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The map label for this gene is 55980986

Identifier: 55980986

GI number: 55980986

Start: 964695

End: 966050

Strand: Reverse

Name: 55980986

Synonym: TTHA1017

Alternate gene names: NA

Gene position: 966050-964695 (Counterclockwise)

Preceding gene: 55980987

Following gene: 55980985

Centisome position: 52.23

GC content: 62.02

Gene sequence:

>1356_bases
ATGCCCGTAGGGACGGCCGAGGGCATCTACAAACGGCGGGCTATTGGGGGCACGGGAAGGCCGGAATGCTTGCCCTACCA
CTTCCACGAGATGCAGGGGGCGTTGGCCCATCGCGGAGCCCTGGATTACTCAGCGCTACCGGTTCAGGGGGCTTCCTGGA
GCGATCTGGACCCCTTGGAGTTTGAGCGCTTCCGGCGTTTCATCCGGGAAAGCCGCGGCCAAGGTGACAAAAGCCTTCTG
GACTTGCCTGATGTAGAGCTGGCCAAGGCCCTCGGTGCCGTGGAGGCCAATCACGAGGTAAGGGCGGTTCGTGTGTTGGG
TCTCTTGCTCTTCGGCAAGGAGGAAGCCCTGCAGCGGTTCATCCCGACCCACGAGGTGGCCTTCCAGGTGCTTAGGGGAA
CGCGTGTGGAAGTCAACGATTTCTTCCGCTGGCCACTCTTGCGGACCATGGAGGAGCTTCTAACCCGCTTCCGAGCATGG
AATCATGAAGAGGAGGTATCCTTTGGGCTCATGAGGATTGGTGTGCCGAACTATTCCGAGCGAGCGTTCCGCGAGGGGCT
TGCCAACGCTTTGATTCACCGCGATTACACCCGTTTGGGCGCGGTGCACGTTCAGTGGCATGAGGACCGCATCGAGATCT
CGAACCCCGGCGGCTTCCCGGAGGGGATTCACTTGGGCAACCTGCTCGTCGCTCCGCCGCGGCCACGCAACCCTCTGCTG
GCCGATGCCTTCAAGCGGGCTGGGGTTGTGGAACGGACTGGCCGGGGGATCGACATCATCTTTGAGGAGCAGCTCCGCAA
CGGGCGTCCGGCCCCCTCCTACGAGCAGAGCACACCCGAGAGCGTTGTGCTCGTGCTTCCCGGGGGAGAGGCCAACCTCA
ACTTCGTGCGCCTCATCGTGGAGGAAGGCCAAGCACGCCGTCCCTTAAGACTTGACGAGTTGCTGGTTCTCAACGGCCTT
TGGCAGGAGCGACAGTTAACCACGAAAGAAGCCGCGAGGCTTATCCAGAAGACGGAGGCTACAGCCCGCGCTGTGCTAGA
GCGCCTAGTGGAAACGGGCTTGATCGAGGCGCGAGGCACGGGGCGAGGGCGGACGTATCACCTCTCGGCCTCCACGTATC
GCCGGCTGGGGGAAGAGGCGGCCTACGTGCGCCTGAAGGGCTTTGAACACCAGCAAATGGAGCAGATGGTTCTCGAGTAC
GTGCGGGCCCACGGGAGAATCACACGACGGGAGGCGGCGGAGCTTTGCCGGATAGGACCTTATCAGGCCACTCGACTGCT
TAAACGAATGGTTGAGCAGGGGAAGCTGACGCCCCATGGTGTCGGAAAGGGAACGTGGTATGCGCTTCGCTCGTAA

Upstream 100 bases:

>100_bases
AGGTGAAGGAGGTGCTGGAGAAGATGCTTCAGGAGCGGTATGCCCCCCGTACACAGACTCTTACACAGAGTCCTTGACAC
GACCGGTGCCACCGGCAACA

Downstream 100 bases:

>100_bases
ATACGAGCGCGCATTTATCTTTGCGTGCCCGCACGTAAATGCGTGCACCTGAACGTTGGCCTGATGTGCGAACATGGACG
GGAAGGATTTGGCGCTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Divergent AAA Domain Protein; ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase RecG; AAA-4 Family Protein; ATP-Dependent DNA Helicase RecG-Related Protein; Xin-Antitoxin System Toxin Component Fic Family; Divergent AAA Domain-Containing Protein; Crp Family Transcriptional Regulator; ATP-Dependent DNA Helicase Protein; Transcriptional Regulator With HTH Domain; Transcription Regulator HTH/DeoR Family; Divergent AAA Domain Family

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MPVGTAEGIYKRRAIGGTGRPECLPYHFHEMQGALAHRGALDYSALPVQGASWSDLDPLEFERFRRFIRESRGQGDKSLL
DLPDVELAKALGAVEANHEVRAVRVLGLLLFGKEEALQRFIPTHEVAFQVLRGTRVEVNDFFRWPLLRTMEELLTRFRAW
NHEEEVSFGLMRIGVPNYSERAFREGLANALIHRDYTRLGAVHVQWHEDRIEISNPGGFPEGIHLGNLLVAPPRPRNPLL
ADAFKRAGVVERTGRGIDIIFEEQLRNGRPAPSYEQSTPESVVLVLPGGEANLNFVRLIVEEGQARRPLRLDELLVLNGL
WQERQLTTKEAARLIQKTEATARAVLERLVETGLIEARGTGRGRTYHLSASTYRRLGEEAAYVRLKGFEHQQMEQMVLEY
VRAHGRITRREAAELCRIGPYQATRLLKRMVEQGKLTPHGVGKGTWYALRS

Sequences:

>Translated_451_residues
MPVGTAEGIYKRRAIGGTGRPECLPYHFHEMQGALAHRGALDYSALPVQGASWSDLDPLEFERFRRFIRESRGQGDKSLL
DLPDVELAKALGAVEANHEVRAVRVLGLLLFGKEEALQRFIPTHEVAFQVLRGTRVEVNDFFRWPLLRTMEELLTRFRAW
NHEEEVSFGLMRIGVPNYSERAFREGLANALIHRDYTRLGAVHVQWHEDRIEISNPGGFPEGIHLGNLLVAPPRPRNPLL
ADAFKRAGVVERTGRGIDIIFEEQLRNGRPAPSYEQSTPESVVLVLPGGEANLNFVRLIVEEGQARRPLRLDELLVLNGL
WQERQLTTKEAARLIQKTEATARAVLERLVETGLIEARGTGRGRTYHLSASTYRRLGEEAAYVRLKGFEHQQMEQMVLEY
VRAHGRITRREAAELCRIGPYQATRLLKRMVEQGKLTPHGVGKGTWYALRS
>Mature_450_residues
PVGTAEGIYKRRAIGGTGRPECLPYHFHEMQGALAHRGALDYSALPVQGASWSDLDPLEFERFRRFIRESRGQGDKSLLD
LPDVELAKALGAVEANHEVRAVRVLGLLLFGKEEALQRFIPTHEVAFQVLRGTRVEVNDFFRWPLLRTMEELLTRFRAWN
HEEEVSFGLMRIGVPNYSERAFREGLANALIHRDYTRLGAVHVQWHEDRIEISNPGGFPEGIHLGNLLVAPPRPRNPLLA
DAFKRAGVVERTGRGIDIIFEEQLRNGRPAPSYEQSTPESVVLVLPGGEANLNFVRLIVEEGQARRPLRLDELLVLNGLW
QERQLTTKEAARLIQKTEATARAVLERLVETGLIEARGTGRGRTYHLSASTYRRLGEEAAYVRLKGFEHQQMEQMVLEYV
RAHGRITRREAAELCRIGPYQATRLLKRMVEQGKLTPHGVGKGTWYALRS

Specific function: Unknown

COG id: COG2865

COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51135; Mature: 51004

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVGTAEGIYKRRAIGGTGRPECLPYHFHEMQGALAHRGALDYSALPVQGASWSDLDPLE
CCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
FERFRRFIRESRGQGDKSLLDLPDVELAKALGAVEANHEVRAVRVLGLLLFGKEEALQRF
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH
IPTHEVAFQVLRGTRVEVNDFFRWPLLRTMEELLTRFRAWNHEEEVSFGLMRIGVPNYSE
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCHH
RAFREGLANALIHRDYTRLGAVHVQWHEDRIEISNPGGFPEGIHLGNLLVAPPRPRNPLL
HHHHHHHHHHHHHHHHHHHCEEEEEEECCEEEECCCCCCCCCEEECCEEECCCCCCCCHH
ADAFKRAGVVERTGRGIDIIFEEQLRNGRPAPSYEQSTPESVVLVLPGGEANLNFVRLIV
HHHHHHCCCHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEE
EEGQARRPLRLDELLVLNGLWQERQLTTKEAARLIQKTEATARAVLERLVETGLIEARGT
CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
GRGRTYHLSASTYRRLGEEAAYVRLKGFEHQQMEQMVLEYVRAHGRITRREAAELCRIGP
CCCEEEEECHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
YQATRLLKRMVEQGKLTPHGVGKGTWYALRS
HHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
PVGTAEGIYKRRAIGGTGRPECLPYHFHEMQGALAHRGALDYSALPVQGASWSDLDPLE
CCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
FERFRRFIRESRGQGDKSLLDLPDVELAKALGAVEANHEVRAVRVLGLLLFGKEEALQRF
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH
IPTHEVAFQVLRGTRVEVNDFFRWPLLRTMEELLTRFRAWNHEEEVSFGLMRIGVPNYSE
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCHH
RAFREGLANALIHRDYTRLGAVHVQWHEDRIEISNPGGFPEGIHLGNLLVAPPRPRNPLL
HHHHHHHHHHHHHHHHHHHCEEEEEEECCEEEECCCCCCCCCEEECCEEECCCCCCCCHH
ADAFKRAGVVERTGRGIDIIFEEQLRNGRPAPSYEQSTPESVVLVLPGGEANLNFVRLIV
HHHHHHCCCHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEE
EEGQARRPLRLDELLVLNGLWQERQLTTKEAARLIQKTEATARAVLERLVETGLIEARGT
CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
GRGRTYHLSASTYRRLGEEAAYVRLKGFEHQQMEQMVLEYVRAHGRITRREAAELCRIGP
CCCEEEEECHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
YQATRLLKRMVEQGKLTPHGVGKGTWYALRS
HHHHHHHHHHHHHCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA