| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is paaK [H]
Identifier: 55980935
GI number: 55980935
Start: 910259
End: 911605
Strand: Direct
Name: paaK [H]
Synonym: TTHA0966
Alternate gene names: 55980935
Gene position: 910259-911605 (Clockwise)
Preceding gene: 55980934
Following gene: 55980936
Centisome position: 49.21
GC content: 67.71
Gene sequence:
>1347_bases GTGATGGGGATGATGTACCAGCCGGAACTGGAAACCTTGCCCCGCGAGAAGCTTAGGGCGCTTCAGGAAGAACGGCTCAA GCGCCTGGTGGTCTACGTCTACGAGCGGGTCCCCTTCTACCGGAGGCTCCTTGACGAGGCCGGGGTGGACCCCAAAGGGT TTAGGGGCCTCGAGGACCTCCCCCGGATTCCCTTCACCAAGAAGACGGACCTCCGCGACCACTACCCCTTCGGCCTCTTC GCCGTGCCGAGGGAGGAGGTGGCCAGGATCCACGCCTCTAGCGGCACCACCGGCAAGCCCACCGTGGTGGGCTACACCAA AAACGACCTCAAGGTCTTCGCCGAGGTGGTGGCCCGCTCCTTGGCCGCGGCCGGGGCAAGGCCCGGGATGATGCTCCACA ACGCCTACGGCTACGGCCTCTTCACCGGGGGCCTCGGCCTCCACGGGGGGGCGGAGGCTTTGGGGATGACGGTGGTGCCG GTCTCCGGGGGGATGACGGAAAGGCAGGTCATGCTCATCCAGGACTTCCGCCCCGAGGTGATCTCCTGCACCCCTTCCTA CGCCCAGACCCTGGCGGAGGAGTTCAGAAAGCGGGGGGTCTCCCCGGAGGAGCTCTCCCTGGAGTACGCCGTCCTGGGCG CCGAGCCCTGGACCGAGGCCATCCGCAAGCAGGTGGACGAGGGGCTTGGGGTGAAGAGCACCAACATCTACGGCCTCTCC GAGATCATCGGCCCCGGGGTTTCCAACGAGTGCGTGGAGGAGCGCCAGGGCAGCCACATCTGGGAGGACCACTTCCTGCC CGAGGTGGTGGACCCGGACACCGGGGAGCCCCTCCCCGAGGGGAAGGTGGGGGTTCTGGTCTTCACCACCCTCACCAAGG AGGCCATGCCCCTCCTGCGCTACTGGACCGGGGACCTCACCTTCCTCACCTACGAGGCCTGCACCTGCGGCCGCACCCAC GTGCGCATGGGGCCCATCCTGGGGCGCACTGACGACATGCTCATCATCCGGGGCGTGAACGTCTACCCCACCCAGGTGGA GGCGGTGCTTCTGGCCATCCCCGAGGTGGAGCCCTACTACCAGATCGTGGTGCGGCGGGAGGGCACCCTGGACGAGGCCG AGCTCAAGGTGGAGGTCTCCGAGCCCTTCTTCCGGGAGATCGGCCGGGAGGTCCTCTCCGACGAGGTGGTGGAGGCGGAC CACCGGCTCCACGCCCTAAGGGAGCGGATCGCCCGCAAGATCAAGGACAACGTCGGCGTCACCCTGAAGGTCACCCTCCT CCCCCCGGGCCAGGCCCCGAGGAGCGAGGGGGGGAAGCTCAGGCGGGTCCTGGACCTGAGGAAGTAG
Upstream 100 bases:
>100_bases GAGGTGAACCTCTCCCGGCGCACGGCCACCTACCGGGTGGAGGTGGTCTCCGAAGGCAAGCTCGTGGCCCTCTTCACGGG AACGGTCTTTCGCTTGGGAG
Downstream 100 bases:
>100_bases CCATGCGCCCCATCCCCGAAGGCTACGAGGCGGTCTTTGAGACCGTGGTCACCCCGGAGATGACGGTGCGCTTTGAGGAG CTGGGCCCCGTCCACCCCGT
Product: phenylacetyl-CoA ligase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MMGMMYQPELETLPREKLRALQEERLKRLVVYVYERVPFYRRLLDEAGVDPKGFRGLEDLPRIPFTKKTDLRDHYPFGLF AVPREEVARIHASSGTTGKPTVVGYTKNDLKVFAEVVARSLAAAGARPGMMLHNAYGYGLFTGGLGLHGGAEALGMTVVP VSGGMTERQVMLIQDFRPEVISCTPSYAQTLAEEFRKRGVSPEELSLEYAVLGAEPWTEAIRKQVDEGLGVKSTNIYGLS EIIGPGVSNECVEERQGSHIWEDHFLPEVVDPDTGEPLPEGKVGVLVFTTLTKEAMPLLRYWTGDLTFLTYEACTCGRTH VRMGPILGRTDDMLIIRGVNVYPTQVEAVLLAIPEVEPYYQIVVRREGTLDEAELKVEVSEPFFREIGREVLSDEVVEAD HRLHALRERIARKIKDNVGVTLKVTLLPPGQAPRSEGGKLRRVLDLRK
Sequences:
>Translated_448_residues MMGMMYQPELETLPREKLRALQEERLKRLVVYVYERVPFYRRLLDEAGVDPKGFRGLEDLPRIPFTKKTDLRDHYPFGLF AVPREEVARIHASSGTTGKPTVVGYTKNDLKVFAEVVARSLAAAGARPGMMLHNAYGYGLFTGGLGLHGGAEALGMTVVP VSGGMTERQVMLIQDFRPEVISCTPSYAQTLAEEFRKRGVSPEELSLEYAVLGAEPWTEAIRKQVDEGLGVKSTNIYGLS EIIGPGVSNECVEERQGSHIWEDHFLPEVVDPDTGEPLPEGKVGVLVFTTLTKEAMPLLRYWTGDLTFLTYEACTCGRTH VRMGPILGRTDDMLIIRGVNVYPTQVEAVLLAIPEVEPYYQIVVRREGTLDEAELKVEVSEPFFREIGREVLSDEVVEAD HRLHALRERIARKIKDNVGVTLKVTLLPPGQAPRSEGGKLRRVLDLRK >Mature_448_residues MMGMMYQPELETLPREKLRALQEERLKRLVVYVYERVPFYRRLLDEAGVDPKGFRGLEDLPRIPFTKKTDLRDHYPFGLF AVPREEVARIHASSGTTGKPTVVGYTKNDLKVFAEVVARSLAAAGARPGMMLHNAYGYGLFTGGLGLHGGAEALGMTVVP VSGGMTERQVMLIQDFRPEVISCTPSYAQTLAEEFRKRGVSPEELSLEYAVLGAEPWTEAIRKQVDEGLGVKSTNIYGLS EIIGPGVSNECVEERQGSHIWEDHFLPEVVDPDTGEPLPEGKVGVLVFTTLTKEAMPLLRYWTGDLTFLTYEACTCGRTH VRMGPILGRTDDMLIIRGVNVYPTQVEAVLLAIPEVEPYYQIVVRREGTLDEAELKVEVSEPFFREIGREVLSDEVVEAD HRLHALRERIARKIKDNVGVTLKVTLLPPGQAPRSEGGKLRRVLDLRK
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=440, Percent_Identity=52.5, Blast_Score=430, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 50045; Mature: 50045
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGMMYQPELETLPREKLRALQEERLKRLVVYVYERVPFYRRLLDEAGVDPKGFRGLEDL CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHC PRIPFTKKTDLRDHYPFGLFAVPREEVARIHASSGTTGKPTVVGYTKNDLKVFAEVVARS CCCCCCCCCCCCCCCCCCEEECCHHHHHHEECCCCCCCCCEEEEECCHHHHHHHHHHHHH LAAAGARPGMMLHNAYGYGLFTGGLGLHGGAEALGMTVVPVSGGMTERQVMLIQDFRPEV HHHCCCCCCEEEECCCCCEEEECCCCCCCCCHHHCEEEEECCCCCCCCEEEEEECCCCCE ISCTPSYAQTLAEEFRKRGVSPEELSLEYAVLGAEPWTEAIRKQVDEGLGVKSTNIYGLS EECCHHHHHHHHHHHHHCCCCHHHCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHH EIIGPGVSNECVEERQGSHIWEDHFLPEVVDPDTGEPLPEGKVGVLVFTTLTKEAMPLLR HHHCCCCCHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHH YWTGDLTFLTYEACTCGRTHVRMGPILGRTDDMLIIRGVNVYPTQVEAVLLAIPEVEPYY HHCCCEEEEEEECCCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHEEEEEECCCCCCEE QIVVRREGTLDEAELKVEVSEPFFREIGREVLSDEVVEADHRLHALRERIARKIKDNVGV EEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE TLKVTLLPPGQAPRSEGGKLRRVLDLRK EEEEEEECCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MMGMMYQPELETLPREKLRALQEERLKRLVVYVYERVPFYRRLLDEAGVDPKGFRGLEDL CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCHHHC PRIPFTKKTDLRDHYPFGLFAVPREEVARIHASSGTTGKPTVVGYTKNDLKVFAEVVARS CCCCCCCCCCCCCCCCCCEEECCHHHHHHEECCCCCCCCCEEEEECCHHHHHHHHHHHHH LAAAGARPGMMLHNAYGYGLFTGGLGLHGGAEALGMTVVPVSGGMTERQVMLIQDFRPEV HHHCCCCCCEEEECCCCCEEEECCCCCCCCCHHHCEEEEECCCCCCCCEEEEEECCCCCE ISCTPSYAQTLAEEFRKRGVSPEELSLEYAVLGAEPWTEAIRKQVDEGLGVKSTNIYGLS EECCHHHHHHHHHHHHHCCCCHHHCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHH EIIGPGVSNECVEERQGSHIWEDHFLPEVVDPDTGEPLPEGKVGVLVFTTLTKEAMPLLR HHHCCCCCHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHH YWTGDLTFLTYEACTCGRTHVRMGPILGRTDDMLIIRGVNVYPTQVEAVLLAIPEVEPYY HHCCCEEEEEEECCCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHEEEEEECCCCCCEE QIVVRREGTLDEAELKVEVSEPFFREIGREVLSDEVVEADHRLHALRERIARKIKDNVGV EEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE TLKVTLLPPGQAPRSEGGKLRRVLDLRK EEEEEEECCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]