Click here to switch to the map view.

The map label for this gene is yrkP [H]

Identifier: 55981111

GI number: 55981111

Start: 1086288

End: 1086644

Strand: Reverse

Name: yrkP [H]

Synonym: TTHA1142

Alternate gene names: 55981111

Gene position: 1086644-1086288 (Counterclockwise)

Preceding gene: 55981112

Following gene: 55981110

Centisome position: 58.75

GC content: 71.43

Gene sequence:

>357_bases
ATGGCCCGCATCCTGGTGATTGAGGACGAGCCCCTGGTGGGGCACATGCTCCGCCGCTTTCTGGAGCGGGCAGGGCACGA
GGTGGTCTGGGCCCCGAACGGGGAGGTGGGCCTTAGGCGCCTGGCCGAAGGGTTTGACCTCGTGGTGTGTGACCTCATCA
TGCCCGGGATCCCCGGGGAGGAGGTGATCCGCCGCATCCGGGAGGAGGCGGGGCCGCCGGTCCTCGCCGTCTCGGCCAGC
GTCTCCCGGGAAAGCCAGCGCCGGGCCCTCGAGGCCGGGGCCCAGGCCTTCCTGGGCAAGCCCTTTGAGGCCCAGGCCTT
CCTGCGGGTGGTGGAGGGGCTTCTCCGGGGGACATAG

Upstream 100 bases:

>100_bases
CTCTTCATCTCCAAGCACATCGTGGAGGCCCACGGGGGGCGGATAGAGGTGGAGAGCGAGGAGGGAAAGGGGAGCCTCTT
CCGGGTTATCCTGCCCCTGT

Downstream 100 bases:

>100_bases
GTCCCCAAGGTCTCGGTGTAGGCTAGGAGCGATGCTTGGCCTCACTTCAGAAGAAGCGAAGAAAAGGCTCAGGGAGTACG
GGCCAAACGCCTTGCCCGAG

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MARILVIEDEPLVGHMLRRFLERAGHEVVWAPNGEVGLRRLAEGFDLVVCDLIMPGIPGEEVIRRIREEAGPPVLAVSAS
VSRESQRRALEAGAQAFLGKPFEAQAFLRVVEGLLRGT

Sequences:

>Translated_118_residues
MARILVIEDEPLVGHMLRRFLERAGHEVVWAPNGEVGLRRLAEGFDLVVCDLIMPGIPGEEVIRRIREEAGPPVLAVSAS
VSRESQRRALEAGAQAFLGKPFEAQAFLRVVEGLLRGT
>Mature_117_residues
ARILVIEDEPLVGHMLRRFLERAGHEVVWAPNGEVGLRRLAEGFDLVVCDLIMPGIPGEEVIRRIREEAGPPVLAVSASV
SRESQRRALEAGAQAFLGKPFEAQAFLRVVEGLLRGT

Specific function: Member of the two-component regulatory system yrkQ/yrkP [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=116, Percent_Identity=34.4827586206897, Blast_Score=67, Evalue=2e-13,
Organism=Escherichia coli, GI1789402, Length=118, Percent_Identity=33.8983050847458, Blast_Score=63, Evalue=6e-12,
Organism=Escherichia coli, GI1789809, Length=116, Percent_Identity=33.6206896551724, Blast_Score=63, Evalue=7e-12,
Organism=Escherichia coli, GI87082012, Length=115, Percent_Identity=29.5652173913043, Blast_Score=62, Evalue=1e-11,
Organism=Escherichia coli, GI1786911, Length=114, Percent_Identity=38.5964912280702, Blast_Score=61, Evalue=2e-11,
Organism=Escherichia coli, GI1788394, Length=115, Percent_Identity=30.4347826086957, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 12967; Mature: 12836

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARILVIEDEPLVGHMLRRFLERAGHEVVWAPNGEVGLRRLAEGFDLVVCDLIMPGIPGE
CCEEEEEECCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCHHHHHHHHCCCCCHH
EVIRRIREEAGPPVLAVSASVSRESQRRALEAGAQAFLGKPFEAQAFLRVVEGLLRGT
HHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARILVIEDEPLVGHMLRRFLERAGHEVVWAPNGEVGLRRLAEGFDLVVCDLIMPGIPGE
CEEEEEECCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCHHHHHHHHCCCCCHH
EVIRRIREEAGPPVLAVSASVSRESQRRALEAGAQAFLGKPFEAQAFLRVVEGLLRGT
HHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]