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The map label for this gene is int [H]

Identifier: 55980996

GI number: 55980996

Start: 976892

End: 978067

Strand: Direct

Name: int [H]

Synonym: TTHA1027

Alternate gene names: 55980996

Gene position: 976892-978067 (Clockwise)

Preceding gene: 55980995

Following gene: 55980997

Centisome position: 52.81

GC content: 69.98

Gene sequence:

>1176_bases
ATGAGAAGGCGCGGCAAAGGGGGCGGAAGCGTCTTCTACCACGAGGGCAAGGGCAAGTGGGTGGCCCAGCTCACCTGGAT
AGACCCCGCCACGGGCCGGAAGGTCAAGCGGGAGAAGCATTGCGAAACCCGCAAGGAGGCCGAAAGGGCCCTGGCGGATA
TGGTGGTCGCCCAGGCCAAAGGGCTTCTCACCGACCCCTCCAGGCTCACCACGCGGGACTTCGCCCTGGACTACCTGAAG
CGCCTGGAGCGGGAGGGGCTTAGGCCGAACTCCATCCGCCTGGCCCAGGAGGAACTGGCCCACGCCCTCCCCTCCCTCAA
GGATCCCAAGGCCCACGACCCCCTGGGCCGCATGCGGCTCCAGGAGGTGAAGCCGGTCCATGTGCGGGCCGCCGTGGACC
GGGTGGCGGAAGCGGGCTACGCCCCCCGCACCGTGGGCCGGGTGCTCATGCGGCTCAAGGCCCTCTTCCGGGAAGCCTTA
CGGCTGGAGCTTGTGGCCCGGAACCCCGCCGAGGCCGTGAGGTTGCGCCTTCCCAAGGGGGAGAAGACGGCCCGGGCCCT
GGAGCCCCAGGAGGTGGCCCGGCTCCTGGAGACCGCCGAAGCCTCCCGGTCCAAGGACATGGCCCTCCTCCTCCGGCTCA
TGCTGGAAACCGGGCTCCGCCGGGGCGAAGCCCTGGCCCTGCAATGGCGGGACATAGACCTGGAGGCTGGGGAGCTTACC
GTGTGGCGGTCCTGGACAAAAGCGAGGGGCAAGGGGGCCTTCTCCGAGCCCAAGACCCCCACGGCCAAGCGCAAGGTGCC
CTTGCCCCGTGGCCTCCTCCTTCGCCTGAAGGCCCGGAGGGAGGAGCTTCTGGAAAGGCTCACCCCGGAGGAGGTGGACG
GGCTCTTCCTGGTGGGCGGGGTGAAGCCCGTGGACCCGGACGCGTTCAACCACTACCTGCGCCGCCTGGCGGAAAGGGCG
GGCCTTGGGCGGGTGAGGGTGCACGACCTTCGCCACACCTGGGCCACCCTGGCCCTCTCCCGGGGCGTGCCCCTGGAGGT
GGTGAGTGAGCGGCTTGGCCACGCCAGCCCCACCATCACCCTGAATGTGTACCGCCACCTTCTGGAGGAGGAGCGCCGGG
GGTGGGTGCTGGACCTGGAAGAACTCCTCTACCCCGCCCCCCGCGCCCAAGCCTGA

Upstream 100 bases:

>100_bases
GCTTCGCCAAAGCCCTCTCCCGGGGCCGGGTGGGCAAGCGGTGGGCCCTACGCCGGGCCCGGTGGCTTTGGCGCAAGGGA
AGGAAGCGTAGGAGGTGGTG

Downstream 100 bases:

>100_bases
GCGGATAGACCGGCTGATAAACCGGCTAAAGCAAATCCCCCCACGCTACCGTGGGGGGAAGCTTTGTGTTCTGATGCTGG
TGGGCGGCGTAGGACTTGAA

Product: DNA integration/recombination/invertion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MRRRGKGGGSVFYHEGKGKWVAQLTWIDPATGRKVKREKHCETRKEAERALADMVVAQAKGLLTDPSRLTTRDFALDYLK
RLEREGLRPNSIRLAQEELAHALPSLKDPKAHDPLGRMRLQEVKPVHVRAAVDRVAEAGYAPRTVGRVLMRLKALFREAL
RLELVARNPAEAVRLRLPKGEKTARALEPQEVARLLETAEASRSKDMALLLRLMLETGLRRGEALALQWRDIDLEAGELT
VWRSWTKARGKGAFSEPKTPTAKRKVPLPRGLLLRLKARREELLERLTPEEVDGLFLVGGVKPVDPDAFNHYLRRLAERA
GLGRVRVHDLRHTWATLALSRGVPLEVVSERLGHASPTITLNVYRHLLEEERRGWVLDLEELLYPAPRAQA

Sequences:

>Translated_391_residues
MRRRGKGGGSVFYHEGKGKWVAQLTWIDPATGRKVKREKHCETRKEAERALADMVVAQAKGLLTDPSRLTTRDFALDYLK
RLEREGLRPNSIRLAQEELAHALPSLKDPKAHDPLGRMRLQEVKPVHVRAAVDRVAEAGYAPRTVGRVLMRLKALFREAL
RLELVARNPAEAVRLRLPKGEKTARALEPQEVARLLETAEASRSKDMALLLRLMLETGLRRGEALALQWRDIDLEAGELT
VWRSWTKARGKGAFSEPKTPTAKRKVPLPRGLLLRLKARREELLERLTPEEVDGLFLVGGVKPVDPDAFNHYLRRLAERA
GLGRVRVHDLRHTWATLALSRGVPLEVVSERLGHASPTITLNVYRHLLEEERRGWVLDLEELLYPAPRAQA
>Mature_391_residues
MRRRGKGGGSVFYHEGKGKWVAQLTWIDPATGRKVKREKHCETRKEAERALADMVVAQAKGLLTDPSRLTTRDFALDYLK
RLEREGLRPNSIRLAQEELAHALPSLKDPKAHDPLGRMRLQEVKPVHVRAAVDRVAEAGYAPRTVGRVLMRLKALFREAL
RLELVARNPAEAVRLRLPKGEKTARALEPQEVARLLETAEASRSKDMALLLRLMLETGLRRGEALALQWRDIDLEAGELT
VWRSWTKARGKGAFSEPKTPTAKRKVPLPRGLLLRLKARREELLERLTPEEVDGLFLVGGVKPVDPDAFNHYLRRLAERA
GLGRVRVHDLRHTWATLALSRGVPLEVVSERLGHASPTITLNVYRHLLEEERRGWVLDLEELLYPAPRAQA

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44302; Mature: 44302

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRGKGGGSVFYHEGKGKWVAQLTWIDPATGRKVKREKHCETRKEAERALADMVVAQAK
CCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLLTDPSRLTTRDFALDYLKRLEREGLRPNSIRLAQEELAHALPSLKDPKAHDPLGRMRL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
QEVKPVHVRAAVDRVAEAGYAPRTVGRVLMRLKALFREALRLELVARNPAEAVRLRLPKG
HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEECCCC
EKTARALEPQEVARLLETAEASRSKDMALLLRLMLETGLRRGEALALQWRDIDLEAGELT
CHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEE
VWRSWTKARGKGAFSEPKTPTAKRKVPLPRGLLLRLKARREELLERLTPEEVDGLFLVGG
EEHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECC
VKPVDPDAFNHYLRRLAERAGLGRVRVHDLRHTWATLALSRGVPLEVVSERLGHASPTIT
CCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEE
LNVYRHLLEEERRGWVLDLEELLYPAPRAQA
HHHHHHHHHHHHCCCEEEHHHHHCCCCCCCC
>Mature Secondary Structure
MRRRGKGGGSVFYHEGKGKWVAQLTWIDPATGRKVKREKHCETRKEAERALADMVVAQAK
CCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLLTDPSRLTTRDFALDYLKRLEREGLRPNSIRLAQEELAHALPSLKDPKAHDPLGRMRL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
QEVKPVHVRAAVDRVAEAGYAPRTVGRVLMRLKALFREALRLELVARNPAEAVRLRLPKG
HHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEECCCC
EKTARALEPQEVARLLETAEASRSKDMALLLRLMLETGLRRGEALALQWRDIDLEAGELT
CHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEE
VWRSWTKARGKGAFSEPKTPTAKRKVPLPRGLLLRLKARREELLERLTPEEVDGLFLVGG
EEHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECC
VKPVDPDAFNHYLRRLAERAGLGRVRVHDLRHTWATLALSRGVPLEVVSERLGHASPTIT
CCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEE
LNVYRHLLEEERRGWVLDLEELLYPAPRAQA
HHHHHHHHHHHHCCCEEEHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]