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The map label for this gene is rfaB [C]

Identifier: 55980617

GI number: 55980617

Start: 616031

End: 617146

Strand: Reverse

Name: rfaB [C]

Synonym: TTHA0648

Alternate gene names: 55980617

Gene position: 617146-616031 (Counterclockwise)

Preceding gene: 55980618

Following gene: 55980616

Centisome position: 33.36

GC content: 60.66

Gene sequence:

>1116_bases
ATGCGTCCGGACGTAGCCTTTGCTCTCCCGGCGCTGGCTGGGGGAGGGGTGGAGCGGGTGTACCTGGACCTGGCTGGGGC
CATGGTGAAGGAGGGACTTAGGGTGGACTTCGTCTTGGCCAGGGCCGAAGGGCCCCTTTTAGCGCAACTCCCTCAGGGGG
TCCGCCTTTGGGACCTAGGGGTGCCTCGGCGGCTACGCCTGCTTAGGGCGTACACCCCCCTAGGGGTCTACTTGGCCCAA
GCCAGGCCTAGGGTAGTCCTCCCTGTTTGGGACTACCTGGACTGGGTTCCTCTCCAGGCCGCCTGGCGGTCAAGGACGCC
TTTTCTCTGGGTTTTGCACAACGCCCCTGCCTACCTCAAGGACGTTCCCAACCCAGTCAAAAGGCATACCGCCCTGTGGG
CTGCTAGACAAACCCTAAAGCGGGCGGTGAACCACCCCCTGGGTCGGGTAGGAGCGGTCTCCAGGGGTGTGGCCCAAGCC
TTCGCCCGCTTCGGTGGAGTTCCCGAGGAGAGGATATGCGTCTTACCCAATCCGATCCACGTAGACCGCGTGCGACGGCT
CTCTCATGAAAACGTGCCTCTACCTGCAACGCCTTACTTCTTGGCGCTAGGCCGCCTGCATCCTCAAAAAGGCTTTTCAC
TTCTCTTAGAGGCCTTCTCCATTTTTGCCAAGCACCATCCAGATGTGCACCTGCTTATCCTGGGGGAAGGCCCAGAGAGA
CCCCGACTAGAAAAACTTGCTCACACCTTGGGGCTGACAAGCCGCGTGGCCTTTCTCGGATTTGTGGTCAACCCGTATCC
TTACCTTCGGGGGGCGAAGGCCTTGGTGATTACCAGTCGGTACGAAGGGTTTTCCATGGTGGCCCTCGAGGCCCTCGCCC
TGAGGGTTCCCGTGGTGGCCGTCGAGAGCGAGGGGGGCTTGCTTGAAGCCTTGGGGGATGGCCGTTTCGGTATCGTTACC
CCTCGCTCGCCCCAGGCTTTAGCCCACGCAATGGAGAGGGTGCTTTCCGATGGCTTTGCGTGGGACGAAACCGCCCTCAA
AGACCATTTGAACCAGTATTCCCCAGAAGCGGCGCTTAGGAGCTATATGAGCGTTCTGGAGGAGATATGGCGATAA

Upstream 100 bases:

>100_bases
GGTGCTGGCCATGCCATGGGTGGCGGTGGTGGCGGAGGGCTGGGTAAGCCTAGGGATGCTCGGGGCTTGGCTCCTTCTTA
AGTCTAGGAGGTAGAAGTCT

Downstream 100 bases:

>100_bases
AATCGGTGCTCTTTTTGCGCTCTAACCCAGTAGCACCCGACCCCCGGGTAGCCAAGGAAGCCCAGGCACTCGCAGACGCA
GGGTACAAGGTCGGGGTTGT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MRPDVAFALPALAGGGVERVYLDLAGAMVKEGLRVDFVLARAEGPLLAQLPQGVRLWDLGVPRRLRLLRAYTPLGVYLAQ
ARPRVVLPVWDYLDWVPLQAAWRSRTPFLWVLHNAPAYLKDVPNPVKRHTALWAARQTLKRAVNHPLGRVGAVSRGVAQA
FARFGGVPEERICVLPNPIHVDRVRRLSHENVPLPATPYFLALGRLHPQKGFSLLLEAFSIFAKHHPDVHLLILGEGPER
PRLEKLAHTLGLTSRVAFLGFVVNPYPYLRGAKALVITSRYEGFSMVALEALALRVPVVAVESEGGLLEALGDGRFGIVT
PRSPQALAHAMERVLSDGFAWDETALKDHLNQYSPEAALRSYMSVLEEIWR

Sequences:

>Translated_371_residues
MRPDVAFALPALAGGGVERVYLDLAGAMVKEGLRVDFVLARAEGPLLAQLPQGVRLWDLGVPRRLRLLRAYTPLGVYLAQ
ARPRVVLPVWDYLDWVPLQAAWRSRTPFLWVLHNAPAYLKDVPNPVKRHTALWAARQTLKRAVNHPLGRVGAVSRGVAQA
FARFGGVPEERICVLPNPIHVDRVRRLSHENVPLPATPYFLALGRLHPQKGFSLLLEAFSIFAKHHPDVHLLILGEGPER
PRLEKLAHTLGLTSRVAFLGFVVNPYPYLRGAKALVITSRYEGFSMVALEALALRVPVVAVESEGGLLEALGDGRFGIVT
PRSPQALAHAMERVLSDGFAWDETALKDHLNQYSPEAALRSYMSVLEEIWR
>Mature_371_residues
MRPDVAFALPALAGGGVERVYLDLAGAMVKEGLRVDFVLARAEGPLLAQLPQGVRLWDLGVPRRLRLLRAYTPLGVYLAQ
ARPRVVLPVWDYLDWVPLQAAWRSRTPFLWVLHNAPAYLKDVPNPVKRHTALWAARQTLKRAVNHPLGRVGAVSRGVAQA
FARFGGVPEERICVLPNPIHVDRVRRLSHENVPLPATPYFLALGRLHPQKGFSLLLEAFSIFAKHHPDVHLLILGEGPER
PRLEKLAHTLGLTSRVAFLGFVVNPYPYLRGAKALVITSRYEGFSMVALEALALRVPVVAVESEGGLLEALGDGRFGIVT
PRSPQALAHAMERVLSDGFAWDETALKDHLNQYSPEAALRSYMSVLEEIWR

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 41184; Mature: 41184

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPDVAFALPALAGGGVERVYLDLAGAMVKEGLRVDFVLARAEGPLLAQLPQGVRLWDLG
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCCEEEECC
VPRRLRLLRAYTPLGVYLAQARPRVVLPVWDYLDWVPLQAAWRSRTPFLWVLHNAPAYLK
CHHHHHHHHHHCCHHHHHHCCCCCEEEEHHHHHCCCCHHHHHCCCCCEEEEEECCCHHHH
DVPNPVKRHTALWAARQTLKRAVNHPLGRVGAVSRGVAQAFARFGGVPEERICVLPNPIH
HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
VDRVRRLSHENVPLPATPYFLALGRLHPQKGFSLLLEAFSIFAKHHPDVHLLILGEGPER
HHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
PRLEKLAHTLGLTSRVAFLGFVVNPYPYLRGAKALVITSRYEGFSMVALEALALRVPVVA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCEEE
VESEGGLLEALGDGRFGIVTPRSPQALAHAMERVLSDGFAWDETALKDHLNQYSPEAALR
EECCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHH
SYMSVLEEIWR
HHHHHHHHHCC
>Mature Secondary Structure
MRPDVAFALPALAGGGVERVYLDLAGAMVKEGLRVDFVLARAEGPLLAQLPQGVRLWDLG
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHCCCCCEEEECC
VPRRLRLLRAYTPLGVYLAQARPRVVLPVWDYLDWVPLQAAWRSRTPFLWVLHNAPAYLK
CHHHHHHHHHHCCHHHHHHCCCCCEEEEHHHHHCCCCHHHHHCCCCCEEEEEECCCHHHH
DVPNPVKRHTALWAARQTLKRAVNHPLGRVGAVSRGVAQAFARFGGVPEERICVLPNPIH
HCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
VDRVRRLSHENVPLPATPYFLALGRLHPQKGFSLLLEAFSIFAKHHPDVHLLILGEGPER
HHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
PRLEKLAHTLGLTSRVAFLGFVVNPYPYLRGAKALVITSRYEGFSMVALEALALRVPVVA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCEEE
VESEGGLLEALGDGRFGIVTPRSPQALAHAMERVLSDGFAWDETALKDHLNQYSPEAALR
EECCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHH
SYMSVLEEIWR
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]