| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981158
Identifier: 55981158
GI number: 55981158
Start: 1135427
End: 1136215
Strand: Direct
Name: 55981158
Synonym: TTHA1189
Alternate gene names: NA
Gene position: 1135427-1136215 (Clockwise)
Preceding gene: 55981157
Following gene: 55981159
Centisome position: 61.38
GC content: 76.05
Gene sequence:
>789_bases GTGAGGGAGCACCTCCTCCCCCGCTTCCTCCTCGCCCTCCTCCTCGCCCTGGGCCTCGCCCTCGCCGCCCTCACCCGCCC CCTGGCCCCGGGCTTCGCCCTCTCCTTCTCCCCCCTCACCGCGTTTCCCCTCCACCTCGGCCACCGCCTGGGCCAGAACC TCCGGGCCGCCTGGAGCGCCCTCTCCGCGCGGCAGGACCTCCTGGCGGAGAACCAAAGGCTCAAGGAGGAGGTGGCCCGC CTTACCACGGAAAACGCCCGGCTCCGGCTAGAGGTGGCCCGGCTCGCCCGGGCCCTGGAGGTGAAGGCGGGCCAGGCCCC AGGGGTGGTGGCCGTGGCCCCCGTGGTGGCCGAGGACGCCTCCGGCCTCTACCGCAGGCTGGTCCTCGGCCTGGGGAGCC AAGACGGCCTCCGCCCCGGGATGCCCGTGACCGCCCCCCAGGGCCTCGTGGGCCTGGTGGTGGAGGTGGAGGCGCACCGC GCCCTGGTGCGCACCCTCCTGGATCCGGAAAGCCGGGTGGGGGTCCGGGTGGGGGAGAAGCCGGGCCGGGGCGTGGCCCG GGGCGCCCCCCCGGGGCTTCTCGTGGCCGAGTTTCCCCCCACGGTGGCGGTGGCGCCGGGGGACCTCCTCCTCACCGGGG CCACCCTGGGCCTCTTCCCGGACGGGATCCCCGTGGGCCGGGTGGAACGGGTGGAACGGGCCCAAGGCGGCCTCAAGGTG CGGGCCTGGGCCAGGCCCCTGGTGGACCTCTCCCTCCTGGAGGAGGTGGTGGTCCTGAGGCCCCTCTAG
Upstream 100 bases:
>100_bases GCATGGCCCTCCTGGAGCGGGTGGAGGGGGACTTCTACACCGTGGTGGGCCTCCCCGTCTCCCGGGTCTTCGCCCTCCTC TGGGCGCGGGGGTTCAGGCC
Downstream 100 bases:
>100_bases AGGTGGCGCCGTGGCCTTGGTCTACCTGGTCCTCCTCCTCTTCCTTTCGGGCCTCCTCCAGGCCCTCCTCCCCGAGGGCT GGCCCGCCCCGGACCTCTTC
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Rod Shape-Determining Protein Mrec
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MREHLLPRFLLALLLALGLALAALTRPLAPGFALSFSPLTAFPLHLGHRLGQNLRAAWSALSARQDLLAENQRLKEEVAR LTTENARLRLEVARLARALEVKAGQAPGVVAVAPVVAEDASGLYRRLVLGLGSQDGLRPGMPVTAPQGLVGLVVEVEAHR ALVRTLLDPESRVGVRVGEKPGRGVARGAPPGLLVAEFPPTVAVAPGDLLLTGATLGLFPDGIPVGRVERVERAQGGLKV RAWARPLVDLSLLEEVVVLRPL
Sequences:
>Translated_262_residues MREHLLPRFLLALLLALGLALAALTRPLAPGFALSFSPLTAFPLHLGHRLGQNLRAAWSALSARQDLLAENQRLKEEVAR LTTENARLRLEVARLARALEVKAGQAPGVVAVAPVVAEDASGLYRRLVLGLGSQDGLRPGMPVTAPQGLVGLVVEVEAHR ALVRTLLDPESRVGVRVGEKPGRGVARGAPPGLLVAEFPPTVAVAPGDLLLTGATLGLFPDGIPVGRVERVERAQGGLKV RAWARPLVDLSLLEEVVVLRPL >Mature_262_residues MREHLLPRFLLALLLALGLALAALTRPLAPGFALSFSPLTAFPLHLGHRLGQNLRAAWSALSARQDLLAENQRLKEEVAR LTTENARLRLEVARLARALEVKAGQAPGVVAVAPVVAEDASGLYRRLVLGLGSQDGLRPGMPVTAPQGLVGLVVEVEAHR ALVRTLLDPESRVGVRVGEKPGRGVARGAPPGLLVAEFPPTVAVAPGDLLLTGATLGLFPDGIPVGRVERVERAQGGLKV RAWARPLVDLSLLEEVVVLRPL
Specific function: Unknown
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27764; Mature: 27764
Theoretical pI: Translated: 11.38; Mature: 11.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREHLLPRFLLALLLALGLALAALTRPLAPGFALSFSPLTAFPLHLGHRLGQNLRAAWSA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH LSARQDLLAENQRLKEEVARLTTENARLRLEVARLARALEVKAGQAPGVVAVAPVVAEDA HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHH SGLYRRLVLGLGSQDGLRPGMPVTAPQGLVGLVVEVEAHRALVRTLLDPESRVGVRVGEK HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCHHCCEEECCC PGRGVARGAPPGLLVAEFPPTVAVAPGDLLLTGATLGLFPDGIPVGRVERVERAQGGLKV CCCCCCCCCCCCEEEECCCCCEEECCCCEEEECCHHHCCCCCCCCHHHHHHHHHHCCEEE RAWARPLVDLSLLEEVVVLRPL EEHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MREHLLPRFLLALLLALGLALAALTRPLAPGFALSFSPLTAFPLHLGHRLGQNLRAAWSA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH LSARQDLLAENQRLKEEVARLTTENARLRLEVARLARALEVKAGQAPGVVAVAPVVAEDA HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHH SGLYRRLVLGLGSQDGLRPGMPVTAPQGLVGLVVEVEAHRALVRTLLDPESRVGVRVGEK HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCHHCCEEECCC PGRGVARGAPPGLLVAEFPPTVAVAPGDLLLTGATLGLFPDGIPVGRVERVERAQGGLKV CCCCCCCCCCCCEEEECCCCCEEECCCCEEEECCHHHCCCCCCCCHHHHHHHHHHCCEEE RAWARPLVDLSLLEEVVVLRPL EEHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA