| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is pld [H]
Identifier: 55981156
GI number: 55981156
Start: 1133761
End: 1134891
Strand: Direct
Name: pld [H]
Synonym: TTHA1187
Alternate gene names: 55981156
Gene position: 1133761-1134891 (Clockwise)
Preceding gene: 55981155
Following gene: 55981157
Centisome position: 61.29
GC content: 68.26
Gene sequence:
>1131_bases TTGGCTACTAGGAGGCGCCGGGGCAGGAAGGCGATCGCCGGGCTTCCCGGCTACCTCCTCCTCCTGGTCCTCGTCCTGGT CTGGCTCTTCCAAGAGCTCCGGCCGGGCCCCGCCCCGCCCGCCGAGACGGGAGAGGCCGAGGTCTACTTCATGCCGGAGG AAGGGCCGAGGGCCAAGGCTCGCCTCCTCGCCCTCATGGACGGGGCCCGGGAAAGCCTGGAAGGAGCCTTCTACGAGTTC CGCGACCTGGAGGTCGCCCAGGGCCTCCTCCGGGCCAAGGCGCGGGGGGTGAGGGTGCGGCTTTACGGGGAAAGCGACTA CCGGGAGGACTTCCGCCGCTATTTGGTGGCGGCGAGCCTGGGCCAGAGGGAGGAGCCCCCGAGGGTCCGCTTCGCCGAGC TCAAGGAGCGGGTCAGGCCCCTCTCCCTGGACTGCGAGGAGGTCGCGGGGATCCCCATCTGCTACGACGAGCGGGAAGGC TTCATGCACCACAAGTTCCTGGTGGTGGACGGGAGGGCCGTCTGGACGGGGAGCACCAACATGACCTGGAACGCCTTCGC CCGGAACAACGAGAACAGCCTCCTCCTCCCCTCCCCCACCCTGGCCCAGGGGTACGCGCGGGAGTTTGAGGCCCTCTTCG GCGGACAGAAGGAAGGCCTCGGCCAGCCCGTGGCCTTCGCCCTGGAGGCGGTGGAGGGCGTGGCCTACTTCAGCCCAAGG GGAGGGAGGCTCGCCCGGGAAGCCCTCCTGAAGCGGCTTTCCGAGGCCCAAAGGGAGGTCTTGGTGGCGGCCTTCGTCCT CACGGACCGGGAACTGGTGGAAGCCCTTAAGGAAGCCCACGGCCGGGGTCTTTCCGTCCGGATCCTTTTGGAAAGGCGCA ACCTGGGGGACAGCCGGGAGGAGGACCTCCTTAGGGCGGGCGTCCCCGTGCGCCAGGACGCCAACCCCTACACCATGCAC CACAAGGTCATGGTCCTGGACGGCACCTACGTGGTCACCGGGAGCTACAACTTCTCCGTCCGGGCCCACGAGGTGAACAA CGAGAACCTCCTCGTGCTCAAAAGCCCGAGCCTGGCGGAGCGCTACCGGAAGGAGGTGTTGCGGCTTTGGGAAGCGGGAA GCCCCCTCTGA
Upstream 100 bases:
>100_bases ATCCGGGACCGGGAGACCGCCCTGAGGATGCTGAAGGCCGGGGCGAGCCGCCTCGGGACCTCCAGCGGCGTGGCCCTGGT GGCGGGGGAAGGGGGGACCC
Downstream 100 bases:
>100_bases TCCTGGCCTCGGGAAGCCCCAGGCGGAAAGCCCTCCTCGAGGCCCTGGGCTACCCCATCCGGGTTGCGGTCCCCGGGGTG GAGGAAGAGGGCCTCCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: PLD; Choline phosphatase [H]
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MATRRRRGRKAIAGLPGYLLLLVLVLVWLFQELRPGPAPPAETGEAEVYFMPEEGPRAKARLLALMDGARESLEGAFYEF RDLEVAQGLLRAKARGVRVRLYGESDYREDFRRYLVAASLGQREEPPRVRFAELKERVRPLSLDCEEVAGIPICYDEREG FMHHKFLVVDGRAVWTGSTNMTWNAFARNNENSLLLPSPTLAQGYAREFEALFGGQKEGLGQPVAFALEAVEGVAYFSPR GGRLAREALLKRLSEAQREVLVAAFVLTDRELVEALKEAHGRGLSVRILLERRNLGDSREEDLLRAGVPVRQDANPYTMH HKVMVLDGTYVVTGSYNFSVRAHEVNNENLLVLKSPSLAERYRKEVLRLWEAGSPL
Sequences:
>Translated_376_residues MATRRRRGRKAIAGLPGYLLLLVLVLVWLFQELRPGPAPPAETGEAEVYFMPEEGPRAKARLLALMDGARESLEGAFYEF RDLEVAQGLLRAKARGVRVRLYGESDYREDFRRYLVAASLGQREEPPRVRFAELKERVRPLSLDCEEVAGIPICYDEREG FMHHKFLVVDGRAVWTGSTNMTWNAFARNNENSLLLPSPTLAQGYAREFEALFGGQKEGLGQPVAFALEAVEGVAYFSPR GGRLAREALLKRLSEAQREVLVAAFVLTDRELVEALKEAHGRGLSVRILLERRNLGDSREEDLLRAGVPVRQDANPYTMH HKVMVLDGTYVVTGSYNFSVRAHEVNNENLLVLKSPSLAERYRKEVLRLWEAGSPL >Mature_375_residues ATRRRRGRKAIAGLPGYLLLLVLVLVWLFQELRPGPAPPAETGEAEVYFMPEEGPRAKARLLALMDGARESLEGAFYEFR DLEVAQGLLRAKARGVRVRLYGESDYREDFRRYLVAASLGQREEPPRVRFAELKERVRPLSLDCEEVAGIPICYDEREGF MHHKFLVVDGRAVWTGSTNMTWNAFARNNENSLLLPSPTLAQGYAREFEALFGGQKEGLGQPVAFALEAVEGVAYFSPRG GRLAREALLKRLSEAQREVLVAAFVLTDRELVEALKEAHGRGLSVRILLERRNLGDSREEDLLRAGVPVRQDANPYTMHH KVMVLDGTYVVTGSYNFSVRAHEVNNENLLVLKSPSLAERYRKEVLRLWEAGSPL
Specific function: Could be a virulence factor [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PLD phosphodiesterase domain [H]
Homologues:
Organism=Homo sapiens, GI270265812, Length=116, Percent_Identity=31.0344827586207, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001736 [H]
Pfam domain/function: NA
EC number: =3.1.4.4 [H]
Molecular weight: Translated: 42362; Mature: 42231
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRRRRGRKAIAGLPGYLLLLVLVLVWLFQELRPGPAPPAETGEAEVYFMPEEGPRAKA CCCCHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHH RLLALMDGARESLEGAFYEFRDLEVAQGLLRAKARGVRVRLYGESDYREDFRRYLVAASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHC GQREEPPRVRFAELKERVRPLSLDCEEVAGIPICYDEREGFMHHKFLVVDGRAVWTGSTN CCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCEEECCCCCCEEEEEEEEECEEEEECCCC MTWNAFARNNENSLLLPSPTLAQGYAREFEALFGGQKEGLGQPVAFALEAVEGVAYFSPR CEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEECCC GGRLAREALLKRLSEAQREVLVAAFVLTDRELVEALKEAHGRGLSVRILLERRNLGDSRE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHH EDLLRAGVPVRQDANPYTMHHKVMVLDGTYVVTGSYNFSVRAHEVNNENLLVLKSPSLAE HHHHHCCCCCCCCCCCEEEEEEEEEEECEEEEEECEEEEEEEEEECCCCEEEEECCHHHH RYRKEVLRLWEAGSPL HHHHHHHHHHHCCCCC >Mature Secondary Structure ATRRRRGRKAIAGLPGYLLLLVLVLVWLFQELRPGPAPPAETGEAEVYFMPEEGPRAKA CCCHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHH RLLALMDGARESLEGAFYEFRDLEVAQGLLRAKARGVRVRLYGESDYREDFRRYLVAASL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHC GQREEPPRVRFAELKERVRPLSLDCEEVAGIPICYDEREGFMHHKFLVVDGRAVWTGSTN CCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCEEECCCCCCEEEEEEEEECEEEEECCCC MTWNAFARNNENSLLLPSPTLAQGYAREFEALFGGQKEGLGQPVAFALEAVEGVAYFSPR CEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEECCC GGRLAREALLKRLSEAQREVLVAAFVLTDRELVEALKEAHGRGLSVRILLERRNLGDSRE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHH EDLLRAGVPVRQDANPYTMHHKVMVLDGTYVVTGSYNFSVRAHEVNNENLLVLKSPSLAE HHHHHCCCCCCCCCCCEEEEEEEEEEECEEEEEECEEEEEEEEEECCCCEEEEECCHHHH RYRKEVLRLWEAGSPL HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]