| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981085
Identifier: 55981085
GI number: 55981085
Start: 1062691
End: 1063227
Strand: Direct
Name: 55981085
Synonym: TTHA1116
Alternate gene names: NA
Gene position: 1062691-1063227 (Clockwise)
Preceding gene: 55981084
Following gene: 55981087
Centisome position: 57.45
GC content: 69.65
Gene sequence:
>537_bases ATGCCTAAGGACTGGGACGCCTTCTACCGCAACGCCCCGGAAGACCGCCCCCCGGCCTTCGTGGTGCGGGCCTACGGCCC CTTCGTCCCCCAGGGTCCCGTGTTGGACCTGGCGGGGGGCCTGGGGCGGAACGCCCGTTACTTCCTGCAAAGGGGCCACC CCGTGGTCCTGGTGGAAAGGAGCCGGGAAGCCCTAAGGCGGCTTTCGGGCACGCCGGGCCTTACCCTGGTGGCCCTGGAC CTGGAAGGGGCGGACGCCCCCCAAAGCCTCCCCCAGGGGCCCTTCGCCGGGATCGTGATGGCCTACTACGTGAACCGCCC CCTCCTCCAAGGCCTCGCCCCCCTCCTCCTCCCCGGGGGGCTGGTGCTTGTGGAGGGCTTCTCCCGGAAGGAGGCCCTGA GGCGGGGAAGGCCCCATAGTCCCTTCTACTGGGAAGGGGAAGAACTCCTCACCCCTCCCCCGGGCCTGGCCTTAAGGGCC TTTGGGGAGGGGTGGATGGAAGGGTACCGGGTCTACGCCGTCTACCTCAGGCCTTGA
Upstream 100 bases:
>100_bases CTCCACCGCCCCGGACTCGCCCTCGCCCTCCCCAAGGCGGTCTTCCGGGGAGGGACCTGCCTCATCCTCACCGTAGGGGG CCTCCTCGCCTTCCGCAAGG
Downstream 100 bases:
>100_bases GGCCCCGGGCCACGAGCTCGGCGATGTCCAGGACCTCGAGGGGCTTCTCGTCCTGGGCCACCTCCACGTTCATCATGGCC ATGCAGAAGGGGCACCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MPKDWDAFYRNAPEDRPPAFVVRAYGPFVPQGPVLDLAGGLGRNARYFLQRGHPVVLVERSREALRRLSGTPGLTLVALD LEGADAPQSLPQGPFAGIVMAYYVNRPLLQGLAPLLLPGGLVLVEGFSRKEALRRGRPHSPFYWEGEELLTPPPGLALRA FGEGWMEGYRVYAVYLRP
Sequences:
>Translated_178_residues MPKDWDAFYRNAPEDRPPAFVVRAYGPFVPQGPVLDLAGGLGRNARYFLQRGHPVVLVERSREALRRLSGTPGLTLVALD LEGADAPQSLPQGPFAGIVMAYYVNRPLLQGLAPLLLPGGLVLVEGFSRKEALRRGRPHSPFYWEGEELLTPPPGLALRA FGEGWMEGYRVYAVYLRP >Mature_177_residues PKDWDAFYRNAPEDRPPAFVVRAYGPFVPQGPVLDLAGGLGRNARYFLQRGHPVVLVERSREALRRLSGTPGLTLVALDL EGADAPQSLPQGPFAGIVMAYYVNRPLLQGLAPLLLPGGLVLVEGFSRKEALRRGRPHSPFYWEGEELLTPPPGLALRAF GEGWMEGYRVYAVYLRP
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19680; Mature: 19549
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKDWDAFYRNAPEDRPPAFVVRAYGPFVPQGPVLDLAGGLGRNARYFLQRGHPVVLVER CCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCHHHHHHCCCEEEEEEC SREALRRLSGTPGLTLVALDLEGADAPQSLPQGPFAGIVMAYYVNRPLLQGLAPLLLPGG CHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCC LVLVEGFSRKEALRRGRPHSPFYWEGEELLTPPPGLALRAFGEGWMEGYRVYAVYLRP EEEEECCCHHHHHHCCCCCCCCEECCCEECCCCCCCEEHHHHHHHHCCEEEEEEEECC >Mature Secondary Structure PKDWDAFYRNAPEDRPPAFVVRAYGPFVPQGPVLDLAGGLGRNARYFLQRGHPVVLVER CCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCHHHHHHCCCEEEEEEC SREALRRLSGTPGLTLVALDLEGADAPQSLPQGPFAGIVMAYYVNRPLLQGLAPLLLPGG CHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCC LVLVEGFSRKEALRRGRPHSPFYWEGEELLTPPPGLALRAFGEGWMEGYRVYAVYLRP EEEEECCCHHHHHHCCCCCCCCEECCCEECCCCCCCEEHHHHHHHHCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA