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The map label for this gene is ydfC [H]

Identifier: 55981232

GI number: 55981232

Start: 1204058

End: 1204912

Strand: Reverse

Name: ydfC [H]

Synonym: TTHA1263

Alternate gene names: 55981232

Gene position: 1204912-1204058 (Counterclockwise)

Preceding gene: 55981233

Following gene: 55981231

Centisome position: 65.14

GC content: 68.07

Gene sequence:

>855_bases
ATGGAGCCTAGGGCCTTAGGCGCGGCCCTCCTCACCCTCCTCTTCTGGGCCAGCGCCTTCGCCGCGATCCGCGCGGGGCT
TGAGGGCCTAGAGCCCGGCCACCTCGTCCTCCTCCGCTTCCTGGTGGCGGGGGCCCTCCTCCTCCTCTACGCCCTCTTGA
GGGGGCTTCCTCCTCCGAGGCGGGAGGACCTTCCCCGCCTTTTCCTCCTCGGGTTCTTGGGCATCACCGTCTACCACACC
GCCCTGGTCTACGGGGAGCTCACGGTGAGCGCGGGGGCGGCGAGCCTCCTCATCGCCACGGGGCCCGTATTCACCGCCCT
TCTTTCCTACTTCCTCCTGGGGGAGAGGCTGAGGCCTCTTGGGGTTTTTGGCTTCGCCCTGGCCTTCTTTGGGGCTTTGG
TTCTGGCCCTGGGGGAGGGTGGGGGGGTGCGCCTCAGCCCCGGGGCCTTTTTGATCCTCCTCGCCGCTCTCTCCACCTCC
TTCTACTTCGTCCTGCAAAAGCCCCTCTTCGGCCGTTATGGAAGCGAGGAGATGACCGTCTACACCCTGCTTCTCGGCAC
CCTGCCCCTTTTCGTCTTCCTCCCGGGGCTTCCCGAGGCCATTAGGACGGCGCCGAGGCCCGCCCTCCTCTCCGCGTTTT
ACCTCGGGGTCTTCCCCGGGGCTTTGGCCTACCTCACCTGGACCTACGCCCTCTCCCGCACCCCGGCTTCCCGCCTCTCC
TCCTTCCTCTACCTCTCGCCCCCCTTGGCCGTCCTCATCGCCTACCTGTGGCTGGGGGAGGTGCCCTCCCCCCTCTCCCT
CCTGGGCGGGGGACTCGCCCTCCTCGGGGTCCTCCTGGTGAACCTCAGGGCGTAG

Upstream 100 bases:

>100_bases
GAGGTGAAGGCCAGGGTCCAAAGGGTCACGTCCCGGGAGGTGAACGCCCTTTTGGAGCGGGGCTTCCTGGAGAAGGGGCT
TTACTACCTGGTCCTTCCCC

Downstream 100 bases:

>100_bases
AATGGGCCGGGGTGAACGCCATGGAGGTCAAGCGGATCGGCGTGGTGGGCGCGGGGCAGATGGGAAGCGGCATCGCCCAG
GTGGCGGCAAGCGCAGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MEPRALGAALLTLLFWASAFAAIRAGLEGLEPGHLVLLRFLVAGALLLLYALLRGLPPPRREDLPRLFLLGFLGITVYHT
ALVYGELTVSAGAASLLIATGPVFTALLSYFLLGERLRPLGVFGFALAFFGALVLALGEGGGVRLSPGAFLILLAALSTS
FYFVLQKPLFGRYGSEEMTVYTLLLGTLPLFVFLPGLPEAIRTAPRPALLSAFYLGVFPGALAYLTWTYALSRTPASRLS
SFLYLSPPLAVLIAYLWLGEVPSPLSLLGGGLALLGVLLVNLRA

Sequences:

>Translated_284_residues
MEPRALGAALLTLLFWASAFAAIRAGLEGLEPGHLVLLRFLVAGALLLLYALLRGLPPPRREDLPRLFLLGFLGITVYHT
ALVYGELTVSAGAASLLIATGPVFTALLSYFLLGERLRPLGVFGFALAFFGALVLALGEGGGVRLSPGAFLILLAALSTS
FYFVLQKPLFGRYGSEEMTVYTLLLGTLPLFVFLPGLPEAIRTAPRPALLSAFYLGVFPGALAYLTWTYALSRTPASRLS
SFLYLSPPLAVLIAYLWLGEVPSPLSLLGGGLALLGVLLVNLRA
>Mature_284_residues
MEPRALGAALLTLLFWASAFAAIRAGLEGLEPGHLVLLRFLVAGALLLLYALLRGLPPPRREDLPRLFLLGFLGITVYHT
ALVYGELTVSAGAASLLIATGPVFTALLSYFLLGERLRPLGVFGFALAFFGALVLALGEGGGVRLSPGAFLILLAALSTS
FYFVLQKPLFGRYGSEEMTVYTLLLGTLPLFVFLPGLPEAIRTAPRPALLSAFYLGVFPGALAYLTWTYALSRTPASRLS
SFLYLSPPLAVLIAYLWLGEVPSPLSLLGGGLALLGVLLVNLRA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30221; Mature: 30221

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPRALGAALLTLLFWASAFAAIRAGLEGLEPGHLVLLRFLVAGALLLLYALLRGLPPPR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
REDLPRLFLLGFLGITVYHTALVYGELTVSAGAASLLIATGPVFTALLSYFLLGERLRPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCHH
GVFGFALAFFGALVLALGEGGGVRLSPGAFLILLAALSTSFYFVLQKPLFGRYGSEEMTV
HHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHH
YTLLLGTLPLFVFLPGLPEAIRTAPRPALLSAFYLGVFPGALAYLTWTYALSRTPASRLS
HHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SFLYLSPPLAVLIAYLWLGEVPSPLSLLGGGLALLGVLLVNLRA
HHHHCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MEPRALGAALLTLLFWASAFAAIRAGLEGLEPGHLVLLRFLVAGALLLLYALLRGLPPPR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
REDLPRLFLLGFLGITVYHTALVYGELTVSAGAASLLIATGPVFTALLSYFLLGERLRPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCHH
GVFGFALAFFGALVLALGEGGGVRLSPGAFLILLAALSTSFYFVLQKPLFGRYGSEEMTV
HHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHH
YTLLLGTLPLFVFLPGLPEAIRTAPRPALLSAFYLGVFPGALAYLTWTYALSRTPASRLS
HHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
SFLYLSPPLAVLIAYLWLGEVPSPLSLLGGGLALLGVLLVNLRA
HHHHCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]