| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980572
Identifier: 55980572
GI number: 55980572
Start: 570412
End: 571260
Strand: Reverse
Name: 55980572
Synonym: TTHA0603
Alternate gene names: NA
Gene position: 571260-570412 (Counterclockwise)
Preceding gene: 55980573
Following gene: 55980570
Centisome position: 30.88
GC content: 73.5
Gene sequence:
>849_bases GTGCCCTTCCGCACCCTGCTCGCCGTCCAGGCCGAGGCCAGGCCGGAGCATTACCGCACGGCGGAGGCCTTCAGGGAGCG GGTCTTCGCCCTCCTCGAGCCCCTAAGCGGCACCCCCGCCCCGAGGCTCGCCGCCTTCCCCGAGCTCTTCGGCCTCCCCC TCCTCCTGCACCTGGACGGCGGGCTCGCCCCCAAGGCCCTCCTCTTGGACCCCCTCCTCCCCTGGCGGCGGGCCCGGCGG GCCTACGGCGTCTTCCTCGAGGTCATGGCCGAGGCCGCACAGGCCTTCGGCGCCTACCTCCTCGCAGGCTCCCTCCTCTC CCCCCCCTACGAGGAGGAGCTCGCCCGGGGCCGGTTCAGCCGCACCCCCTTCTTCCAGAACCTCGCCCTCTTCTTCAACC CCAAGGGCCGCCTCCTCGCCCAGGTGCCCAAGATGGAGCTCACCCCCCCGGAAAGGTGGCTCCGGCGGGGCCGCTTCGGC CCCCACCTGGTGGAGACCGAGGCGGGGAAGGTGGGGATCCTCATCTGCCTGGACGGCTTTTACGAGCGGCACCTCGCCCG ACTGGACGCCCTGGGGGCGGAAATCCTCCTCCAGCCCTCCGCCAACCCCGCCCCCTGGGAAAGGCCCTGGCCCCCCGACC CCGCCCGCAAGGAAGGGGAGGTGTGGGTGGCCTCGGCCCAAGCGCGCCTCCTCGGCCGGGAGCACCTCCGCCTCCTCCTC AACCCCATGCTGAACGGGGAGGTGGCGGGCCTTGGCTTCCAGGGGCGAAGCGGGATCTACGCCCCCGGGGAGGCCCTCCT CCTGGCCCAGGCCCCCACCGGGGACGAGGCCCTACTCCTCCGCCTCTAG
Upstream 100 bases:
>100_bases AAGAACTACTACGGAGGCGCCTGATGTTCCTGGAGAAGTTCTCGGACTACGTCACCGGGGCCGTCCTCCCCGTGGACGGC GGGGCCACGGCCCTCTAGCC
Downstream 100 bases:
>100_bases GCGCTCGGGGTAGAGGCGCACGGGCACGGCCCGGACCAGGGCCTCCTCGAGCCGCTCCCAGGCCCGGTCCGCCACCTCCT TCTCCAGAAGCGGGGCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MPFRTLLAVQAEARPEHYRTAEAFRERVFALLEPLSGTPAPRLAAFPELFGLPLLLHLDGGLAPKALLLDPLLPWRRARR AYGVFLEVMAEAAQAFGAYLLAGSLLSPPYEEELARGRFSRTPFFQNLALFFNPKGRLLAQVPKMELTPPERWLRRGRFG PHLVETEAGKVGILICLDGFYERHLARLDALGAEILLQPSANPAPWERPWPPDPARKEGEVWVASAQARLLGREHLRLLL NPMLNGEVAGLGFQGRSGIYAPGEALLLAQAPTGDEALLLRL
Sequences:
>Translated_282_residues MPFRTLLAVQAEARPEHYRTAEAFRERVFALLEPLSGTPAPRLAAFPELFGLPLLLHLDGGLAPKALLLDPLLPWRRARR AYGVFLEVMAEAAQAFGAYLLAGSLLSPPYEEELARGRFSRTPFFQNLALFFNPKGRLLAQVPKMELTPPERWLRRGRFG PHLVETEAGKVGILICLDGFYERHLARLDALGAEILLQPSANPAPWERPWPPDPARKEGEVWVASAQARLLGREHLRLLL NPMLNGEVAGLGFQGRSGIYAPGEALLLAQAPTGDEALLLRL >Mature_281_residues PFRTLLAVQAEARPEHYRTAEAFRERVFALLEPLSGTPAPRLAAFPELFGLPLLLHLDGGLAPKALLLDPLLPWRRARRA YGVFLEVMAEAAQAFGAYLLAGSLLSPPYEEELARGRFSRTPFFQNLALFFNPKGRLLAQVPKMELTPPERWLRRGRFGP HLVETEAGKVGILICLDGFYERHLARLDALGAEILLQPSANPAPWERPWPPDPARKEGEVWVASAQARLLGREHLRLLLN PMLNGEVAGLGFQGRSGIYAPGEALLLAQAPTGDEALLLRL
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31241; Mature: 31110
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRTLLAVQAEARPEHYRTAEAFRERVFALLEPLSGTPAPRLAAFPELFGLPLLLHLDG CCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHCCCEEEEECC GLAPKALLLDPLLPWRRARRAYGVFLEVMAEAAQAFGAYLLAGSLLSPPYEEELARGRFS CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC RTPFFQNLALFFNPKGRLLAQVPKMELTPPERWLRRGRFGPHLVETEAGKVGILICLDGF CCCHHHCEEEEECCCCCEEEECCCCCCCCHHHHHHCCCCCCCEEECCCCCEEEEEEECHH YERHLARLDALGAEILLQPSANPAPWERPWPPDPARKEGEVWVASAQARLLGREHLRLLL HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH NPMLNGEVAGLGFQGRSGIYAPGEALLLAQAPTGDEALLLRL HHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEC >Mature Secondary Structure PFRTLLAVQAEARPEHYRTAEAFRERVFALLEPLSGTPAPRLAAFPELFGLPLLLHLDG CCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCHHHHCCCEEEEECC GLAPKALLLDPLLPWRRARRAYGVFLEVMAEAAQAFGAYLLAGSLLSPPYEEELARGRFS CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCC RTPFFQNLALFFNPKGRLLAQVPKMELTPPERWLRRGRFGPHLVETEAGKVGILICLDGF CCCHHHCEEEEECCCCCEEEECCCCCCCCHHHHHHCCCCCCCEEECCCCCEEEEEEECHH YERHLARLDALGAEILLQPSANPAPWERPWPPDPARKEGEVWVASAQARLLGREHLRLLL HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH NPMLNGEVAGLGFQGRSGIYAPGEALLLAQAPTGDEALLLRL HHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA