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The map label for this gene is 55980988

Identifier: 55980988

GI number: 55980988

Start: 967287

End: 967652

Strand: Reverse

Name: 55980988

Synonym: TTHA1019

Alternate gene names: NA

Gene position: 967652-967287 (Counterclockwise)

Preceding gene: 55980989

Following gene: 55980987

Centisome position: 52.31

GC content: 56.83

Gene sequence:

>366_bases
ATGACTCCGGAGCTAGTCCGAGAACTAATCGCACGGGGCGAAGCCTTGACCCTTGAGTTCAAAGGGGAAGAGAGAAGGCA
ACTCTCCGAAAACGATCTGGTGGAAACGGTCGTATGCATGGCCAACCGCCCTACACAAGAGATGGGCTACGTCCTCATTG
GCGTTGAGGATGATGGCCGGGTGACGGGTGCCCGTCCCCGGGATGCCGGGGGTATAGATCCCTTGCGCATTCAGGCTTTG
ATCGCAAACCGGACGCGTCCTTCCCTCAGTTGCCGCGTTTGGGTGGTTGAGCTTGAAGGCAAGCCTGTGCTCGTGATCGA
GGTGCCACGGTCGTGTAAGGATTTATGTGTAAGGGTCCGTGTTTAA

Upstream 100 bases:

>100_bases
CCAAAGAGGTGGTGGACGTGGTGCGCTACGTGGTCAACGACTGGAAGAAGGCGGCGGAGAGCAGCTAATCCAATGGCACC
AGAGGAGGGCAACCGATCCA

Downstream 100 bases:

>100_bases
TAGGGGGGCACACCTTGGAACGAGGAGGTGCCCCGTGGACCAGGATACCTTGCGGATCTTGCTGAGGGAAGCGGTGCGGG
AGACGGTGGCCGAGGTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: AAA-4 Family Protein

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MTPELVRELIARGEALTLEFKGEERRQLSENDLVETVVCMANRPTQEMGYVLIGVEDDGRVTGARPRDAGGIDPLRIQAL
IANRTRPSLSCRVWVVELEGKPVLVIEVPRSCKDLCVRVRV

Sequences:

>Translated_121_residues
MTPELVRELIARGEALTLEFKGEERRQLSENDLVETVVCMANRPTQEMGYVLIGVEDDGRVTGARPRDAGGIDPLRIQAL
IANRTRPSLSCRVWVVELEGKPVLVIEVPRSCKDLCVRVRV
>Mature_120_residues
TPELVRELIARGEALTLEFKGEERRQLSENDLVETVVCMANRPTQEMGYVLIGVEDDGRVTGARPRDAGGIDPLRIQALI
ANRTRPSLSCRVWVVELEGKPVLVIEVPRSCKDLCVRVRV

Specific function: Unknown

COG id: COG2865

COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13526; Mature: 13395

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPELVRELIARGEALTLEFKGEERRQLSENDLVETVVCMANRPTQEMGYVLIGVEDDGR
CCHHHHHHHHHCCCEEEEEECCCHHHCCCCCHHHHHHHHHCCCCCHHHCEEEEEECCCCC
VTGARPRDAGGIDPLRIQALIANRTRPSLSCRVWVVELEGKPVLVIEVPRSCKDLCVRVR
EECCCCCCCCCCCHHEEEEEECCCCCCCCEEEEEEEEECCCEEEEEECCCCCHHHEEEEC
V
C
>Mature Secondary Structure 
TPELVRELIARGEALTLEFKGEERRQLSENDLVETVVCMANRPTQEMGYVLIGVEDDGR
CHHHHHHHHHCCCEEEEEECCCHHHCCCCCHHHHHHHHHCCCCCHHHCEEEEEECCCCC
VTGARPRDAGGIDPLRIQALIANRTRPSLSCRVWVVELEGKPVLVIEVPRSCKDLCVRVR
EECCCCCCCCCCCHHEEEEEECCCCCCCCEEEEEEEEECCCEEEEEECCCCCHHHEEEEC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA