| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981095
Identifier: 55981095
GI number: 55981095
Start: 1070009
End: 1070911
Strand: Reverse
Name: 55981095
Synonym: TTHA1126
Alternate gene names: NA
Gene position: 1070911-1070009 (Counterclockwise)
Preceding gene: 55981096
Following gene: 55981094
Centisome position: 57.9
GC content: 67.88
Gene sequence:
>903_bases GTGGCCAAGCGCGTGGTTTCCGTCTCCTTGGGCAGCAGCCGCCGGGACGCCGCGGCCGAGGTGGAGCTTTTGGGGGAGCG GGTCCTCTTGGAGCGGCGGGGGACGGACGGGGATTTCCAAAGGGCCCTCTGCCTCATCCAGGAGCTGGACGGCAAGGTGG ACGCCATCGGCCTGGGCGGGATTGACCTTTACCTCTTCGCCGGAGGGCGGCGGTACGCCATCCGGGACGCCCTGAGGCTC AAGGAGGCGGCCAAGAAGACCCCCGTGGTGGACGGCTCCGGCCTCAAGCACACCTTGGAGAGGCGGGCGGTGCGGGAGCT CGCCTCCCTTATAGACTGGAGGAAGACCAAGGTCCTCCTGCCCTCGGCCGTGGACCGGTTCGGCCTCGCCGAGGCCTTGG ACGAGGCGGGGGCGAGGGTGCTCTACGGGGACTTCATCTTTGCCCTGGGTCTGCCCATCCCCCTCTACAGCCTCTCCTTC CTGCAGAAGCTCGCCTTCCTCCTCCTTCCCCTCTTCACCCGCCTGCCCTTTTCCGTCCTCTACCCCACGGGGAAGAAGCA GGAGGAGGTGCGGGAGGACTGGCGCGCCCGCTACTACGCCTGGGCCGACGTGGTGGCCGGGGACTGGCACTACGTTCGGC GCCACATGCCCAAGGACATGCGGGGCAAGACGGTCATCACCAACACCACCACGGAGGAGGACGTGGCCTTCCTCCGGGAG CGGGGGGTGAGGCGCCTCGTCACCACCACCCCGAGGCTTGGCGGCCGGAGCTTTGGGACCAACGTGATGGAGGCCATGCT GGTCGCCCTCGCGGGGCGGGAGCTCGGGGAGGCGGACTACCTCCGCTATATTGACCAAATAGGGCTGAAGCCCCAGGTGT TGGAACTGGAGGGACAGGCATGA
Upstream 100 bases:
>100_bases TCTCGCCCGGCTTCTCGGCGCCGGGCGCTCCTGGCTTTTCTTCCTCCTCGCCCTCCTCCTCTTTCTCCTCGGACTCTTTT GGGGTGTAAAATAGCCCCCC
Downstream 100 bases:
>100_bases TCAGCGTGACGGATCTGCGACCCGGAACCAAGGTGAAGATGGACGGCGGCCTTTGGGAGTGCGTGGAGTACCAGCACCAG AAGCTGGGCCGCGGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Dehydrogenase-Like Protein; Dehydrogenase-Like; Dehydrogenase
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MAKRVVSVSLGSSRRDAAAEVELLGERVLLERRGTDGDFQRALCLIQELDGKVDAIGLGGIDLYLFAGGRRYAIRDALRL KEAAKKTPVVDGSGLKHTLERRAVRELASLIDWRKTKVLLPSAVDRFGLAEALDEAGARVLYGDFIFALGLPIPLYSLSF LQKLAFLLLPLFTRLPFSVLYPTGKKQEEVREDWRARYYAWADVVAGDWHYVRRHMPKDMRGKTVITNTTTEEDVAFLRE RGVRRLVTTTPRLGGRSFGTNVMEAMLVALAGRELGEADYLRYIDQIGLKPQVLELEGQA
Sequences:
>Translated_300_residues MAKRVVSVSLGSSRRDAAAEVELLGERVLLERRGTDGDFQRALCLIQELDGKVDAIGLGGIDLYLFAGGRRYAIRDALRL KEAAKKTPVVDGSGLKHTLERRAVRELASLIDWRKTKVLLPSAVDRFGLAEALDEAGARVLYGDFIFALGLPIPLYSLSF LQKLAFLLLPLFTRLPFSVLYPTGKKQEEVREDWRARYYAWADVVAGDWHYVRRHMPKDMRGKTVITNTTTEEDVAFLRE RGVRRLVTTTPRLGGRSFGTNVMEAMLVALAGRELGEADYLRYIDQIGLKPQVLELEGQA >Mature_299_residues AKRVVSVSLGSSRRDAAAEVELLGERVLLERRGTDGDFQRALCLIQELDGKVDAIGLGGIDLYLFAGGRRYAIRDALRLK EAAKKTPVVDGSGLKHTLERRAVRELASLIDWRKTKVLLPSAVDRFGLAEALDEAGARVLYGDFIFALGLPIPLYSLSFL QKLAFLLLPLFTRLPFSVLYPTGKKQEEVREDWRARYYAWADVVAGDWHYVRRHMPKDMRGKTVITNTTTEEDVAFLRER GVRRLVTTTPRLGGRSFGTNVMEAMLVALAGRELGEADYLRYIDQIGLKPQVLELEGQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33608; Mature: 33477
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRVVSVSLGSSRRDAAAEVELLGERVLLERRGTDGDFQRALCLIQELDGKVDAIGLGG CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECC IDLYLFAGGRRYAIRDALRLKEAAKKTPVVDGSGLKHTLERRAVRELASLIDWRKTKVLL EEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEC PSAVDRFGLAEALDEAGARVLYGDFIFALGLPIPLYSLSFLQKLAFLLLPLFTRLPFSVL HHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE YPTGKKQEEVREDWRARYYAWADVVAGDWHYVRRHMPKDMRGKTVITNTTTEEDVAFLRE CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHH RGVRRLVTTTPRLGGRSFGTNVMEAMLVALAGRELGEADYLRYIDQIGLKPQVLELEGQA CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCC >Mature Secondary Structure AKRVVSVSLGSSRRDAAAEVELLGERVLLERRGTDGDFQRALCLIQELDGKVDAIGLGG CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECC IDLYLFAGGRRYAIRDALRLKEAAKKTPVVDGSGLKHTLERRAVRELASLIDWRKTKVLL EEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEC PSAVDRFGLAEALDEAGARVLYGDFIFALGLPIPLYSLSFLQKLAFLLLPLFTRLPFSVL HHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE YPTGKKQEEVREDWRARYYAWADVVAGDWHYVRRHMPKDMRGKTVITNTTTEEDVAFLRE CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHH RGVRRLVTTTPRLGGRSFGTNVMEAMLVALAGRELGEADYLRYIDQIGLKPQVLELEGQA CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA