Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

Click here to switch to the map view.

The map label for this gene is yfhR [C]

Identifier: 55981097

GI number: 55981097

Start: 1071092

End: 1071976

Strand: Reverse

Name: yfhR [C]

Synonym: TTHA1128

Alternate gene names: 55981097

Gene position: 1071976-1071092 (Counterclockwise)

Preceding gene: 55981098

Following gene: 55981096

Centisome position: 57.95

GC content: 69.83

Gene sequence:

>885_bases
ATGCGCCTCGGGCTTTGGCTTTCCTTCCTCCTCCTCCCGGCCCTGGCCCAGGTCCTCACCCTCCCTGACCTTCGGGCGCG
GACCTACGGGGAGGGAGGGTTTCGCGTGGAGCGGGTCCTGGAGGAGAGGCCGGCCTTCACCCGGGTCCAGTTCTCCTACC
TTTCGGACGGCCTCCGGGTCCACGGGTTCGCCAACCTGCCCAAAGGAAGGGGCCCCTTCCCCGTGGTGGTGGTCCTTCAC
GGCTACGTGGAGCCGAGCCGCTACCGCCTCCTCGCCTACACCACCCCCTACGCCGACTTCCTGGCGGAAAGGGGCTACCT
CGTCCTCCACCCGAACTTTCGGGGCCACCCCCCTTCCGAAGGTGCCCCGGCCCAAGGCCTCCGCCACGTCTACGCCGTGG
ACGTGCTGAACCTCCTCGCCGAGGTGCGCCGGGGAGCCTTCCCCCAGGCGGACCCCGCCCGCATCGCCCTCTTCGGCCAC
TCCATGGGGGGCGGCGTCGCCCAGATCGTGAGCCTGGTGGACCCCGGCCTTAAGGGCGCGGTCCTCTACGGGAGCATGAG
CGGGGACGAAAGACGCAACCTGGAGCGCATCCGCTACTGGTCCGGGGGAAGCCGGGGACAGGAGCTTTTCGCCCTTTCCC
CGGAGGTCCTCCGCCAGGCCTCGGCCTGGACCTACCTGGCGGAGCTCTCCGTGCCCTACAGCGTCCACCACGGCACCCAG
GACGCCCAGGTGCCCCCAGAGTGGTCCTGGGAGCTCTGCCGCAGGCTCAAGGCCCTGAAAAAGCCCGTGGAGTGCTTCAG
CTACCCCGGGGGGCACCTCTTTCGGGGGGAGGTGGACCGGGTCTTCCGGGAGCGGGTGTTGGCCTTCCTGGGCCGGGTGC
TATAG

Upstream 100 bases:

>100_bases
TCGTCTACCACGCCATCGGCCTGAAAGGGCTTCAGGCGGGCTGGCTTTCCCGGGAGGTGGACCACATTTAGCCCGAGGGG
TTTCCCCTTAGCCTGGGGGC

Downstream 100 bases:

>100_bases
GCTTGGGCCGTGCGGGCGTTTTTGGAGCACCTTTCCGCCCTCTTCTTCGCCCTGGCCTTCGGCGCCCTGGTCTTCGGGGT
TCTCGCCCGGCTTCTCGGCG

Product: peptidase

Products: NA

Alternate protein names: Dienelactone Hydrolase; Acylamino-Acid-Releasing; Dipeptidyl Peptidase IV-Related Protein; Phospholipase/Carboxylesterase; Dipeptidylaminopeptidase/Acylaminoacyl-Peptidase; Peptidase S

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MRLGLWLSFLLLPALAQVLTLPDLRARTYGEGGFRVERVLEERPAFTRVQFSYLSDGLRVHGFANLPKGRGPFPVVVVLH
GYVEPSRYRLLAYTTPYADFLAERGYLVLHPNFRGHPPSEGAPAQGLRHVYAVDVLNLLAEVRRGAFPQADPARIALFGH
SMGGGVAQIVSLVDPGLKGAVLYGSMSGDERRNLERIRYWSGGSRGQELFALSPEVLRQASAWTYLAELSVPYSVHHGTQ
DAQVPPEWSWELCRRLKALKKPVECFSYPGGHLFRGEVDRVFRERVLAFLGRVL

Sequences:

>Translated_294_residues
MRLGLWLSFLLLPALAQVLTLPDLRARTYGEGGFRVERVLEERPAFTRVQFSYLSDGLRVHGFANLPKGRGPFPVVVVLH
GYVEPSRYRLLAYTTPYADFLAERGYLVLHPNFRGHPPSEGAPAQGLRHVYAVDVLNLLAEVRRGAFPQADPARIALFGH
SMGGGVAQIVSLVDPGLKGAVLYGSMSGDERRNLERIRYWSGGSRGQELFALSPEVLRQASAWTYLAELSVPYSVHHGTQ
DAQVPPEWSWELCRRLKALKKPVECFSYPGGHLFRGEVDRVFRERVLAFLGRVL
>Mature_294_residues
MRLGLWLSFLLLPALAQVLTLPDLRARTYGEGGFRVERVLEERPAFTRVQFSYLSDGLRVHGFANLPKGRGPFPVVVVLH
GYVEPSRYRLLAYTTPYADFLAERGYLVLHPNFRGHPPSEGAPAQGLRHVYAVDVLNLLAEVRRGAFPQADPARIALFGH
SMGGGVAQIVSLVDPGLKGAVLYGSMSGDERRNLERIRYWSGGSRGQELFALSPEVLRQASAWTYLAELSVPYSVHHGTQ
DAQVPPEWSWELCRRLKALKKPVECFSYPGGHLFRGEVDRVFRERVLAFLGRVL

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32879; Mature: 32879

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGLWLSFLLLPALAQVLTLPDLRARTYGEGGFRVERVLEERPAFTRVQFSYLSDGLRV
CCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHCCCHHEEEHHHHCCCCEE
HGFANLPKGRGPFPVVVVLHGYVEPSRYRLLAYTTPYADFLAERGYLVLHPNFRGHPPSE
EEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCHHHHHHHCCEEEECCCCCCCCCCC
GAPAQGLRHVYAVDVLNLLAEVRRGAFPQADPARIALFGHSMGGGVAQIVSLVDPGLKGA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCE
VLYGSMSGDERRNLERIRYWSGGSRGQELFALSPEVLRQASAWTYLAELSVPYSVHHGTQ
EEEECCCCHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEECCCCC
DAQVPPEWSWELCRRLKALKKPVECFSYPGGHLFRGEVDRVFRERVLAFLGRVL
CCCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLGLWLSFLLLPALAQVLTLPDLRARTYGEGGFRVERVLEERPAFTRVQFSYLSDGLRV
CCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHCCCHHEEEHHHHCCCCEE
HGFANLPKGRGPFPVVVVLHGYVEPSRYRLLAYTTPYADFLAERGYLVLHPNFRGHPPSE
EEECCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCHHHHHHHCCEEEECCCCCCCCCCC
GAPAQGLRHVYAVDVLNLLAEVRRGAFPQADPARIALFGHSMGGGVAQIVSLVDPGLKGA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCE
VLYGSMSGDERRNLERIRYWSGGSRGQELFALSPEVLRQASAWTYLAELSVPYSVHHGTQ
EEEECCCCHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEEECCCCC
DAQVPPEWSWELCRRLKALKKPVECFSYPGGHLFRGEVDRVFRERVLAFLGRVL
CCCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA