| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is 55980992
Identifier: 55980992
GI number: 55980992
Start: 973272
End: 973607
Strand: Direct
Name: 55980992
Synonym: TTHA1023
Alternate gene names: NA
Gene position: 973272-973607 (Clockwise)
Preceding gene: 55980991
Following gene: 55980993
Centisome position: 52.62
GC content: 73.81
Gene sequence:
>336_bases GTGAGCCCATGGCGGAAGCTCATCACCCTGGCCCCGGCCTTGGCCGCCAAGGTGCGCGCCATGCGCCCGCCCAAGCTCCG GGTGGTGGCCGATGGCCGGGTGCTCTACTGGGCCCTGGCCCTCCCCTCGGAGGAGGACCTGGAGGCCCACGCCGCCTGGC CCGGGCAGAACGCCCCGAGCCTCGAGGCCTGGCTGGTGGAGCGGCTGGCCTTCCTGGAGGAGGCCTGGCCGGAAGTGAAG GAGGTGGAGCTTCTGGGGCTTTGGGCCGGAAACCCGCCCCGGCTTGAGCCCATCGCCCGGGCCCGGGTGAAGCGGCGTGA GGAGGTGGGGGCGTGA
Upstream 100 bases:
>100_bases CACGCGCCCTGGCGGAGGTGGCCCAAGGGCTTGGGGGGCGCGTCTTTCGCATCACCGCCCCCCGCCCCCGGCCCGAGGAA GACGAGGTGGAGGTGGAGCT
Downstream 100 bases:
>100_bases GGCGCGTGCGCGTTTTCCCGGGAACGCCGTCCTGGACGGGAGGGAGAACGCGCACGCACCCTGTGCCGTCCAGGACGGCA CTCCTTTCCCATGCGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MSPWRKLITLAPALAAKVRAMRPPKLRVVADGRVLYWALALPSEEDLEAHAAWPGQNAPSLEAWLVERLAFLEEAWPEVK EVELLGLWAGNPPRLEPIARARVKRREEVGA
Sequences:
>Translated_111_residues MSPWRKLITLAPALAAKVRAMRPPKLRVVADGRVLYWALALPSEEDLEAHAAWPGQNAPSLEAWLVERLAFLEEAWPEVK EVELLGLWAGNPPRLEPIARARVKRREEVGA >Mature_110_residues SPWRKLITLAPALAAKVRAMRPPKLRVVADGRVLYWALALPSEEDLEAHAAWPGQNAPSLEAWLVERLAFLEEAWPEVKE VELLGLWAGNPPRLEPIARARVKRREEVGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12465; Mature: 12333
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPWRKLITLAPALAAKVRAMRPPKLRVVADGRVLYWALALPSEEDLEAHAAWPGQNAPS CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCC LEAWLVERLAFLEEAWPEVKEVELLGLWAGNPPRLEPIARARVKRREEVGA HHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SPWRKLITLAPALAAKVRAMRPPKLRVVADGRVLYWALALPSEEDLEAHAAWPGQNAPS CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCC LEAWLVERLAFLEEAWPEVKEVELLGLWAGNPPRLEPIARARVKRREEVGA HHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA