| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980822
Identifier: 55980822
GI number: 55980822
Start: 815771
End: 816352
Strand: Direct
Name: 55980822
Synonym: TTHA0853
Alternate gene names: NA
Gene position: 815771-816352 (Clockwise)
Preceding gene: 55980821
Following gene: 55980834
Centisome position: 44.1
GC content: 71.13
Gene sequence:
>582_bases GTGGGGATTTTGGGCGGCAGGAGGGCGAACAAAGCGGGAAAGAAGGGTATGGGGGTGGTGGCGCGGCTTCTCGGCCTTGG CCTCCTCCTCGGCCTGGCCTGGGCCCAGATCCTCCCCTCTGAGGGGGGGCTTTACGTCTACAGCGACGGCACGGTCCAGG CGCTCGAGGCGGTGGAAGGAGGGTACCGCCTCGCCTACCGGCGGGACGGGAAGGTCTTCCGCGAGGACCGGCTCCGCTTC GGCGCAGAGGGGATCTACTTGGAAGGGGTCGCGCTCCCCGAGGGGTTCTTCCCCTTCGCCCCGCCCTTGCTCCTCTACCC GAAGAGGCTTGTCCCGGGCGCTTTTTGGTCGGGGAACGCCCGCTTCCAGGAGCAGCGGGTGGCCCTGGCGGTCCGGGTGG AGGGGGTGGAGGGGGTTAGGGTGCCCGCGGGGCGCTTCAACGCCTACCGCCTGCGGGTGGCCTTCACCACGGAGCGGGGC GGGGCCGACGTGAAGCTCCTCTACCTCGTCCCCGGCCTCGGCGTGGTGGCCTTCCAGGCGGGGGAGGGCCTCGTGGGCCT CGTCCGCTTCAGCGCGCCCTGA
Upstream 100 bases:
>100_bases GTGGAGGCGGCCACCCAGAGGGGGCACGAGCTCGGCGAGTCGGAGTGAGGCCACCCCATGCGGGCTTGCGCCCGCATGGG GGCCCCGGCAGAAGGCTTGG
Downstream 100 bases:
>100_bases GCCGGTAGCGCAGGATCTCCCAGTACATGCGGAGCCGGTGGCCGAGCCCGGCGAGAACCCCCCGCTTCTCCTCCTTCATC ACCTGGCTCACCCCCTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MGILGGRRANKAGKKGMGVVARLLGLGLLLGLAWAQILPSEGGLYVYSDGTVQALEAVEGGYRLAYRRDGKVFREDRLRF GAEGIYLEGVALPEGFFPFAPPLLLYPKRLVPGAFWSGNARFQEQRVALAVRVEGVEGVRVPAGRFNAYRLRVAFTTERG GADVKLLYLVPGLGVVAFQAGEGLVGLVRFSAP
Sequences:
>Translated_193_residues MGILGGRRANKAGKKGMGVVARLLGLGLLLGLAWAQILPSEGGLYVYSDGTVQALEAVEGGYRLAYRRDGKVFREDRLRF GAEGIYLEGVALPEGFFPFAPPLLLYPKRLVPGAFWSGNARFQEQRVALAVRVEGVEGVRVPAGRFNAYRLRVAFTTERG GADVKLLYLVPGLGVVAFQAGEGLVGLVRFSAP >Mature_192_residues GILGGRRANKAGKKGMGVVARLLGLGLLLGLAWAQILPSEGGLYVYSDGTVQALEAVEGGYRLAYRRDGKVFREDRLRFG AEGIYLEGVALPEGFFPFAPPLLLYPKRLVPGAFWSGNARFQEQRVALAVRVEGVEGVRVPAGRFNAYRLRVAFTTERGG ADVKLLYLVPGLGVVAFQAGEGLVGLVRFSAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20739; Mature: 20607
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGILGGRRANKAGKKGMGVVARLLGLGLLLGLAWAQILPSEGGLYVYSDGTVQALEAVEG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCC GYRLAYRRDGKVFREDRLRFGAEGIYLEGVALPEGFFPFAPPLLLYPKRLVPGAFWSGNA CEEEEEECCCCEEHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHCCCHHHCCCCEECCCC RFQEQRVALAVRVEGVEGVRVPAGRFNAYRLRVAFTTERGGADVKLLYLVPGLGVVAFQA CCCCCEEEEEEEEECCCCEECCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCEEEEEC GEGLVGLVRFSAP CCCEEEEEEECCC >Mature Secondary Structure GILGGRRANKAGKKGMGVVARLLGLGLLLGLAWAQILPSEGGLYVYSDGTVQALEAVEG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCC GYRLAYRRDGKVFREDRLRFGAEGIYLEGVALPEGFFPFAPPLLLYPKRLVPGAFWSGNA CEEEEEECCCCEEHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHCCCHHHCCCCEECCCC RFQEQRVALAVRVEGVEGVRVPAGRFNAYRLRVAFTTERGGADVKLLYLVPGLGVVAFQA CCCCCEEEEEEEEECCCCEECCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCEEEEEC GEGLVGLVRFSAP CCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA