| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981026
Identifier: 55981026
GI number: 55981026
Start: 1001982
End: 1002524
Strand: Direct
Name: 55981026
Synonym: TTHA1057
Alternate gene names: NA
Gene position: 1001982-1002524 (Clockwise)
Preceding gene: 55981025
Following gene: 55981027
Centisome position: 54.17
GC content: 65.75
Gene sequence:
>543_bases ATGGCGGAACCCCTCGGCCACTACCAGGAGCAGCGGGTAGGGGTGTTCGTGGACACCCAGAACCTCTACCACTCGGCCCG GGACTACTACGAGCGCAACGTCAACTTTGAGAGCCTCCTGCGCTTCGCCGTGGGGGGAAGACGTCTGGTGCGGGCCACCG CCTACGTGGTGGAGAAGGAGGGGGACACCTCCGCCTGGCCCTTCATCTACAAGCTTTCCACCATCGGGTACAAGGTCCGC CGGATGTACCTCACGGTGAAGGAGACGGGGGAAGGCGGGCGGCCCATCTACTCCGGCAACTGGGACATGGGCATCGCCGC CGACATGGTCCGGCTCATGCCCTACCTGGACGTGGTGGTCCTGGGGAGCGGGGACGGGGACTTCGTGGAGATCCTCGAGG TCCTGATGGAGCGGGGCATCCGGGTGGAGGTGATCGCCTTCCGGGAGACCACGGCCCAGCGGCTCATTGACGCCGTGGAC CGCTTCACCCACCTCCCCGAGATCCCCGGGGCCTTCATGGAACCCAAAAACGCTGAGCGCTAG
Upstream 100 bases:
>100_bases CATGGTGGAGGCGGAGGAGGGGGCGGAGGAGGTGGCGCGGGAGCTCGCCGAGCGCGTCCGGGCCCTCTCCCAAGAGGCCC AGGCGGTATGATGGACCCCG
Downstream 100 bases:
>100_bases CCGTGGAAGGCCTGGAAGCCTACGACTACCACCTCCCTCCCGAGCAGATCGCCCAGGAAGGGGTGGAGCCCAGGGACATG GCCCGGCTGATGGTGGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MAEPLGHYQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAWPFIYKLSTIGYKVR RMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGSGDGDFVEILEVLMERGIRVEVIAFRETTAQRLIDAVD RFTHLPEIPGAFMEPKNAER
Sequences:
>Translated_180_residues MAEPLGHYQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAWPFIYKLSTIGYKVR RMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGSGDGDFVEILEVLMERGIRVEVIAFRETTAQRLIDAVD RFTHLPEIPGAFMEPKNAER >Mature_179_residues AEPLGHYQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAWPFIYKLSTIGYKVRR MYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGSGDGDFVEILEVLMERGIRVEVIAFRETTAQRLIDAVDR FTHLPEIPGAFMEPKNAER
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20561; Mature: 20430
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPLGHYQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKE CCCCCCCHHHHCEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHEEECC GDTSAWPFIYKLSTIGYKVRRMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVV CCCCCCHHEEHHHHHHHEEEHEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHEEEE LGSGDGDFVEILEVLMERGIRVEVIAFRETTAQRLIDAVDRFTHLPEIPGAFMEPKNAER EECCCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AEPLGHYQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKE CCCCCCHHHHCEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHEEECC GDTSAWPFIYKLSTIGYKVRRMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVV CCCCCCHHEEHHHHHHHEEEHEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHEEEE LGSGDGDFVEILEVLMERGIRVEVIAFRETTAQRLIDAVDRFTHLPEIPGAFMEPKNAER EECCCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA