| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980491
Identifier: 55980491
GI number: 55980491
Start: 485068
End: 486798
Strand: Direct
Name: 55980491
Synonym: TTHA0522
Alternate gene names: NA
Gene position: 485068-486798 (Clockwise)
Preceding gene: 55980490
Following gene: 55980492
Centisome position: 26.22
GC content: 68.46
Gene sequence:
>1731_bases GTGAAGCGTATCGGCGTGGTCTTGGGCCGGCGGGAGGCCACCCCCTTGGAGTTCTGGGTGGGGGTGGAGGGGGACGGGCT TTTGCGCCTGGACGACCTGGTGGTGGTGGAGGGCTTCCACCCCCAGGTGGGCCAGGTGCGCTTCTTCGGCATGGTGGACC ACGTGGCCAAGGTCCACGAGGGGGAAAGCTTTGACACCGACACCTTCCTCGCGGTGGAGGGCAAGATCCCCGTGAGCCTG GCCTACGTGGCCCACGTGAGCGTGACCCGCATCCTCCCCGAGGAGTTCTTCCCCCCGGACCCGGGCTCCCCCGTGTACCT GGCCCAGGAGGAGGACCTGGAGCTCGCCCTCTACTACGACGCCATGCGCAACCAACGGGGAAGCACCAAGCTCCCCGCCG GGCTCCTTAAGAACGGGGAGGTGGCCTACCTCAACCTGGAGTTCTTAAACGGCGTCAAGGGCGGGCACGTGAACATCTCC GGCATCAGCGGGGTGGCGGCCAAGACGAGCTACGCCACCTTCCTCCTCAAGAGCCTTCTGGAAAGCGGGGTCCTGGAGGA CGCCCACCAGGCCAGGGTCCTCCTCTTCAACGTCAAGGGGGAGGACCTCTTCTTCCTGGACAAGCCCAACGCCCGCCTCA CCGAGGAGGCGCGGAAGGCCTACGCGCGGCTTGGCCTCCCCGCGACCCCCTTCCAGAGCGTGGCCTTCCTCGCCCCGCCC AAGAAGGCGGGCTACCTCCCGGACGTGGACACCCGGCTGGAGGGGGTGGAGGCCTACCACTGGGACCTGGTCCAGTTCTG CCAGAGGGGCCTCCTCCCCTTCCTCTTCGCCGACCGCGCCGCCATGACCAACCTGGGCTTCCTGGTGGCCCACGTGACGG AGAAGCTCAAGCGCCTCGCCGAGGGGCAGAAGGGCCCCCACCTCCAGGTGGAGGACTGGCCCGGGGGGGAGGCTTCCGAG GGGATGAGCTTTGACCAGCTGGGAAAGGCGCGCCTCAAGAGCTTCTCCGACCTCGTGCGCTACCTGGAGTACAAGCTCCT GGGCCCCGAGACCGGGGAAGGGGAGGGGGACCGGGGCTGGACCGCAAGGCAGGCCAAGGGGACCCTGGAGGCCTTCGTCC GCCGCCTCCGCTCCAGCGTGGAGAACGTGGCCCACCTCGTCCGGGGGGACCGGCCCGGAAGCCCCCCGGACCCCCTTTCG GGGAAGGCCCAGGTGCACGTGGTGGACCTGGCCAAGCTCTCCCCCCAGGCGCAGATGTTCGTGGTGGGAAGCCTCCTCAA GGACCTCTTTGAAAGGAAGGAGCGGGGGCAGTACCGGGGGAGGGTCTTCATCGTCCTGGACGAGCTCAACAAGTACGCCC CCAGGGAGGAGGAAAGCCCCATCAAGGACGTGCTCCTGGACATCGCCGAGAGGGGCCGCTCCCTCGGGGTGATCCTCATC GGGGCCCAGCAGACGGCGAGCGAGGTGGAAAGGCGCGTGGTGGGGAATGCGGCCATAAGGGTGGTGGGCCGCCTGGACGC CGCCGAGGCGGAGCGCCCCGAGTACCGCTACCTTCCCACCTCCTTCCGCCAAAGGGCCCTCATCCTTCCCCAGGGGGCGG TGATCCTCCACCAGCCCGAGATCCCCGTGCCCCTCCTTGTCCACTTCCCTTTCCCCGCCTGGGCCACCAAGAGGGAGGAG GTCCTGGAGGACAACTCCGCCGAGGCCCTGCGCCGGGAGTTCTTCAGGTAG
Upstream 100 bases:
>100_bases ACCTCCTGCCCGTGGGGGGGCTGGAGCGGGAGCTTTCCCGCAGGATGGGCAGGCCCGAGGTGGTGGGCCGCATGCTGGCG AGGTACTTAGGAGGTGCGAG
Downstream 100 bases:
>100_bases GATGGCCTCGCCATGAAGAAGACCCCCCTTTACGAGGCCCACCTTCGCCTGGGCGCCCGGATGGTGGACTTCGCCGGGTA CCTCCTCCCCCTCCAGTACA
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; ATPase
Number of amino acids: Translated: 576; Mature: 576
Protein sequence:
>576_residues MKRIGVVLGRREATPLEFWVGVEGDGLLRLDDLVVVEGFHPQVGQVRFFGMVDHVAKVHEGESFDTDTFLAVEGKIPVSL AYVAHVSVTRILPEEFFPPDPGSPVYLAQEEDLELALYYDAMRNQRGSTKLPAGLLKNGEVAYLNLEFLNGVKGGHVNIS GISGVAAKTSYATFLLKSLLESGVLEDAHQARVLLFNVKGEDLFFLDKPNARLTEEARKAYARLGLPATPFQSVAFLAPP KKAGYLPDVDTRLEGVEAYHWDLVQFCQRGLLPFLFADRAAMTNLGFLVAHVTEKLKRLAEGQKGPHLQVEDWPGGEASE GMSFDQLGKARLKSFSDLVRYLEYKLLGPETGEGEGDRGWTARQAKGTLEAFVRRLRSSVENVAHLVRGDRPGSPPDPLS GKAQVHVVDLAKLSPQAQMFVVGSLLKDLFERKERGQYRGRVFIVLDELNKYAPREEESPIKDVLLDIAERGRSLGVILI GAQQTASEVERRVVGNAAIRVVGRLDAAEAERPEYRYLPTSFRQRALILPQGAVILHQPEIPVPLLVHFPFPAWATKREE VLEDNSAEALRREFFR
Sequences:
>Translated_576_residues MKRIGVVLGRREATPLEFWVGVEGDGLLRLDDLVVVEGFHPQVGQVRFFGMVDHVAKVHEGESFDTDTFLAVEGKIPVSL AYVAHVSVTRILPEEFFPPDPGSPVYLAQEEDLELALYYDAMRNQRGSTKLPAGLLKNGEVAYLNLEFLNGVKGGHVNIS GISGVAAKTSYATFLLKSLLESGVLEDAHQARVLLFNVKGEDLFFLDKPNARLTEEARKAYARLGLPATPFQSVAFLAPP KKAGYLPDVDTRLEGVEAYHWDLVQFCQRGLLPFLFADRAAMTNLGFLVAHVTEKLKRLAEGQKGPHLQVEDWPGGEASE GMSFDQLGKARLKSFSDLVRYLEYKLLGPETGEGEGDRGWTARQAKGTLEAFVRRLRSSVENVAHLVRGDRPGSPPDPLS GKAQVHVVDLAKLSPQAQMFVVGSLLKDLFERKERGQYRGRVFIVLDELNKYAPREEESPIKDVLLDIAERGRSLGVILI GAQQTASEVERRVVGNAAIRVVGRLDAAEAERPEYRYLPTSFRQRALILPQGAVILHQPEIPVPLLVHFPFPAWATKREE VLEDNSAEALRREFFR >Mature_576_residues MKRIGVVLGRREATPLEFWVGVEGDGLLRLDDLVVVEGFHPQVGQVRFFGMVDHVAKVHEGESFDTDTFLAVEGKIPVSL AYVAHVSVTRILPEEFFPPDPGSPVYLAQEEDLELALYYDAMRNQRGSTKLPAGLLKNGEVAYLNLEFLNGVKGGHVNIS GISGVAAKTSYATFLLKSLLESGVLEDAHQARVLLFNVKGEDLFFLDKPNARLTEEARKAYARLGLPATPFQSVAFLAPP KKAGYLPDVDTRLEGVEAYHWDLVQFCQRGLLPFLFADRAAMTNLGFLVAHVTEKLKRLAEGQKGPHLQVEDWPGGEASE GMSFDQLGKARLKSFSDLVRYLEYKLLGPETGEGEGDRGWTARQAKGTLEAFVRRLRSSVENVAHLVRGDRPGSPPDPLS GKAQVHVVDLAKLSPQAQMFVVGSLLKDLFERKERGQYRGRVFIVLDELNKYAPREEESPIKDVLLDIAERGRSLGVILI GAQQTASEVERRVVGNAAIRVVGRLDAAEAERPEYRYLPTSFRQRALILPQGAVILHQPEIPVPLLVHFPFPAWATKREE VLEDNSAEALRREFFR
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63975; Mature: 63975
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIGVVLGRREATPLEFWVGVEGDGLLRLDDLVVVEGFHPQVGQVRFFGMVDHVAKVHE CCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHC GESFDTDTFLAVEGKIPVSLAYVAHVSVTRILPEEFFPPDPGSPVYLAQEEDLELALYYD CCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEH AMRNQRGSTKLPAGLLKNGEVAYLNLEFLNGVKGGHVNISGISGVAAKTSYATFLLKSLL HHHCCCCCCCCCHHHHCCCCEEEEEEHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH ESGVLEDAHQARVLLFNVKGEDLFFLDKPNARLTEEARKAYARLGLPATPFQSVAFLAPP HCCCCCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHCEEEECCC KKAGYLPDVDTRLEGVEAYHWDLVQFCQRGLLPFLFADRAAMTNLGFLVAHVTEKLKRLA CCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGQKGPHLQVEDWPGGEASEGMSFDQLGKARLKSFSDLVRYLEYKLLGPETGEGEGDRGW CCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC TARQAKGTLEAFVRRLRSSVENVAHLVRGDRPGSPPDPLSGKAQVHVVDLAKLSPQAQMF CCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHH VVGSLLKDLFERKERGQYRGRVFIVLDELNKYAPREEESPIKDVLLDIAERGRSLGVILI HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE GAQQTASEVERRVVGNAAIRVVGRLDAAEAERPEYRYLPTSFRQRALILPQGAVILHQPE ECCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEECCHHHCCCEEECCCCEEEEECCC IPVPLLVHFPFPAWATKREEVLEDNSAEALRREFFR CCCEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure MKRIGVVLGRREATPLEFWVGVEGDGLLRLDDLVVVEGFHPQVGQVRFFGMVDHVAKVHE CCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHC GESFDTDTFLAVEGKIPVSLAYVAHVSVTRILPEEFFPPDPGSPVYLAQEEDLELALYYD CCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEH AMRNQRGSTKLPAGLLKNGEVAYLNLEFLNGVKGGHVNISGISGVAAKTSYATFLLKSLL HHHCCCCCCCCCHHHHCCCCEEEEEEHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH ESGVLEDAHQARVLLFNVKGEDLFFLDKPNARLTEEARKAYARLGLPATPFQSVAFLAPP HCCCCCCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHCEEEECCC KKAGYLPDVDTRLEGVEAYHWDLVQFCQRGLLPFLFADRAAMTNLGFLVAHVTEKLKRLA CCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGQKGPHLQVEDWPGGEASEGMSFDQLGKARLKSFSDLVRYLEYKLLGPETGEGEGDRGW CCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC TARQAKGTLEAFVRRLRSSVENVAHLVRGDRPGSPPDPLSGKAQVHVVDLAKLSPQAQMF CCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHH VVGSLLKDLFERKERGQYRGRVFIVLDELNKYAPREEESPIKDVLLDIAERGRSLGVILI HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE GAQQTASEVERRVVGNAAIRVVGRLDAAEAERPEYRYLPTSFRQRALILPQGAVILHQPE ECCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEECCHHHCCCEEECCCCEEEEECCC IPVPLLVHFPFPAWATKREEVLEDNSAEALRREFFR CCCEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA