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The map label for this gene is yiaO [C]

Identifier: 55980735

GI number: 55980735

Start: 732580

End: 733665

Strand: Direct

Name: yiaO [C]

Synonym: TTHA0766

Alternate gene names: 55980735

Gene position: 732580-733665 (Clockwise)

Preceding gene: 55980734

Following gene: 55980736

Centisome position: 39.6

GC content: 61.23

Gene sequence:

>1086_bases
ATGAAAAGGGTTTCGCGGCGCGCCTTTCTGAGGAGGTTGGGTGTAGGGGTGGCGGCCACTGCGGCCTTTTCTCCTCTGGC
GGTGGCCCAAGCGAGGCGCTACCGTTGGCGCATCCAGACCGCTTGGGATGCGGGCACGGTAGGCTATTCCCTGTTCCAGA
AGTTCACCGAGCGTGTTAAGGAGCTCACCGACGGCCAGTTGGAGGTTCAGCCCTTCCCCGCAGGGGCCGTGGTGGGTACC
TTTGACATGTTTGACGCGGTGAAGACGGGCGTTTTGGACGGGATGAACCCCTTCACCCTCTACTGGGCGGGGCGGATGCC
GGTGACGGCCTTTCTTTCCTCCTATGCCCTGGGTTTGGACCGGCCCGACCAGTGGGAGACCTGGTTCTACAGCCTGGGCG
GCCTGGACATCGCCCGGAGGGCCTTCGCCGAGCAGGGGCTTTTCTACGTGGGCCCCGTGCAACACGATTTGAACATCATC
CACTCCAAAAAGCCGATCCGTCGCTTTGAGGATTTCAAAGGGGTAAAGCTGCGGGTGCCGGGCGGAATGATTGCTGAAGT
CTTTGCCGCCGCGGGGGCCTCCACGGTCCTTCTACCCGGAGGCGAGGTCTATCCTGCCTTGGAGCGTGGGGTCATTGATG
CGGCCGACTTTGTGGGGCCTGCGGTCAACTACAATCTGGGCTTCCACCAGGTGGCCAAGTACATCATTATGGGGCCCCCG
GAGACCCCGGCCATCCATCAGCCGGTGGACCTTATGGACTTCACCATCAACCTCAATCGGTGGCGGTCGCTACCCAAGCC
TTTGCAAGAGCGTTTCATCGCCGCTGTTCACGAATACAGTTGGATTCACTACGCCGGGATTCAAAAGGCCAACCTCGAGG
CCTGGCCCAAGTACCGCCAGGCGGGTGTGGAGGTCATCCGCCTGTCTAACGAGGACGTGCGCAAGTTCCGCCGTCTGGCC
ATCCCCATCTGGTTCAAGTGGGCCAAGATGGACAAGTACTCGCGGGAGGCCTTCGCCAGCCAGCTGGAGTACATGAAGGG
CATCGGCTACGTTACGGACGAGGAGCTCAAGGGGCTTTCCCTTTAG

Upstream 100 bases:

>100_bases
GGTCCGTCTGAATTTTAAGCAATGAAAAACCCCTTCATGCCTTGACAACCTGGGGGAGGCCGTGGTGTGATGAGGGGGCC
CAAAAGAAAGGGGGAGCCAC

Downstream 100 bases:

>100_bases
GCCTATGAACGCCCTGCTGCGCTGGCTCTCCTGGGTGGAGGCGGTGGCGGTCTGGGTGGGGCGTCTGGCCGCTTGGATCA
CCTTGGTCTGCGTGCTCATC

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; Trap Dicarboxylate Transporter- Dctp Subunit; TRAP Dicarboxylate Transporter Subunit DctP; TRAP Dicarboxylate Family Transporter DctP Subunit; TRAP Dicarboxylate Transporter DctP Subunit; Transporter Periplasmic Component; Trap Dicarboxylate Family Transporter Dctp Subunit; TRAP Transporter DctP Family Protein; TRAP Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; Trap-T Transport System Periplasmic Component; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Trap Dicarboxylate Transporter Dctp Subunit; TRAP Dicarboxylate Transporter- Dctp Subunit; Trap Transporter Dctp Subunit Containing Protein

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKRVSRRAFLRRLGVGVAATAAFSPLAVAQARRYRWRIQTAWDAGTVGYSLFQKFTERVKELTDGQLEVQPFPAGAVVGT
FDMFDAVKTGVLDGMNPFTLYWAGRMPVTAFLSSYALGLDRPDQWETWFYSLGGLDIARRAFAEQGLFYVGPVQHDLNII
HSKKPIRRFEDFKGVKLRVPGGMIAEVFAAAGASTVLLPGGEVYPALERGVIDAADFVGPAVNYNLGFHQVAKYIIMGPP
ETPAIHQPVDLMDFTINLNRWRSLPKPLQERFIAAVHEYSWIHYAGIQKANLEAWPKYRQAGVEVIRLSNEDVRKFRRLA
IPIWFKWAKMDKYSREAFASQLEYMKGIGYVTDEELKGLSL

Sequences:

>Translated_361_residues
MKRVSRRAFLRRLGVGVAATAAFSPLAVAQARRYRWRIQTAWDAGTVGYSLFQKFTERVKELTDGQLEVQPFPAGAVVGT
FDMFDAVKTGVLDGMNPFTLYWAGRMPVTAFLSSYALGLDRPDQWETWFYSLGGLDIARRAFAEQGLFYVGPVQHDLNII
HSKKPIRRFEDFKGVKLRVPGGMIAEVFAAAGASTVLLPGGEVYPALERGVIDAADFVGPAVNYNLGFHQVAKYIIMGPP
ETPAIHQPVDLMDFTINLNRWRSLPKPLQERFIAAVHEYSWIHYAGIQKANLEAWPKYRQAGVEVIRLSNEDVRKFRRLA
IPIWFKWAKMDKYSREAFASQLEYMKGIGYVTDEELKGLSL
>Mature_361_residues
MKRVSRRAFLRRLGVGVAATAAFSPLAVAQARRYRWRIQTAWDAGTVGYSLFQKFTERVKELTDGQLEVQPFPAGAVVGT
FDMFDAVKTGVLDGMNPFTLYWAGRMPVTAFLSSYALGLDRPDQWETWFYSLGGLDIARRAFAEQGLFYVGPVQHDLNII
HSKKPIRRFEDFKGVKLRVPGGMIAEVFAAAGASTVLLPGGEVYPALERGVIDAADFVGPAVNYNLGFHQVAKYIIMGPP
ETPAIHQPVDLMDFTINLNRWRSLPKPLQERFIAAVHEYSWIHYAGIQKANLEAWPKYRQAGVEVIRLSNEDVRKFRRLA
IPIWFKWAKMDKYSREAFASQLEYMKGIGYVTDEELKGLSL

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=293, Percent_Identity=23.8907849829352, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40761; Mature: 40761

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVSRRAFLRRLGVGVAATAAFSPLAVAQARRYRWRIQTAWDAGTVGYSLFQKFTERVK
CCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHH
ELTDGQLEVQPFPAGAVVGTFDMFDAVKTGVLDGMNPFTLYWAGRMPVTAFLSSYALGLD
HHCCCCEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCC
RPDQWETWFYSLGGLDIARRAFAEQGLFYVGPVQHDLNIIHSKKPIRRFEDFKGVKLRVP
CCCCHHHHHHHCCCHHHHHHHHHHCCCEEECCCHHHHHHHCCCCHHHHHHCCCCEEEECC
GGMIAEVFAAAGASTVLLPGGEVYPALERGVIDAADFVGPAVNYNLGFHQVAKYIIMGPP
CCHHHHHHHHCCCCEEEECCCCCCHHHHCCCHHHHHHCCCCCCCCCCHHHHHHEEEECCC
ETPAIHQPVDLMDFTINLNRWRSLPKPLQERFIAAVHEYSWIHYAGIQKANLEAWPKYRQ
CCCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHH
AGVEVIRLSNEDVRKFRRLAIPIWFKWAKMDKYSREAFASQLEYMKGIGYVTDEELKGLS
CCCEEEEECCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
L
C
>Mature Secondary Structure
MKRVSRRAFLRRLGVGVAATAAFSPLAVAQARRYRWRIQTAWDAGTVGYSLFQKFTERVK
CCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHH
ELTDGQLEVQPFPAGAVVGTFDMFDAVKTGVLDGMNPFTLYWAGRMPVTAFLSSYALGLD
HHCCCCEEEEECCCCCEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCC
RPDQWETWFYSLGGLDIARRAFAEQGLFYVGPVQHDLNIIHSKKPIRRFEDFKGVKLRVP
CCCCHHHHHHHCCCHHHHHHHHHHCCCEEECCCHHHHHHHCCCCHHHHHHCCCCEEEECC
GGMIAEVFAAAGASTVLLPGGEVYPALERGVIDAADFVGPAVNYNLGFHQVAKYIIMGPP
CCHHHHHHHHCCCCEEEECCCCCCHHHHCCCHHHHHHCCCCCCCCCCHHHHHHEEEECCC
ETPAIHQPVDLMDFTINLNRWRSLPKPLQERFIAAVHEYSWIHYAGIQKANLEAWPKYRQ
CCCCCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHH
AGVEVIRLSNEDVRKFRRLAIPIWFKWAKMDKYSREAFASQLEYMKGIGYVTDEELKGLS
CCCEEEEECCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA