Click here to switch to the map view.

The map label for this gene is 55981236

Identifier: 55981236

GI number: 55981236

Start: 1209654

End: 1210430

Strand: Direct

Name: 55981236

Synonym: TTHA1267

Alternate gene names: NA

Gene position: 1209654-1210430 (Clockwise)

Preceding gene: 55981235

Following gene: 55981238

Centisome position: 65.4

GC content: 72.72

Gene sequence:

>777_bases
ATGCGGGCCCTCCCCCACCCCCACCTCCCCGCCTTCTTCTCCGAGGGCGGGGCCCTAAGGGCCAAGGCCCTCCAGGACTA
CCTCCTCTCCCTAAGGGAGGTCTACGTCCGCTACGCCCCCCTCCCCCCGGTGCGCCTCTTCGTCCTCTCGGAAAAGGACT
GGCGGGCGAGGCTCCCCTACCCCTACGGCCTCCCCTTCCAGCACGCGGGGCCGGAGGGGCTTTCCGTCTACGCCCCCCTC
ACCTACCCGGAAAGGCTCCTCCACCGCCTGCGGGAGGTCCTCCTCCCCCTGGGGCCGCCCCCGGGGGAGATCCCGGCCTT
CTTAGACCTCAACCTGGGCCACGAGTACGCCCACGCCGTCCAGGTGGCCTGGAGGCTCCGCACCGGGGCCCGGTGGCTGG
ACGAGTTCGTGGCCAACTACCTCTTCCTCCTGGGGCTGCGAAGGGCCCGGCCGGACCTCGCGGAAGGGCTCCTCGCCTGG
AGCGAGCACCTCGCCCGGCTCGCCCCGGAGAAAAGGCGGCTTTCCGACTACGAGCGGCGCCGGGGGGGCCTCGAGGGGGC
CTTGTGGTTCCAGGCCCGGTTCACCCTGATGGCCCAGGCCCTTTGGGAGAAGGACGGCGACGGGCTCCTCCTGGCCCTCC
TGGAGGCGGCCCCCCTGGACCGGAAGCGGGGGCACCGCCTCCTCGTGGAGCGCTACCCGGAGCTCAGGGAGTGGTTCCGG
GGCTTCGGCCTCAAGGCCGCACCCGGGGGGGCGTCCTCCCCTCGGCAAGCGCCCTAA

Upstream 100 bases:

>100_bases
TCGTGGACAAGGACCCCACCCTGGACCTCCCCGAGCACCGGGCCCTCAAGGAGGAGCTCAGGGCCCAGGCGGAGCGGGTG
GGGTTCCGGGAAGTGATCTG

Downstream 100 bases:

>100_bases
GCCAGTCCAGGAAGCTCACCTCCCCCACCTTCAGGGTGTAAAGCTCGGGCCGGGGGAGGATGCAGTGCTGGCTCCCCGGG
GCGAGGTAGTAGGTGTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MRALPHPHLPAFFSEGGALRAKALQDYLLSLREVYVRYAPLPPVRLFVLSEKDWRARLPYPYGLPFQHAGPEGLSVYAPL
TYPERLLHRLREVLLPLGPPPGEIPAFLDLNLGHEYAHAVQVAWRLRTGARWLDEFVANYLFLLGLRRARPDLAEGLLAW
SEHLARLAPEKRRLSDYERRRGGLEGALWFQARFTLMAQALWEKDGDGLLLALLEAAPLDRKRGHRLLVERYPELREWFR
GFGLKAAPGGASSPRQAP

Sequences:

>Translated_258_residues
MRALPHPHLPAFFSEGGALRAKALQDYLLSLREVYVRYAPLPPVRLFVLSEKDWRARLPYPYGLPFQHAGPEGLSVYAPL
TYPERLLHRLREVLLPLGPPPGEIPAFLDLNLGHEYAHAVQVAWRLRTGARWLDEFVANYLFLLGLRRARPDLAEGLLAW
SEHLARLAPEKRRLSDYERRRGGLEGALWFQARFTLMAQALWEKDGDGLLLALLEAAPLDRKRGHRLLVERYPELREWFR
GFGLKAAPGGASSPRQAP
>Mature_258_residues
MRALPHPHLPAFFSEGGALRAKALQDYLLSLREVYVRYAPLPPVRLFVLSEKDWRARLPYPYGLPFQHAGPEGLSVYAPL
TYPERLLHRLREVLLPLGPPPGEIPAFLDLNLGHEYAHAVQVAWRLRTGARWLDEFVANYLFLLGLRRARPDLAEGLLAW
SEHLARLAPEKRRLSDYERRRGGLEGALWFQARFTLMAQALWEKDGDGLLLALLEAAPLDRKRGHRLLVERYPELREWFR
GFGLKAAPGGASSPRQAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29417; Mature: 29417

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALPHPHLPAFFSEGGALRAKALQDYLLSLREVYVRYAPLPPVRLFVLSEKDWRARLPY
CCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
PYGLPFQHAGPEGLSVYAPLTYPERLLHRLREVLLPLGPPPGEIPAFLDLNLGHEYAHAV
CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHH
QVAWRLRTGARWLDEFVANYLFLLGLRRARPDLAEGLLAWSEHLARLAPEKRRLSDYERR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RGGLEGALWFQARFTLMAQALWEKDGDGLLLALLEAAPLDRKRGHRLLVERYPELREWFR
HCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHCCCHHHHHCCHHHHHHHH
GFGLKAAPGGASSPRQAP
HCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRALPHPHLPAFFSEGGALRAKALQDYLLSLREVYVRYAPLPPVRLFVLSEKDWRARLPY
CCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCC
PYGLPFQHAGPEGLSVYAPLTYPERLLHRLREVLLPLGPPPGEIPAFLDLNLGHEYAHAV
CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHH
QVAWRLRTGARWLDEFVANYLFLLGLRRARPDLAEGLLAWSEHLARLAPEKRRLSDYERR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RGGLEGALWFQARFTLMAQALWEKDGDGLLLALLEAAPLDRKRGHRLLVERYPELREWFR
HCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHCCCHHHHHCCHHHHHHHH
GFGLKAAPGGASSPRQAP
HCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA