| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is hflX [H]
Identifier: 55980535
GI number: 55980535
Start: 527167
End: 528678
Strand: Direct
Name: hflX [H]
Synonym: TTHA0566
Alternate gene names: 55980535
Gene position: 527167-528678 (Clockwise)
Preceding gene: 55980533
Following gene: 55980537
Centisome position: 28.5
GC content: 72.35
Gene sequence:
>1512_bases GTGGGGAGGCCCTTGAGCCTCGTCCTGGACCGGGAGGGGCGGGTGGTGCGGGTGGCCGTGGGGGACGCCAAGGACGTTCC CTTCCCCGAGGAGGGGTGGAGCGAGAGGCGGCTTTCCGGCTACCGCCTCCTCCACACCCACCTGGGCCCCGGGGGGCTTT CCCGGCCCGACCTCTCCGTCCTCTTCCTCAGGCGGCTGGACAACCTGGCCGCCTTGGAGGTGGAGGCGGACGGGCGCCCG GGCCTTTTGCACCTCGCCTTCCTCTCGCCGCCCAGGGCCCTGGAGGAGGACTGGCGGGTCCTGCCGCCCAAGCCCTTCCA CCAGTACCTGGACCTGGACCTCTGGGGCGAGGTCATGGCCCTGGAGGAGGAGCTTTCCCGCCAGGCCCGGGTCCTCGAGG TCCGGGACGGGAGCGGGGAGCGGGCCCTCCTGGTGGGGGTGGACACGGGGGAGGGCCCGGAGGCGGAGGCGGTCTTGCGG GAGCTCGCCGAGCTGACCCGGACCGCGGGGGGCGTGCCGGTGAGGCAGATCCTGGTCTTCCGCAAGAGCCTGGACCCGCG GTACCTGGTGGGCCTCGGCAAGCTGGAGGAGCTCAAGAGCCTGGCCTACCACGAGAACGCCTCCACCCTCATCTTCGGCG TGGACCTCACCCCGGCCCAGGCCCGGGAGATTGAAAGGGTCACGGGCCTCAAGGTCCTGGACCGGACCCAGCTCATCCTG GACATCTTCGCCCTCCACGCCAAGACCCCCGAGGCCCAGGCCCAGGTGGAGCTGGCCCAGCTCCGTTACCTCCTCCCCCG GCTCGTGGGGAAGGGGAAGGAGATGAGCCGCCTCGGGGGCGGGATCGGGACCCGGGGCCCCGGGGAGACGAAGCTGGAGG TGGACCGGCGCCGCCTCCAGGACCGGATCGCCCACCTCTCCCGCAAGCTCCAGGACTACGCCCTCCGCCGCCAGGAGGCG AGGCAGAAGCGGAAGCGGCGGGGCGTGCCCTTGGTGGCGGTGGTGGGCTACACCAACGCCGGCAAGACCACCCTCCTCCG CGCCCTGACCCGCGCCGGGGAGGAGGGGGAGGACAAGCTCTTCGCCACCTTGCGCCCCCTCACCCGCAGGGGCTTCCTCC CCGGGGTGGGGGAGGTCCTCTTCACCGACACCGTGGGCTTCATCCGCCACATGCCGGAAGAGCTCCTCACCGCCTTCCGG GCGACCCTGGAGGAGGTGAGGGAGGCGGACGTCCTGGTCCACGTCCTGGACGCCTCGGAGGAGGGGGCGCTGGAGCGGCA CCGGGTGGTGCGGGACCTGCTTTTGGACCTCGGGGTGGAGGCCCCCGTGGTCCTCGCCCTCAACAAGGCGGACCGGGCGG CCCCCTACGACCTCTACTTCCTGGGGGAGCGCCTGGGGGGCGTTCCCGTGTCCGCCCTCAAGGGGACGGGGCTTAAGGAG CTCAAGGAGGCCCTCGCCCGGGCCCTGCTGGACCTTGGGGTCCGTCCCCAGGCCTGGGCTCAGTACACGTGA
Upstream 100 bases:
>100_bases CGAACTGAAGCGGATTTCCAACCTGTACCGGAGGCGCCTCCCCAAGGACCGGGTCCTCACCCCGGAGCTCGCCCACACCC TGGCGGCCCTCTCCGCCGAG
Downstream 100 bases:
>100_bases AAGCCCTTTAGCCCCGCCTCCTCCCCCCACTGGACCTCCACCGCCTCCACCCGGGCGAGGCGGGGGCCTTGCTTGAGGTG GTGGAGGAAGAGCTCCAGGG
Product: GTP-binding protein HflX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MGRPLSLVLDREGRVVRVAVGDAKDVPFPEEGWSERRLSGYRLLHTHLGPGGLSRPDLSVLFLRRLDNLAALEVEADGRP GLLHLAFLSPPRALEEDWRVLPPKPFHQYLDLDLWGEVMALEEELSRQARVLEVRDGSGERALLVGVDTGEGPEAEAVLR ELAELTRTAGGVPVRQILVFRKSLDPRYLVGLGKLEELKSLAYHENASTLIFGVDLTPAQAREIERVTGLKVLDRTQLIL DIFALHAKTPEAQAQVELAQLRYLLPRLVGKGKEMSRLGGGIGTRGPGETKLEVDRRRLQDRIAHLSRKLQDYALRRQEA RQKRKRRGVPLVAVVGYTNAGKTTLLRALTRAGEEGEDKLFATLRPLTRRGFLPGVGEVLFTDTVGFIRHMPEELLTAFR ATLEEVREADVLVHVLDASEEGALERHRVVRDLLLDLGVEAPVVLALNKADRAAPYDLYFLGERLGGVPVSALKGTGLKE LKEALARALLDLGVRPQAWAQYT
Sequences:
>Translated_503_residues MGRPLSLVLDREGRVVRVAVGDAKDVPFPEEGWSERRLSGYRLLHTHLGPGGLSRPDLSVLFLRRLDNLAALEVEADGRP GLLHLAFLSPPRALEEDWRVLPPKPFHQYLDLDLWGEVMALEEELSRQARVLEVRDGSGERALLVGVDTGEGPEAEAVLR ELAELTRTAGGVPVRQILVFRKSLDPRYLVGLGKLEELKSLAYHENASTLIFGVDLTPAQAREIERVTGLKVLDRTQLIL DIFALHAKTPEAQAQVELAQLRYLLPRLVGKGKEMSRLGGGIGTRGPGETKLEVDRRRLQDRIAHLSRKLQDYALRRQEA RQKRKRRGVPLVAVVGYTNAGKTTLLRALTRAGEEGEDKLFATLRPLTRRGFLPGVGEVLFTDTVGFIRHMPEELLTAFR ATLEEVREADVLVHVLDASEEGALERHRVVRDLLLDLGVEAPVVLALNKADRAAPYDLYFLGERLGGVPVSALKGTGLKE LKEALARALLDLGVRPQAWAQYT >Mature_502_residues GRPLSLVLDREGRVVRVAVGDAKDVPFPEEGWSERRLSGYRLLHTHLGPGGLSRPDLSVLFLRRLDNLAALEVEADGRPG LLHLAFLSPPRALEEDWRVLPPKPFHQYLDLDLWGEVMALEEELSRQARVLEVRDGSGERALLVGVDTGEGPEAEAVLRE LAELTRTAGGVPVRQILVFRKSLDPRYLVGLGKLEELKSLAYHENASTLIFGVDLTPAQAREIERVTGLKVLDRTQLILD IFALHAKTPEAQAQVELAQLRYLLPRLVGKGKEMSRLGGGIGTRGPGETKLEVDRRRLQDRIAHLSRKLQDYALRRQEAR QKRKRRGVPLVAVVGYTNAGKTTLLRALTRAGEEGEDKLFATLRPLTRRGFLPGVGEVLFTDTVGFIRHMPEELLTAFRA TLEEVREADVLVHVLDASEEGALERHRVVRDLLLDLGVEAPVVLALNKADRAAPYDLYFLGERLGGVPVSALKGTGLKEL KEALARALLDLGVRPQAWAQYT
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=234, Percent_Identity=36.7521367521368, Blast_Score=126, Evalue=5e-29, Organism=Homo sapiens, GI310133116, Length=226, Percent_Identity=37.1681415929204, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI310124269, Length=210, Percent_Identity=38.5714285714286, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI310124267, Length=210, Percent_Identity=38.5714285714286, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI310124171, Length=210, Percent_Identity=38.5714285714286, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI310124169, Length=210, Percent_Identity=38.5714285714286, Blast_Score=124, Evalue=2e-28, Organism=Escherichia coli, GI1790615, Length=359, Percent_Identity=41.7827298050139, Blast_Score=246, Evalue=3e-66, Organism=Caenorhabditis elegans, GI17561038, Length=314, Percent_Identity=29.9363057324841, Blast_Score=121, Evalue=9e-28, Organism=Drosophila melanogaster, GI24650079, Length=312, Percent_Identity=35.5769230769231, Blast_Score=121, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 55818; Mature: 55687
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRPLSLVLDREGRVVRVAVGDAKDVPFPEEGWSERRLSGYRLLHTHLGPGGLSRPDLSV CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCHHH LFLRRLDNLAALEVEADGRPGLLHLAFLSPPRALEEDWRVLPPKPFHQYLDLDLWGEVMA HHHHHHCCCEEEEEECCCCCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHCHHHHHHHHH LEEELSRQARVLEVRDGSGERALLVGVDTGEGPEAEAVLRELAELTRTAGGVPVRQILVF HHHHHHHHHEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH RKSLDPRYLVGLGKLEELKSLAYHENASTLIFGVDLTPAQAREIERVTGLKVLDRTQLIL HHCCCCCEEECCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCHHHHHHHHHHH DIFALHAKTPEAQAQVELAQLRYLLPRLVGKGKEMSRLGGGIGTRGPGETKLEVDRRRLQ HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHH DRIAHLSRKLQDYALRRQEARQKRKRRGVPLVAVVGYTNAGKTTLLRALTRAGEEGEDKL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHH FATLRPLTRRGFLPGVGEVLFTDTVGFIRHMPEELLTAFRATLEEVREADVLVHVLDASE HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEEEECCCC EGALERHRVVRDLLLDLGVEAPVVLALNKADRAAPYDLYFLGERLGGVPVSALKGTGLKE CCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHEEHHHHHCCCCHHHHCCCCHHH LKEALARALLDLGVRPQAWAQYT HHHHHHHHHHHCCCCCCHHCCCC >Mature Secondary Structure GRPLSLVLDREGRVVRVAVGDAKDVPFPEEGWSERRLSGYRLLHTHLGPGGLSRPDLSV CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCHHH LFLRRLDNLAALEVEADGRPGLLHLAFLSPPRALEEDWRVLPPKPFHQYLDLDLWGEVMA HHHHHHCCCEEEEEECCCCCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHCHHHHHHHHH LEEELSRQARVLEVRDGSGERALLVGVDTGEGPEAEAVLRELAELTRTAGGVPVRQILVF HHHHHHHHHEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH RKSLDPRYLVGLGKLEELKSLAYHENASTLIFGVDLTPAQAREIERVTGLKVLDRTQLIL HHCCCCCEEECCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCHHHHHHHHHHH DIFALHAKTPEAQAQVELAQLRYLLPRLVGKGKEMSRLGGGIGTRGPGETKLEVDRRRLQ HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHH DRIAHLSRKLQDYALRRQEARQKRKRRGVPLVAVVGYTNAGKTTLLRALTRAGEEGEDKL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHH FATLRPLTRRGFLPGVGEVLFTDTVGFIRHMPEELLTAFRATLEEVREADVLVHVLDASE HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEEEECCCC EGALERHRVVRDLLLDLGVEAPVVLALNKADRAAPYDLYFLGERLGGVPVSALKGTGLKE CCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHEEHHHHHCCCCHHHHCCCCHHH LKEALARALLDLGVRPQAWAQYT HHHHHHHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]