| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is hslO [H]
Identifier: 55980863
GI number: 55980863
Start: 855742
End: 856767
Strand: Direct
Name: hslO [H]
Synonym: TTHA0894
Alternate gene names: 55980863
Gene position: 855742-856767 (Clockwise)
Preceding gene: 55980861
Following gene: 55980864
Centisome position: 46.26
GC content: 70.96
Gene sequence:
>1026_bases ATGGGACGGATCCTTAGGGGCCTGGCCGGGGAGGGGGATCTGAGGGTGGTGGCCGCCGAGACCACGGACGTGGTGGAGGA GGCGCGGCTGCGCCACGGCCTTTCCCCCACGGCCACGGCCGCCCTTGGCCGCGCCATGACCGGGGCCCTCCTTTTGGCCC AGCTCCTCCTCAAGACCCCCAAGGAGCGGATCACCCTCCGCGTGGAGGGGACGGGGCCCTTGGGGGGGCTTGTGGTAGAG GCGGACGCCTTTGGGCACGTGCGGGGCTACGTGAAGAACCCCAGGGCCGAGGTCCCCTTGAGGGAGGACGGGAAGCTCAA CGTGGGGGAGCTTGTGGGAGCCGGGGCGCTTCGGGTGGACCGGAGCCTGCCGAGCGGGGAGGTCTATACGAGCACCGTCC CCCTGGTCTCGGGGGAGATCGCCGAGGACCTCGCCCACTACCTCTGGCAGTCGGAGCAGATCCCTTCCGCCGTCCTCCTC GGCGTGCGGGTCAAGGGAGAAGGGGAGGTGGAGGTGGCGGGGGGCGTGGCCGTCCAGGTGATGCCCGGGGCCAGGGAAGA GGTTTTGGACCGCCTCGAGGCCAACCTGAAGGACCTCCCCGGCCTCACCCCCCTCCTTCGGGAGCGGGGCCTGGAGGGGG CTTTGGAGGCCCTTCTTGCGGGCCTGGGCTTTGAGCGCACCGACCTCCGCGCCCTGGGCTACTTCCAGAACGAGATCCCC GCCCGCTTCCGCTGCCGCTGCAACCGGGAGAAGGCCCTGGAGGCCCTGGTCTTCTTCACTCCGGAGGAGCGGGAGGACAT GATCGTGAAGGACGGCGGGGCGGAGGTGGTCTGCCACTGGTGCGGGGAGGTCTACCGCTTCTCCCCGGAGGAGGTCCGCT CCCTGGTGGCCGAGGTGCGCTGCCCCGACTGCGGGACGCTTTGGCTCTACCCCAAGGGGGACGGCACCCTCGCCCGCATT GAGGGGGAGACCTGCCGCTGCGGCCGCAAGGTGGAGCTTCCCTCGGAGACCCGCCCCCAGGCTTGA
Upstream 100 bases:
>100_bases CGGGGACCGCGGGCTCAAAGGGCACTTTGCGGCGCGCCAGGGTGTCGTAGATGACCAGGCCCATAGGGCGATTATAGGGC CCGTGGCATAATGGCGGGGT
Downstream 100 bases:
>100_bases CCACCCCATGCTGGCTTAGACCAGCATGGGGGCCCCAGAGGAGGGTCCGGGGGCCGAGGAAGCGGGTAAACTAGGAGCAT GTTCAAGACCATCCTCCTGG
Product: chaperonin HSP33
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MGRILRGLAGEGDLRVVAAETTDVVEEARLRHGLSPTATAALGRAMTGALLLAQLLLKTPKERITLRVEGTGPLGGLVVE ADAFGHVRGYVKNPRAEVPLREDGKLNVGELVGAGALRVDRSLPSGEVYTSTVPLVSGEIAEDLAHYLWQSEQIPSAVLL GVRVKGEGEVEVAGGVAVQVMPGAREEVLDRLEANLKDLPGLTPLLRERGLEGALEALLAGLGFERTDLRALGYFQNEIP ARFRCRCNREKALEALVFFTPEEREDMIVKDGGAEVVCHWCGEVYRFSPEEVRSLVAEVRCPDCGTLWLYPKGDGTLARI EGETCRCGRKVELPSETRPQA
Sequences:
>Translated_341_residues MGRILRGLAGEGDLRVVAAETTDVVEEARLRHGLSPTATAALGRAMTGALLLAQLLLKTPKERITLRVEGTGPLGGLVVE ADAFGHVRGYVKNPRAEVPLREDGKLNVGELVGAGALRVDRSLPSGEVYTSTVPLVSGEIAEDLAHYLWQSEQIPSAVLL GVRVKGEGEVEVAGGVAVQVMPGAREEVLDRLEANLKDLPGLTPLLRERGLEGALEALLAGLGFERTDLRALGYFQNEIP ARFRCRCNREKALEALVFFTPEEREDMIVKDGGAEVVCHWCGEVYRFSPEEVRSLVAEVRCPDCGTLWLYPKGDGTLARI EGETCRCGRKVELPSETRPQA >Mature_340_residues GRILRGLAGEGDLRVVAAETTDVVEEARLRHGLSPTATAALGRAMTGALLLAQLLLKTPKERITLRVEGTGPLGGLVVEA DAFGHVRGYVKNPRAEVPLREDGKLNVGELVGAGALRVDRSLPSGEVYTSTVPLVSGEIAEDLAHYLWQSEQIPSAVLLG VRVKGEGEVEVAGGVAVQVMPGAREEVLDRLEANLKDLPGLTPLLRERGLEGALEALLAGLGFERTDLRALGYFQNEIPA RFRCRCNREKALEALVFFTPEEREDMIVKDGGAEVVCHWCGEVYRFSPEEVRSLVAEVRCPDCGTLWLYPKGDGTLARIE GETCRCGRKVELPSETRPQA
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=246, Percent_Identity=26.0162601626016, Blast_Score=75, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 36912; Mature: 36781
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRILRGLAGEGDLRVVAAETTDVVEEARLRHGLSPTATAALGRAMTGALLLAQLLLKTP CCCHHHHCCCCCCEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC KERITLRVEGTGPLGGLVVEADAFGHVRGYVKNPRAEVPLREDGKLNVGELVGAGALRVD CHHEEEEEECCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCEEEC RSLPSGEVYTSTVPLVSGEIAEDLAHYLWQSEQIPSAVLLGVRVKGEGEVEVAGGVAVQV CCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCEEEEE MPGAREEVLDRLEANLKDLPGLTPLLRERGLEGALEALLAGLGFERTDLRALGYFQNEIP CCCCHHHHHHHHHCCHHHCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC ARFRCRCNREKALEALVFFTPEEREDMIVKDGGAEVVCHWCGEVYRFSPEEVRSLVAEVR CHHHEECCHHHHHEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHC CPDCGTLWLYPKGDGTLARIEGETCRCGRKVELPSETRPQA CCCCCEEEEEECCCCCEEEECCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GRILRGLAGEGDLRVVAAETTDVVEEARLRHGLSPTATAALGRAMTGALLLAQLLLKTP CCHHHHCCCCCCEEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC KERITLRVEGTGPLGGLVVEADAFGHVRGYVKNPRAEVPLREDGKLNVGELVGAGALRVD CHHEEEEEECCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCEEEC RSLPSGEVYTSTVPLVSGEIAEDLAHYLWQSEQIPSAVLLGVRVKGEGEVEVAGGVAVQV CCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCEEEEE MPGAREEVLDRLEANLKDLPGLTPLLRERGLEGALEALLAGLGFERTDLRALGYFQNEIP CCCCHHHHHHHHHCCHHHCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC ARFRCRCNREKALEALVFFTPEEREDMIVKDGGAEVVCHWCGEVYRFSPEEVRSLVAEVR CHHHEECCHHHHHEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHC CPDCGTLWLYPKGDGTLARIEGETCRCGRKVELPSETRPQA CCCCCEEEEEECCCCCEEEECCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA