| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981070
Identifier: 55981070
GI number: 55981070
Start: 1048679
End: 1049539
Strand: Reverse
Name: 55981070
Synonym: TTHA1101
Alternate gene names: NA
Gene position: 1049539-1048679 (Counterclockwise)
Preceding gene: 55981071
Following gene: 55981069
Centisome position: 56.74
GC content: 70.15
Gene sequence:
>861_bases ATGAAGCGGATGGCATGGGTGCTCTTGGGCATGGCCTTGGTCTTCGCGGCCTCGGAGGTGCGGGTGATCCGGGTGGAGGG AGGGCGGCTTTCCGGGGACCTCCGCTACGGCCCCTGGGTCTTTGAGGGGGAGGTGCGGGGGCGGGTGAAGGACCTCACCA TCCTCGCCCCCAAGGCCACCCTCATCGCCCCGAAGGGGAAGACCATGCAGGAGGCGGAGGGGGAGAGGGAGGCCCGGTTT GAGGGGGGCGTGGTGGTGCGGAGGGGCCGGGTGGAGGCCCGGGGGCCCGCCCTCGTCTACCGGGAAAGCACCGGGGAAGG GGTTCTCCTGGGCCCGGCCCGCATGCGCCAGGAGCCCAAGCCCGGGGAGGATCCCGTGGAGGTGGAGGCGGCCCGGATGA CCTTCCAGGTGGACACCGACACCTCCACCAGCGAAAACGCCCTCCTCAAGAGCGGCAACCAGGAGGGGCGGGCGGGGCTT GTGTACTACGAGGAGGAGCGGGGCCTCGCCGTCTTCACCGACCCCAAGGAGGTGGTCCTCGTCCGCAAGCGCAAGGACGG GGACCTGAGGATTCGGGCCAAGGAGGTGCGGAGCCTCACCGGCCCCAAAAGGCTCATCGCCACCGGGGGGGTGGTCCTCG AGGACGGCGACCTCGTGACCCGGGGGGAGAGCCTCTACTACGACGACACCACCGGGGAGGCCATCGTCTTGGGGAGGCCC GCCGTGAGCGAGAACGCGAAGGAGGGCTTCCGGCTTTCCGGGGGAACCCTCCTCCACAACGTGAACCGCCACCAGGTCCG CGTCTACGGCCGCGCCTTCCGCCTGCCCCTGGAGGAGTTCAAGAAGCTCGGGGAGAGGTAG
Upstream 100 bases:
>100_bases GCTCCGACTTCGCCCTGGAGCGGATTGAGGCGGAAAACCCTCGGTTTGAGTTCCCCGCCGGGGGGAGCTTCGGACCTTGC CAAGTGGAAGGAGGAAGCGG
Downstream 100 bases:
>100_bases GTGCCCTGGCTTAGGCTCTCCCTCCTCGCTCTCCTCGGCCTCTCCCTCGTCCTGGCCCAGGAGGTCTACCGCCCAGAGGT GGAGCTCGTCCGCAAGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: OstA-Like Protein Protein
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKRMAWVLLGMALVFAASEVRVIRVEGGRLSGDLRYGPWVFEGEVRGRVKDLTILAPKATLIAPKGKTMQEAEGEREARF EGGVVVRRGRVEARGPALVYRESTGEGVLLGPARMRQEPKPGEDPVEVEAARMTFQVDTDTSTSENALLKSGNQEGRAGL VYYEEERGLAVFTDPKEVVLVRKRKDGDLRIRAKEVRSLTGPKRLIATGGVVLEDGDLVTRGESLYYDDTTGEAIVLGRP AVSENAKEGFRLSGGTLLHNVNRHQVRVYGRAFRLPLEEFKKLGER
Sequences:
>Translated_286_residues MKRMAWVLLGMALVFAASEVRVIRVEGGRLSGDLRYGPWVFEGEVRGRVKDLTILAPKATLIAPKGKTMQEAEGEREARF EGGVVVRRGRVEARGPALVYRESTGEGVLLGPARMRQEPKPGEDPVEVEAARMTFQVDTDTSTSENALLKSGNQEGRAGL VYYEEERGLAVFTDPKEVVLVRKRKDGDLRIRAKEVRSLTGPKRLIATGGVVLEDGDLVTRGESLYYDDTTGEAIVLGRP AVSENAKEGFRLSGGTLLHNVNRHQVRVYGRAFRLPLEEFKKLGER >Mature_286_residues MKRMAWVLLGMALVFAASEVRVIRVEGGRLSGDLRYGPWVFEGEVRGRVKDLTILAPKATLIAPKGKTMQEAEGEREARF EGGVVVRRGRVEARGPALVYRESTGEGVLLGPARMRQEPKPGEDPVEVEAARMTFQVDTDTSTSENALLKSGNQEGRAGL VYYEEERGLAVFTDPKEVVLVRKRKDGDLRIRAKEVRSLTGPKRLIATGGVVLEDGDLVTRGESLYYDDTTGEAIVLGRP AVSENAKEGFRLSGGTLLHNVNRHQVRVYGRAFRLPLEEFKKLGER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31605; Mature: 31605
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRMAWVLLGMALVFAASEVRVIRVEGGRLSGDLRYGPWVFEGEVRGRVKDLTILAPKAT CCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCEECCEEEECCCCCEEEEEEEECCCEE LIAPKGKTMQEAEGEREARFEGGVVVRRGRVEARGPALVYRESTGEGVLLGPARMRQEPK EECCCCCCHHHHCCCCHHCCCCCEEEEECCCCCCCCEEEEECCCCCEEEECHHHHCCCCC PGEDPVEVEAARMTFQVDTDTSTSENALLKSGNQEGRAGLVYYEEERGLAVFTDPKEVVL CCCCCCEEEEEEEEEEEECCCCCCCCHHHHCCCCCCCEEEEEEECCCCEEEEECCCEEEE VRKRKDGDLRIRAKEVRSLTGPKRLIATGGVVLEDGDLVTRGESLYYDDTTGEAIVLGRP EEECCCCCEEEEHHHHHCCCCCCEEEEECCEEEECCCEEECCCEEEEECCCCCEEEEECC AVSENAKEGFRLSGGTLLHNVNRHQVRVYGRAFRLPLEEFKKLGER CCCCCCCCCEEECCCEEEECCCCEEEEEEEEEEECCHHHHHHHCCC >Mature Secondary Structure MKRMAWVLLGMALVFAASEVRVIRVEGGRLSGDLRYGPWVFEGEVRGRVKDLTILAPKAT CCHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCEECCEEEECCCCCEEEEEEEECCCEE LIAPKGKTMQEAEGEREARFEGGVVVRRGRVEARGPALVYRESTGEGVLLGPARMRQEPK EECCCCCCHHHHCCCCHHCCCCCEEEEECCCCCCCCEEEEECCCCCEEEECHHHHCCCCC PGEDPVEVEAARMTFQVDTDTSTSENALLKSGNQEGRAGLVYYEEERGLAVFTDPKEVVL CCCCCCEEEEEEEEEEEECCCCCCCCHHHHCCCCCCCEEEEEEECCCCEEEEECCCEEEE VRKRKDGDLRIRAKEVRSLTGPKRLIATGGVVLEDGDLVTRGESLYYDDTTGEAIVLGRP EEECCCCCEEEEHHHHHCCCCCCEEEEECCEEEECCCEEECCCEEEEECCCCCEEEEECC AVSENAKEGFRLSGGTLLHNVNRHQVRVYGRAFRLPLEEFKKLGER CCCCCCCCCEEECCCEEEECCCCEEEEEEEEEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA