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The map label for this gene is yibD [C]

Identifier: 55980850

GI number: 55980850

Start: 839124

End: 839807

Strand: Direct

Name: yibD [C]

Synonym: TTHA0881

Alternate gene names: 55980850

Gene position: 839124-839807 (Clockwise)

Preceding gene: 55980847

Following gene: 55980858

Centisome position: 45.36

GC content: 70.61

Gene sequence:

>684_bases
GTGCGCGTCAGCGTGGTGATTCCCGCCCGGAACGAGGAGGCCTACCTGCCCTCCGCCCTGGAGGCGGTCTTGGCCCAGAC
CCTTCCGCCCTTTGAGGTCATCGTGGTGGACAACGCCTCCACCGACCGCACCCGGGAGGTGGCCGAGGCCTTTGGGGCGC
GGGTGGTCTTCTGCGGCAGGAAAGGGGTGGCCTACGCCCGCCAGGCGGGGCTTTTGGCGGCGCGGGGGGAGTGGGTGGCC
ATGACCGACGCCGACTCCCTGCCCACGCCCCGCTGGCTGGAGAGGCTCGCCCATAAGGCCCCGGGGGCGGTGGCCGTCTA
CGGCCCCTTGCGCTTCTATGGGGTCTCCCCCTTGGAGGCCGCCTTCTCCGAGTGGGGCTACCGGGCCTTCCTCAACCTCA
TGGCCCTCCTGGGGCGGCCCAACCTCGCCGGGGCCAACATGATGGTCCTGAAGGAGGCGGCCCTGAAGGTGGGGGGCTTC
CCCGAGGTGGAGGCGAGGGAAGACGTCCTCTTGGGCTGGAGGCTCAAGGCCCTGGGCCCCGTGCGCTACGCGAGGGACGC
CCTCGTCCTCACCTCCGCCCGCAGGCTCCAGGGAGGGTGGGGGCGGTTCCTCCTGAGGCAGGCTAGAAACCTCCTGGGCG
ATCCTCGAGGCTACTTCGGGGAAGCCGGGGAAAGGGAAAGATGA

Upstream 100 bases:

>100_bases
CGCACCCCCTCCAGGAGGCCCACCACGAGGACGAGGCGGAGAAGGGCGGAAAGCCCTTCCCGCCGCCACGGGAGGAAGCG
AAACACGCTAGAGTATACCC

Downstream 100 bases:

>100_bases
GCCTTCTCGGCTCCACCCGCAGGATCTCGCTCGCCTCGTCGTAGACGGCCACGATCTGCTCGGCGATGGTTTCCGCTGAG
CGCTTTAGGGCGAAGGCCCG

Product: glycosyltransferase

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; UDP-Hexose Transferase; Cell Wall Biogenesis Glycosyltransferase; Dolichyl-Phosphate Mannose Synthase Related Protein; Group 2 Family Glycosyl Transferase; Glycosyl Transferase-Related Protein; Glucosyltransferase; Membrane Sugar Transferase; Glycosyl Transferase Gt2L; Glycosyl Transferase GT2 Family; Sugar Transferase Related Protein; Glycosyltransferase Protein; Sugar Transferase; UDP-Glucose 4-Epimerase; Glycosyl Transferase Family Polysaccharide Deacetylase; Hyaluronan Synthase ; Tyrosine Protein Kinase; B-Glycosyltransferase; Teichoic Acid Biosynthesis Related Protein; Methyltransferase FkbM Family; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyltransferase-Like Protein; Bi-Functional Transferase/Deacetylase; Glycosyl Transferase Group 2 Family; Sugar Transferase- A Glycosyl Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Dolichyl-Phosphate Mannose Synthase-Like Protein; Minor Teichoic Acid Biosynthesis Protein GgaA; Glycosyl Transferase Domain-Containing Protein; Cell Wall Biosynthesis Glycosyltransferase

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MRVSVVIPARNEEAYLPSALEAVLAQTLPPFEVIVVDNASTDRTREVAEAFGARVVFCGRKGVAYARQAGLLAARGEWVA
MTDADSLPTPRWLERLAHKAPGAVAVYGPLRFYGVSPLEAAFSEWGYRAFLNLMALLGRPNLAGANMMVLKEAALKVGGF
PEVEAREDVLLGWRLKALGPVRYARDALVLTSARRLQGGWGRFLLRQARNLLGDPRGYFGEAGERER

Sequences:

>Translated_227_residues
MRVSVVIPARNEEAYLPSALEAVLAQTLPPFEVIVVDNASTDRTREVAEAFGARVVFCGRKGVAYARQAGLLAARGEWVA
MTDADSLPTPRWLERLAHKAPGAVAVYGPLRFYGVSPLEAAFSEWGYRAFLNLMALLGRPNLAGANMMVLKEAALKVGGF
PEVEAREDVLLGWRLKALGPVRYARDALVLTSARRLQGGWGRFLLRQARNLLGDPRGYFGEAGERER
>Mature_227_residues
MRVSVVIPARNEEAYLPSALEAVLAQTLPPFEVIVVDNASTDRTREVAEAFGARVVFCGRKGVAYARQAGLLAARGEWVA
MTDADSLPTPRWLERLAHKAPGAVAVYGPLRFYGVSPLEAAFSEWGYRAFLNLMALLGRPNLAGANMMVLKEAALKVGGF
PEVEAREDVLLGWRLKALGPVRYARDALVLTSARRLQGGWGRFLLRQARNLLGDPRGYFGEAGERER

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 24867; Mature: 24867

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSVVIPARNEEAYLPSALEAVLAQTLPPFEVIVVDNASTDRTREVAEAFGARVVFCGR
CEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECC
KGVAYARQAGLLAARGEWVAMTDADSLPTPRWLERLAHKAPGAVAVYGPLRFYGVSPLEA
CCCHHHHHCCCEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHCCCCHHHH
AFSEWGYRAFLNLMALLGRPNLAGANMMVLKEAALKVGGFPEVEAREDVLLGWRLKALGP
HHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHCCC
VRYARDALVLTSARRLQGGWGRFLLRQARNLLGDPRGYFGEAGERER
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVSVVIPARNEEAYLPSALEAVLAQTLPPFEVIVVDNASTDRTREVAEAFGARVVFCGR
CEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECC
KGVAYARQAGLLAARGEWVAMTDADSLPTPRWLERLAHKAPGAVAVYGPLRFYGVSPLEA
CCCHHHHHCCCEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHCCCCHHHH
AFSEWGYRAFLNLMALLGRPNLAGANMMVLKEAALKVGGFPEVEAREDVLLGWRLKALGP
HHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHCCC
VRYARDALVLTSARRLQGGWGRFLLRQARNLLGDPRGYFGEAGERER
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA