| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980949
Identifier: 55980949
GI number: 55980949
Start: 923847
End: 924938
Strand: Reverse
Name: 55980949
Synonym: TTHA0980
Alternate gene names: NA
Gene position: 924938-923847 (Counterclockwise)
Preceding gene: 55980951
Following gene: 55980948
Centisome position: 50.0
GC content: 68.77
Gene sequence:
>1092_bases ATGAAGGTCACCTTGAGCGTGCTCAAGGCGGACATCGGCTCGGTGGGCGGGCACACCCTGCCCAGCCGCAAGGTCCTCGC CAAGGTGGAGGAGGTGGTTCGGGAGGAGGTGGGCCGCCTCCTCCTGGACGCCTACGTCTTCCACATCGGCGACGACATCG TCCTCCTCCTATCCCACACCCGGGGGGTGCGGAACCAGGAGGTGCACGCCCTGGCCTGGAAGGCCTTCCGCGAGGGCACC GAGGTGGCCAAGGCCGAAGGCCTCTACGGGGCGGGCCAGGACCTCCTCAAGGACGCCTTCACGGGGAACCTCCACGGCCT TGGGCCCCAGGTGGCGGAGATGGAGTTCACCGAGCGCCCCGCGGAGCCCTTCATGGTCCTCGCCGCCGACAAGACGGAGC CCGGGGCCTTCAACCTCCCCCTCTACCTGGCCTTCGCCGACCCCATGTACTCCTCGGGCCTCCTCCTTTCCCCGGAGCTT AGGCCCGGCTTCCGCTTCCGCATCATGGACTTGGCCCAGACGGAGCGGGACAGCTACATTGAGCTGGACGCCCCCGAGCG CCTCTACGACATCGCCACCCTCCTTCGCGACTCCCACCGCTTCGCCATAGAGTCCATCTGGTCCCGGAAGCACGGGGAGC AGGCCGCCGTGGTGAGCACCACGCGCCTGAGGAACATCGCCGGGCGCTACGTGGGCAAGGACGACCCCGTGGCCATCGTC CGCACCCAGAAGATCTTCCCCGCCACGGAGGAGTTCGGCCCCGTCTTCGCCCTCGCCCCCTACGTGGCGGGGGACACCCG GGGAAGCCACCACATGCCCCTGATGCCCGTGCGGGCCAACACCCCGGCCTCCACCTTCTTCTGCGTGCCCATGGTGTGCG GCCTGGCCTTCTCCTTGCGGGAGGGGCGGCTTTCCGAGCCCGTGGACCTCTTCGCCGACCCCGTGTGGGAGGCGGTGCGG GCCAAGGTGGTGGAGAAGGCCCAGGAGATGCGCCGCCAGGGCTTCTACGGCCCCGCCATGCTTCCCATGGAGGAGCTGGA GTACACGGGGATCGCCGAGCGGCTGAAGGCTTTGGAGCGGGAGTTCAGTTAA
Upstream 100 bases:
>100_bases GTACCACAGGGGGTAAGCGCTTTGCCCGGTAAAGCGAAAGGGAGCGGCCTTGCGCCGGGGCCCCGGGGTGTGGAAACATG GAAACGAAGGAGGTGAGACT
Downstream 100 bases:
>100_bases AGACCGCTAGGGGCGGCCCCGGGAGGCTCCCGGGGCCCGCTTCTTCACTTTCCCGTGGAGGGGGTTTCAAAAGCCTTGAC GGGGGGCGGGAAAGGGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MKVTLSVLKADIGSVGGHTLPSRKVLAKVEEVVREEVGRLLLDAYVFHIGDDIVLLLSHTRGVRNQEVHALAWKAFREGT EVAKAEGLYGAGQDLLKDAFTGNLHGLGPQVAEMEFTERPAEPFMVLAADKTEPGAFNLPLYLAFADPMYSSGLLLSPEL RPGFRFRIMDLAQTERDSYIELDAPERLYDIATLLRDSHRFAIESIWSRKHGEQAAVVSTTRLRNIAGRYVGKDDPVAIV RTQKIFPATEEFGPVFALAPYVAGDTRGSHHMPLMPVRANTPASTFFCVPMVCGLAFSLREGRLSEPVDLFADPVWEAVR AKVVEKAQEMRRQGFYGPAMLPMEELEYTGIAERLKALEREFS
Sequences:
>Translated_363_residues MKVTLSVLKADIGSVGGHTLPSRKVLAKVEEVVREEVGRLLLDAYVFHIGDDIVLLLSHTRGVRNQEVHALAWKAFREGT EVAKAEGLYGAGQDLLKDAFTGNLHGLGPQVAEMEFTERPAEPFMVLAADKTEPGAFNLPLYLAFADPMYSSGLLLSPEL RPGFRFRIMDLAQTERDSYIELDAPERLYDIATLLRDSHRFAIESIWSRKHGEQAAVVSTTRLRNIAGRYVGKDDPVAIV RTQKIFPATEEFGPVFALAPYVAGDTRGSHHMPLMPVRANTPASTFFCVPMVCGLAFSLREGRLSEPVDLFADPVWEAVR AKVVEKAQEMRRQGFYGPAMLPMEELEYTGIAERLKALEREFS >Mature_363_residues MKVTLSVLKADIGSVGGHTLPSRKVLAKVEEVVREEVGRLLLDAYVFHIGDDIVLLLSHTRGVRNQEVHALAWKAFREGT EVAKAEGLYGAGQDLLKDAFTGNLHGLGPQVAEMEFTERPAEPFMVLAADKTEPGAFNLPLYLAFADPMYSSGLLLSPEL RPGFRFRIMDLAQTERDSYIELDAPERLYDIATLLRDSHRFAIESIWSRKHGEQAAVVSTTRLRNIAGRYVGKDDPVAIV RTQKIFPATEEFGPVFALAPYVAGDTRGSHHMPLMPVRANTPASTFFCVPMVCGLAFSLREGRLSEPVDLFADPVWEAVR AKVVEKAQEMRRQGFYGPAMLPMEELEYTGIAERLKALEREFS
Specific function: Unknown
COG id: COG1980
COG function: function code G; Archaeal fructose 1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002803 - ProDom: PD014260 [H]
Pfam domain/function: PF01950 FBPase_3 [H]
EC number: NA
Molecular weight: Translated: 40362; Mature: 40362
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVTLSVLKADIGSVGGHTLPSRKVLAKVEEVVREEVGRLLLDAYVFHIGDDIVLLLSHT CEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC RGVRNQEVHALAWKAFREGTEVAKAEGLYGAGQDLLKDAFTGNLHGLGPQVAEMEFTERP CCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCC AEPFMVLAADKTEPGAFNLPLYLAFADPMYSSGLLLSPELRPGFRFRIMDLAQTERDSYI CCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEHHHHCCCCCEE ELDAPERLYDIATLLRDSHRFAIESIWSRKHGEQAAVVSTTRLRNIAGRYVGKDDPVAIV ECCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE RTQKIFPATEEFGPVFALAPYVAGDTRGSHHMPLMPVRANTPASTFFCVPMVCGLAFSLR EECCCCCCHHHHCCEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHC EGRLSEPVDLFADPVWEAVRAKVVEKAQEMRRQGFYGPAMLPMEELEYTGIAERLKALER CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHH EFS CCC >Mature Secondary Structure MKVTLSVLKADIGSVGGHTLPSRKVLAKVEEVVREEVGRLLLDAYVFHIGDDIVLLLSHT CEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC RGVRNQEVHALAWKAFREGTEVAKAEGLYGAGQDLLKDAFTGNLHGLGPQVAEMEFTERP CCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCC AEPFMVLAADKTEPGAFNLPLYLAFADPMYSSGLLLSPELRPGFRFRIMDLAQTERDSYI CCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEHHHHCCCCCEE ELDAPERLYDIATLLRDSHRFAIESIWSRKHGEQAAVVSTTRLRNIAGRYVGKDDPVAIV ECCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE RTQKIFPATEEFGPVFALAPYVAGDTRGSHHMPLMPVRANTPASTFFCVPMVCGLAFSLR EECCCCCCHHHHCCEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHC EGRLSEPVDLFADPVWEAVRAKVVEKAQEMRRQGFYGPAMLPMEELEYTGIAERLKALER CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHH EFS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]