H]
Identifier: 55981301
GI number: 55981301
Start: 1272404
End: 1273735
Strand: Direct
Name: braE [H]
Synonym: TTHA1332
Alternate gene names: 55981301
Gene position: 1272404-1273735 (Clockwise)
Preceding gene: 55981300
Following gene: 55981302
Centisome position: 68.79
GC content: 67.79
Gene sequence:
>1332_bases ATGAGCCTGCTCTCCCTCGCCCTAAGCCTCGTCTTCCTCGCCCTCTCCTTCCTCGCCCCCAACACCCTCACCGCCTTCCT GGGCCTGGGGGCCCTGGGGGTGGCCGCCTTCGCCCGGCTCGAGCCCCGGGTACGGACGTTGAACCTCGCCCTCCTCACCC TGGCCTTCACCCTCTTCCTGCGGAACTCCGGCAACACCCTGGGGCTCATCGGCCTCGTGGGGATCCTCGTGGCCCTCACG ACCCTCCCCCGGATCCCGCGCGGGATCCGGGTGGCCCTGGGCCTCGCCATCCTCCTCCTCTCCGTGCCCATCGCCGGGTT CGCCAACACCTTCATCTTTGAGCTCGGCATCCAGATCGGCATCTTCGCCGCCATGTCCCTGGGCCTCAACGTGGTGGTGG GGATGGCGGGGCTTCTGGACCTGGGTTACGCCGCCTTCTTCGCCGTGGGCGCCTACACCTGGGCCATCTTCGGCTCCCCC CAGGCGGGGAAGTTCCTCCAGGGCAACTTTCCCCTGCCCGGCGAGTACATGTACCTCTTCATGCTCATCGCCGTGGTCAC CACGGCCATCACCGGCCTCCTCATCGGCCTCCCCGCCCTAAGGCTCCGGGGGGACTACCTGGCCATCGTCACCCTGGGCC TCGGCGAGGTGGTGCGCATCCTGGCCAACAACCTGGACCACCCCATCAACATCACCAACGGACCCCAGGGGATCACCCCC GTGGGCCGTCCCCCCATTGACTGGTTCCGCAGCCTCATGGGGGCCCTGGGGGTGCGCCTGGACGAGACCACGGACTACCA GCTCTTCTTCTACCTCCTCGTCCTGGCGATGATCGGCCTCGTGGTCCTGGCCAACGTCAACCTGGCCAACTCCCGCTTCG GCCGCGCCTGGGTGGCCATCCGCGAGGACGAGATCGCCGCCCAGGCCATGGGCATCCCCCTCCTGCCCACCAAGCTCATC GCCTTCATGACCGGGGCGGCCTTTTCCGGGGTGATGGGGGTGATCTACGGGGCCCAGCGCACCTTCGTCTCCCCCGAGTC CTTCACCCTCCTGGCCTCCATCACCATCCTGGCCATGGTGATCCTGGGCGGGATGGGCTCCATCCCCGGGGCCATCCTGG GGGCGGCCGCCCTCACCATCCTCAACCTGGACATCCTCAAGACCTTTAGCGAGTTCGTCCGCACCAGCCTCCCCTGGATC CCGAGCCAGGTGGACCCCGCGAAGTACGAGAGGCTGGTCTTCGGGCTTATCCTCGTCTTGATGATGATCTACCGGCCCCA AGGCCTGATCCCCGAGGCCCGCCACCGGGCCGAGCTGGAGGAGGAGGCATGA
Upstream 100 bases:
>100_bases TCGGGACGGAGTACAAGGACGTGGTGGCCTTCCTCATCCTCATCTTCATCCTCCTCTTCCGGCCCCAAGGCCTCCTGGGC CAGATGGTTAAGGAGAAGGT
Downstream 100 bases:
>100_bases GGGTCCTCGAGGTCCAAGGGGTCACCAAGCGCTTCGGCGGGCTCGTGGCCGTGAACCAGGTGAGCCTGGAGGTGAACGAG GGGGGAGATCTTCTCCGTCA
Product: branched-chain amino acid ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MSLLSLALSLVFLALSFLAPNTLTAFLGLGALGVAAFARLEPRVRTLNLALLTLAFTLFLRNSGNTLGLIGLVGILVALT TLPRIPRGIRVALGLAILLLSVPIAGFANTFIFELGIQIGIFAAMSLGLNVVVGMAGLLDLGYAAFFAVGAYTWAIFGSP QAGKFLQGNFPLPGEYMYLFMLIAVVTTAITGLLIGLPALRLRGDYLAIVTLGLGEVVRILANNLDHPINITNGPQGITP VGRPPIDWFRSLMGALGVRLDETTDYQLFFYLLVLAMIGLVVLANVNLANSRFGRAWVAIREDEIAAQAMGIPLLPTKLI AFMTGAAFSGVMGVIYGAQRTFVSPESFTLLASITILAMVILGGMGSIPGAILGAAALTILNLDILKTFSEFVRTSLPWI PSQVDPAKYERLVFGLILVLMMIYRPQGLIPEARHRAELEEEA
Sequences:
>Translated_443_residues MSLLSLALSLVFLALSFLAPNTLTAFLGLGALGVAAFARLEPRVRTLNLALLTLAFTLFLRNSGNTLGLIGLVGILVALT TLPRIPRGIRVALGLAILLLSVPIAGFANTFIFELGIQIGIFAAMSLGLNVVVGMAGLLDLGYAAFFAVGAYTWAIFGSP QAGKFLQGNFPLPGEYMYLFMLIAVVTTAITGLLIGLPALRLRGDYLAIVTLGLGEVVRILANNLDHPINITNGPQGITP VGRPPIDWFRSLMGALGVRLDETTDYQLFFYLLVLAMIGLVVLANVNLANSRFGRAWVAIREDEIAAQAMGIPLLPTKLI AFMTGAAFSGVMGVIYGAQRTFVSPESFTLLASITILAMVILGGMGSIPGAILGAAALTILNLDILKTFSEFVRTSLPWI PSQVDPAKYERLVFGLILVLMMIYRPQGLIPEARHRAELEEEA >Mature_442_residues SLLSLALSLVFLALSFLAPNTLTAFLGLGALGVAAFARLEPRVRTLNLALLTLAFTLFLRNSGNTLGLIGLVGILVALTT LPRIPRGIRVALGLAILLLSVPIAGFANTFIFELGIQIGIFAAMSLGLNVVVGMAGLLDLGYAAFFAVGAYTWAIFGSPQ AGKFLQGNFPLPGEYMYLFMLIAVVTTAITGLLIGLPALRLRGDYLAIVTLGLGEVVRILANNLDHPINITNGPQGITPV GRPPIDWFRSLMGALGVRLDETTDYQLFFYLLVLAMIGLVVLANVNLANSRFGRAWVAIREDEIAAQAMGIPLLPTKLIA FMTGAAFSGVMGVIYGAQRTFVSPESFTLLASITILAMVILGGMGSIPGAILGAAALTILNLDILKTFSEFVRTSLPWIP SQVDPAKYERLVFGLILVLMMIYRPQGLIPEARHRAELEEEA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=338, Percent_Identity=39.6449704142012, Blast_Score=186, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 47272; Mature: 47141
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLSLALSLVFLALSFLAPNTLTAFLGLGALGVAAFARLEPRVRTLNLALLTLAFTLFL CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RNSGNTLGLIGLVGILVALTTLPRIPRGIRVALGLAILLLSVPIAGFANTFIFELGIQIG HCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH IFAAMSLGLNVVVGMAGLLDLGYAAFFAVGAYTWAIFGSPQAGKFLQGNFPLPGEYMYLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHH MLIAVVTTAITGLLIGLPALRLRGDYLAIVTLGLGEVVRILANNLDHPINITNGPQGITP HHHHHHHHHHHHHHHHCHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCEECCCCCCCCCC VGRPPIDWFRSLMGALGVRLDETTDYQLFFYLLVLAMIGLVVLANVNLANSRFGRAWVAI CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE REDEIAAQAMGIPLLPTKLIAFMTGAAFSGVMGVIYGAQRTFVSPESFTLLASITILAMV EHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHH ILGGMGSIPGAILGAAALTILNLDILKTFSEFVRTSLPWIPSQVDPAKYERLVFGLILVL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH MMIYRPQGLIPEARHRAELEEEA HHHHCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure SLLSLALSLVFLALSFLAPNTLTAFLGLGALGVAAFARLEPRVRTLNLALLTLAFTLFL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RNSGNTLGLIGLVGILVALTTLPRIPRGIRVALGLAILLLSVPIAGFANTFIFELGIQIG HCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH IFAAMSLGLNVVVGMAGLLDLGYAAFFAVGAYTWAIFGSPQAGKFLQGNFPLPGEYMYLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHH MLIAVVTTAITGLLIGLPALRLRGDYLAIVTLGLGEVVRILANNLDHPINITNGPQGITP HHHHHHHHHHHHHHHHCHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCEECCCCCCCCCC VGRPPIDWFRSLMGALGVRLDETTDYQLFFYLLVLAMIGLVVLANVNLANSRFGRAWVAI CCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE REDEIAAQAMGIPLLPTKLIAFMTGAAFSGVMGVIYGAQRTFVSPESFTLLASITILAMV EHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHH ILGGMGSIPGAILGAAALTILNLDILKTFSEFVRTSLPWIPSQVDPAKYERLVFGLILVL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH MMIYRPQGLIPEARHRAELEEEA HHHHCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]