Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

Click here to switch to the map view.

The map label for this gene is 55981070

Identifier: 55981070

GI number: 55981070

Start: 1048679

End: 1049539

Strand: Reverse

Name: 55981070

Synonym: TTHA1101

Alternate gene names: NA

Gene position: 1049539-1048679 (Counterclockwise)

Preceding gene: 55981071

Following gene: 55981069

Centisome position: 56.74

GC content: 70.15

Gene sequence:

>861_bases
ATGAAGCGGATGGCATGGGTGCTCTTGGGCATGGCCTTGGTCTTCGCGGCCTCGGAGGTGCGGGTGATCCGGGTGGAGGG
AGGGCGGCTTTCCGGGGACCTCCGCTACGGCCCCTGGGTCTTTGAGGGGGAGGTGCGGGGGCGGGTGAAGGACCTCACCA
TCCTCGCCCCCAAGGCCACCCTCATCGCCCCGAAGGGGAAGACCATGCAGGAGGCGGAGGGGGAGAGGGAGGCCCGGTTT
GAGGGGGGCGTGGTGGTGCGGAGGGGCCGGGTGGAGGCCCGGGGGCCCGCCCTCGTCTACCGGGAAAGCACCGGGGAAGG
GGTTCTCCTGGGCCCGGCCCGCATGCGCCAGGAGCCCAAGCCCGGGGAGGATCCCGTGGAGGTGGAGGCGGCCCGGATGA
CCTTCCAGGTGGACACCGACACCTCCACCAGCGAAAACGCCCTCCTCAAGAGCGGCAACCAGGAGGGGCGGGCGGGGCTT
GTGTACTACGAGGAGGAGCGGGGCCTCGCCGTCTTCACCGACCCCAAGGAGGTGGTCCTCGTCCGCAAGCGCAAGGACGG
GGACCTGAGGATTCGGGCCAAGGAGGTGCGGAGCCTCACCGGCCCCAAAAGGCTCATCGCCACCGGGGGGGTGGTCCTCG
AGGACGGCGACCTCGTGACCCGGGGGGAGAGCCTCTACTACGACGACACCACCGGGGAGGCCATCGTCTTGGGGAGGCCC
GCCGTGAGCGAGAACGCGAAGGAGGGCTTCCGGCTTTCCGGGGGAACCCTCCTCCACAACGTGAACCGCCACCAGGTCCG
CGTCTACGGCCGCGCCTTCCGCCTGCCCCTGGAGGAGTTCAAGAAGCTCGGGGAGAGGTAG

Upstream 100 bases:

>100_bases
GCTCCGACTTCGCCCTGGAGCGGATTGAGGCGGAAAACCCTCGGTTTGAGTTCCCCGCCGGGGGGAGCTTCGGACCTTGC
CAAGTGGAAGGAGGAAGCGG

Downstream 100 bases:

>100_bases
GTGCCCTGGCTTAGGCTCTCCCTCCTCGCTCTCCTCGGCCTCTCCCTCGTCCTGGCCCAGGAGGTCTACCGCCCAGAGGT
GGAGCTCGTCCGCAAGGACA

Product: hypothetical protein

Products: NA

Alternate protein names: OstA-Like Protein Protein

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKRMAWVLLGMALVFAASEVRVIRVEGGRLSGDLRYGPWVFEGEVRGRVKDLTILAPKATLIAPKGKTMQEAEGEREARF
EGGVVVRRGRVEARGPALVYRESTGEGVLLGPARMRQEPKPGEDPVEVEAARMTFQVDTDTSTSENALLKSGNQEGRAGL
VYYEEERGLAVFTDPKEVVLVRKRKDGDLRIRAKEVRSLTGPKRLIATGGVVLEDGDLVTRGESLYYDDTTGEAIVLGRP
AVSENAKEGFRLSGGTLLHNVNRHQVRVYGRAFRLPLEEFKKLGER

Sequences:

>Translated_286_residues
MKRMAWVLLGMALVFAASEVRVIRVEGGRLSGDLRYGPWVFEGEVRGRVKDLTILAPKATLIAPKGKTMQEAEGEREARF
EGGVVVRRGRVEARGPALVYRESTGEGVLLGPARMRQEPKPGEDPVEVEAARMTFQVDTDTSTSENALLKSGNQEGRAGL
VYYEEERGLAVFTDPKEVVLVRKRKDGDLRIRAKEVRSLTGPKRLIATGGVVLEDGDLVTRGESLYYDDTTGEAIVLGRP
AVSENAKEGFRLSGGTLLHNVNRHQVRVYGRAFRLPLEEFKKLGER
>Mature_286_residues
MKRMAWVLLGMALVFAASEVRVIRVEGGRLSGDLRYGPWVFEGEVRGRVKDLTILAPKATLIAPKGKTMQEAEGEREARF
EGGVVVRRGRVEARGPALVYRESTGEGVLLGPARMRQEPKPGEDPVEVEAARMTFQVDTDTSTSENALLKSGNQEGRAGL
VYYEEERGLAVFTDPKEVVLVRKRKDGDLRIRAKEVRSLTGPKRLIATGGVVLEDGDLVTRGESLYYDDTTGEAIVLGRP
AVSENAKEGFRLSGGTLLHNVNRHQVRVYGRAFRLPLEEFKKLGER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31605; Mature: 31605

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMAWVLLGMALVFAASEVRVIRVEGGRLSGDLRYGPWVFEGEVRGRVKDLTILAPKAT
CCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCEECCEEEECCCCCEEEEEEEECCCEE
LIAPKGKTMQEAEGEREARFEGGVVVRRGRVEARGPALVYRESTGEGVLLGPARMRQEPK
EECCCCCCHHHHCCCCHHCCCCCEEEEECCCCCCCCEEEEECCCCCEEEECHHHHCCCCC
PGEDPVEVEAARMTFQVDTDTSTSENALLKSGNQEGRAGLVYYEEERGLAVFTDPKEVVL
CCCCCCEEEEEEEEEEEECCCCCCCCHHHHCCCCCCCEEEEEEECCCCEEEEECCCEEEE
VRKRKDGDLRIRAKEVRSLTGPKRLIATGGVVLEDGDLVTRGESLYYDDTTGEAIVLGRP
EEECCCCCEEEEHHHHHCCCCCCEEEEECCEEEECCCEEECCCEEEEECCCCCEEEEECC
AVSENAKEGFRLSGGTLLHNVNRHQVRVYGRAFRLPLEEFKKLGER
CCCCCCCCCEEECCCEEEECCCCEEEEEEEEEEECCHHHHHHHCCC
>Mature Secondary Structure
MKRMAWVLLGMALVFAASEVRVIRVEGGRLSGDLRYGPWVFEGEVRGRVKDLTILAPKAT
CCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCEECCEEEECCCCCEEEEEEEECCCEE
LIAPKGKTMQEAEGEREARFEGGVVVRRGRVEARGPALVYRESTGEGVLLGPARMRQEPK
EECCCCCCHHHHCCCCHHCCCCCEEEEECCCCCCCCEEEEECCCCCEEEECHHHHCCCCC
PGEDPVEVEAARMTFQVDTDTSTSENALLKSGNQEGRAGLVYYEEERGLAVFTDPKEVVL
CCCCCCEEEEEEEEEEEECCCCCCCCHHHHCCCCCCCEEEEEEECCCCEEEEECCCEEEE
VRKRKDGDLRIRAKEVRSLTGPKRLIATGGVVLEDGDLVTRGESLYYDDTTGEAIVLGRP
EEECCCCCEEEEHHHHHCCCCCCEEEEECCEEEECCCEEECCCEEEEECCCCCEEEEECC
AVSENAKEGFRLSGGTLLHNVNRHQVRVYGRAFRLPLEEFKKLGER
CCCCCCCCCEEECCCEEEECCCCEEEEEEEEEEECCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA