| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is glnP [H]
Identifier: 55981139
GI number: 55981139
Start: 1114585
End: 1115370
Strand: Reverse
Name: glnP [H]
Synonym: TTHA1170
Alternate gene names: 55981139
Gene position: 1115370-1114585 (Counterclockwise)
Preceding gene: 55981140
Following gene: 55981138
Centisome position: 60.3
GC content: 68.96
Gene sequence:
>786_bases ATGCGGTACCTCCGCTTTTTCGCCCTCTTCCTTCTCCTCGTCCTCGGGTATTTCGCCCTCTTCCACGCCCTCTCCTGGGC TTTGGAGCGCTACTTCCTCCTCACGGGCTTCGGCCCCGAGCGGGCGGCCTCCGCCGGGCGGATCATGGCCCAGGGGGCCG AGGTGACCCTGAAGCTCACCCTCCTCTCGGGGGCGGCGGGGCTCGTCATCGGCGTCTTCGCCGGGATGGCGCGGCTTTCC GCCCGGGCCTGGGTGCGCCTGCCTGCCGCCTTCTACATCTGGGTCATCCGGGGTACGCCCCTTCTCGTCCAGATCCTCTT CGCCTACAACGCCCTTCCCCTCCTCCTCCAGCCCCTCTGGCCGGGGGCGCAGCAGGCCCTCACCCCCTACTGGGCGGCCT TCATCGCCCTCGCCTTCAACGTGGGGGCCTACAACGCCGAGGTGGTCCGCGCCGGCATCCAGGCGATCCCCAAGGGGCAG TGGGAGGCCGCTTGGTCCTTGGGGTTTTCCGCCGCGGACACCATGCGCTTCGTCATCCTGCCCCAGGCCCTGAGGATCGT GGTGCCCCCCTTGGTCAACAACGTGGTGGCCCTCCTCAAGGACTCCTCCCTGGCGAGCGTCATCACCCTCTTGGAGCTCG CCCTCTCCGGCCAGCGCATCATCTCCGCCACCTTCCGCCCCGTGGAGGTCTACTTGGCGGTGGCCGCGGTCTACCTCCTC CTCACCACCCTCCTCACCTTCTTCACCAACCTCCTGGAGCGGCGCCTCGCCCTGCCCGGCCGCTAA
Upstream 100 bases:
>100_bases AGAAGTGGTTCGGGGAGGACGTCCGCTGCAAGTGACCCTGCCGCGCCCGGACGCCCAAAGGCCCTAAAGGCCCTAGGCCG TCCGGGCCCCTTTTCGCCCC
Downstream 100 bases:
>100_bases GTGCCCCACCTGCGGCGAAATCCACGTGCGGACACTTAGTAAACTGGGCTTAGCATGGACCTGCCCAAGGCCTACGATCC CAAGTCCGTGGAGCCCAAGT
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MRYLRFFALFLLLVLGYFALFHALSWALERYFLLTGFGPERAASAGRIMAQGAEVTLKLTLLSGAAGLVIGVFAGMARLS ARAWVRLPAAFYIWVIRGTPLLVQILFAYNALPLLLQPLWPGAQQALTPYWAAFIALAFNVGAYNAEVVRAGIQAIPKGQ WEAAWSLGFSAADTMRFVILPQALRIVVPPLVNNVVALLKDSSLASVITLLELALSGQRIISATFRPVEVYLAVAAVYLL LTTLLTFFTNLLERRLALPGR
Sequences:
>Translated_261_residues MRYLRFFALFLLLVLGYFALFHALSWALERYFLLTGFGPERAASAGRIMAQGAEVTLKLTLLSGAAGLVIGVFAGMARLS ARAWVRLPAAFYIWVIRGTPLLVQILFAYNALPLLLQPLWPGAQQALTPYWAAFIALAFNVGAYNAEVVRAGIQAIPKGQ WEAAWSLGFSAADTMRFVILPQALRIVVPPLVNNVVALLKDSSLASVITLLELALSGQRIISATFRPVEVYLAVAAVYLL LTTLLTFFTNLLERRLALPGR >Mature_261_residues MRYLRFFALFLLLVLGYFALFHALSWALERYFLLTGFGPERAASAGRIMAQGAEVTLKLTLLSGAAGLVIGVFAGMARLS ARAWVRLPAAFYIWVIRGTPLLVQILFAYNALPLLLQPLWPGAQQALTPYWAAFIALAFNVGAYNAEVVRAGIQAIPKGQ WEAAWSLGFSAADTMRFVILPQALRIVVPPLVNNVVALLKDSSLASVITLLELALSGQRIISATFRPVEVYLAVAAVYLL LTTLLTFFTNLLERRLALPGR
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=42.4528301886792, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1788226, Length=206, Percent_Identity=41.2621359223301, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI1786874, Length=218, Percent_Identity=29.3577981651376, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788645, Length=209, Percent_Identity=31.1004784688995, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87082239, Length=210, Percent_Identity=34.2857142857143, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1786873, Length=207, Percent_Identity=31.8840579710145, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788646, Length=214, Percent_Identity=30.3738317757009, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI48994930, Length=171, Percent_Identity=35.672514619883, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787086, Length=212, Percent_Identity=33.9622641509434, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787087, Length=226, Percent_Identity=27.4336283185841, Blast_Score=80, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28581; Mature: 28581
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLRFFALFLLLVLGYFALFHALSWALERYFLLTGFGPERAASAGRIMAQGAEVTLKLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCCEEEEEEE LLSGAAGLVIGVFAGMARLSARAWVRLPAAFYIWVIRGTPLLVQILFAYNALPLLLQPLW EECCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHCCHHHHHHCCC PGAQQALTPYWAAFIALAFNVGAYNAEVVRAGIQAIPKGQWEAAWSLGFSAADTMRFVIL CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHH PQALRIVVPPLVNNVVALLKDSSLASVITLLELALSGQRIISATFRPVEVYLAVAAVYLL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LTTLLTFFTNLLERRLALPGR HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRYLRFFALFLLLVLGYFALFHALSWALERYFLLTGFGPERAASAGRIMAQGAEVTLKLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCCEEEEEEE LLSGAAGLVIGVFAGMARLSARAWVRLPAAFYIWVIRGTPLLVQILFAYNALPLLLQPLW EECCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHCCHHHHHHCCC PGAQQALTPYWAAFIALAFNVGAYNAEVVRAGIQAIPKGQWEAAWSLGFSAADTMRFVIL CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHH PQALRIVVPPLVNNVVALLKDSSLASVITLLELALSGQRIISATFRPVEVYLAVAAVYLL HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LTTLLTFFTNLLERRLALPGR HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]