| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is maeA [H]
Identifier: 55980489
GI number: 55980489
Start: 482455
End: 484185
Strand: Direct
Name: maeA [H]
Synonym: TTHA0520
Alternate gene names: 55980489
Gene position: 482455-484185 (Clockwise)
Preceding gene: 55980488
Following gene: 55980490
Centisome position: 26.08
GC content: 68.63
Gene sequence:
>1731_bases ATGCCCATAAGCCGCTACTACGACGTCAAGCGGGACGAGAAAGGCGAGCGCTACCTGGAGCCCTACGTCACGGGTTTTTT GCTCCTTAGGCTTCCCCTCCTCAACAAGGGCACGGCCTTCACCGAGGAGGAGCGCCGCCTCTTGGGCCTCGAGGGCCTCC TCCCCCCCCACGTCCACACCCTGGAGGAGCAGAAGGAAAGGGTCTACCGCCGCTACCGCCTGATCCAAAGTCCCTTGGAG AAGCACATCTACCTGCGCCACCTCCAGGACCGGAACGAGGTCCTCTTCTACGCCCTTGTGGTGGACCACCTGGAGGAGAT GCTCCCCATCCTCTACACCCCCACGGTGGGGGAGGCGGTGCGGGAGTTCTCCCACATCTACCGCTACCCCCGGGGCTTCA CCGCGAGCACCAAAAACATTGACCGGATAGACGAGGCCCTCCAGAACGTCCCCTTGGAGGACGTGCGCCTCATCGTGGCC ACGGACTCCTCCGCCATCCTGGGGATCGGGGACCAGGGCTACGGGGGGATGGCCATCAGCATCGGCAAGCTCACCCTCTA CACCGCCGCGGGCGGGGTGGGCCCCGACAAGACCCTCCCCGTGGAGCTGGACGTGGGCACGGACCGGGAGGACCTCCTCA AGGACCCCCTCTACCTCGGGGTGCGGCACCGGCGCTTGCGGGGGGAGGAGTACTTCCGCTTCCTGGACCGCTTCGTGGAG GCGGTGAGGCGGCGCTACCCCAAGGCCCTCATCCAGTGGGAGGACTTCGCCAAGGAGACGGCCTTCCAGGTGTTGGAGCG CTACCGCAAGGTCATCCCCTCCTTCAACGACGACATCCAGGGCACGGGGGCCGTGGCCCTGGCCGGGGTGCTCTCCGCCT GCCGCTTAAAGGGGGAGAGGCTTTCGGACCAGGTGGTGGTGGTCTATGGGGCGGGGGCCGGGGGGATCGGGGTGGCCTGG GCCTTGGTGGAGGGGATGAAGCGGGAGGGCCTCTCCGAGGAGGAGGCCAAGGCCCGGGTCCTCGTCCTGGACTCCAAGGG CCTCCTCGTGGAGGGGCGGAGCATGGAGGACTACAAGAGGCCCTACGCCCAGAGGCCCGAGCGCCTATGGGGTTGGCGCT TTGCCGGGGAGTACCCCAACCTCCTGGAGACCATCACGAACGCCCGAGCCACGGTCCTCCTCGGCCTTTCCGGCCAGGCG GGAAGCTTCACCGAGCCCGTGGTGCGGGCCATGCTGGCGAACACGCCCCGCCCCGTGATCTTCCCCCTCTCCAACCCCAC CTCGGCCACGGAGGCCCTTCCGGACGACCTCGTCTACTGGACGGAGGGGCGGGCCCTGGTGGCCGCGGGAAGCCCCTTCC CCCCGGTGGGCTTCAAGGGGCGCACCGTCCCCATCGGCCAGGGGAACAACGCCTTCGTCTTCCCCGGGCTCGGCCTCGGG GCGGTGCTCTCCCGGGCCCGGGAGGTGACGGACGGGATGGTCCTCGAGGCCGCCTACGCCCTTTACGACTACACCCGGGA GCACTTCCCCGAGCGGATCTACCCCCCGGTGGGGCGGTTGCGGGAGGTCTCCCCCTACGTGGCCGCCCGGGTGATGCAGA GGGCCCTGGAGGAAGGGGTGGCGGAGGAGGCTAGGGTCCAGGGGCTTACCCTCGAGGCCCTCCTGGACTTCGTCAAAAGC CGCTTCTGGGAGCCCCGGTACCTCCCCTACCGCCCCGCCCCGGTAATCTAG
Upstream 100 bases:
>100_bases CGTCTGGACCCCGCCCTGGACCCCCGCCCGCATGACGGAGGAGGGCAAGCGCATGATGCGCATGTTCGGCTTCAACGTCT AGGCGTGGGAGCGTGGCCCC
Downstream 100 bases:
>100_bases GGGCATGGCCTGGCGCCTCTTGCGCCTCGAGCCCCTGGGGCTCCAAGAAGGCCCCGCCTCCCCCCCGGAGCCCGGGGCCT TCCGGCTCCTGGAGGAGCCC
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 576; Mature: 575
Protein sequence:
>576_residues MPISRYYDVKRDEKGERYLEPYVTGFLLLRLPLLNKGTAFTEEERRLLGLEGLLPPHVHTLEEQKERVYRRYRLIQSPLE KHIYLRHLQDRNEVLFYALVVDHLEEMLPILYTPTVGEAVREFSHIYRYPRGFTASTKNIDRIDEALQNVPLEDVRLIVA TDSSAILGIGDQGYGGMAISIGKLTLYTAAGGVGPDKTLPVELDVGTDREDLLKDPLYLGVRHRRLRGEEYFRFLDRFVE AVRRRYPKALIQWEDFAKETAFQVLERYRKVIPSFNDDIQGTGAVALAGVLSACRLKGERLSDQVVVVYGAGAGGIGVAW ALVEGMKREGLSEEEAKARVLVLDSKGLLVEGRSMEDYKRPYAQRPERLWGWRFAGEYPNLLETITNARATVLLGLSGQA GSFTEPVVRAMLANTPRPVIFPLSNPTSATEALPDDLVYWTEGRALVAAGSPFPPVGFKGRTVPIGQGNNAFVFPGLGLG AVLSRAREVTDGMVLEAAYALYDYTREHFPERIYPPVGRLREVSPYVAARVMQRALEEGVAEEARVQGLTLEALLDFVKS RFWEPRYLPYRPAPVI
Sequences:
>Translated_576_residues MPISRYYDVKRDEKGERYLEPYVTGFLLLRLPLLNKGTAFTEEERRLLGLEGLLPPHVHTLEEQKERVYRRYRLIQSPLE KHIYLRHLQDRNEVLFYALVVDHLEEMLPILYTPTVGEAVREFSHIYRYPRGFTASTKNIDRIDEALQNVPLEDVRLIVA TDSSAILGIGDQGYGGMAISIGKLTLYTAAGGVGPDKTLPVELDVGTDREDLLKDPLYLGVRHRRLRGEEYFRFLDRFVE AVRRRYPKALIQWEDFAKETAFQVLERYRKVIPSFNDDIQGTGAVALAGVLSACRLKGERLSDQVVVVYGAGAGGIGVAW ALVEGMKREGLSEEEAKARVLVLDSKGLLVEGRSMEDYKRPYAQRPERLWGWRFAGEYPNLLETITNARATVLLGLSGQA GSFTEPVVRAMLANTPRPVIFPLSNPTSATEALPDDLVYWTEGRALVAAGSPFPPVGFKGRTVPIGQGNNAFVFPGLGLG AVLSRAREVTDGMVLEAAYALYDYTREHFPERIYPPVGRLREVSPYVAARVMQRALEEGVAEEARVQGLTLEALLDFVKS RFWEPRYLPYRPAPVI >Mature_575_residues PISRYYDVKRDEKGERYLEPYVTGFLLLRLPLLNKGTAFTEEERRLLGLEGLLPPHVHTLEEQKERVYRRYRLIQSPLEK HIYLRHLQDRNEVLFYALVVDHLEEMLPILYTPTVGEAVREFSHIYRYPRGFTASTKNIDRIDEALQNVPLEDVRLIVAT DSSAILGIGDQGYGGMAISIGKLTLYTAAGGVGPDKTLPVELDVGTDREDLLKDPLYLGVRHRRLRGEEYFRFLDRFVEA VRRRYPKALIQWEDFAKETAFQVLERYRKVIPSFNDDIQGTGAVALAGVLSACRLKGERLSDQVVVVYGAGAGGIGVAWA LVEGMKREGLSEEEAKARVLVLDSKGLLVEGRSMEDYKRPYAQRPERLWGWRFAGEYPNLLETITNARATVLLGLSGQAG SFTEPVVRAMLANTPRPVIFPLSNPTSATEALPDDLVYWTEGRALVAAGSPFPPVGFKGRTVPIGQGNNAFVFPGLGLGA VLSRAREVTDGMVLEAAYALYDYTREHFPERIYPPVGRLREVSPYVAARVMQRALEEGVAEEARVQGLTLEALLDFVKSR FWEPRYLPYRPAPVI
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=522, Percent_Identity=43.4865900383142, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI62420882, Length=525, Percent_Identity=41.5238095238095, Blast_Score=409, Evalue=1e-114, Organism=Homo sapiens, GI62420880, Length=525, Percent_Identity=41.5238095238095, Blast_Score=409, Evalue=1e-114, Organism=Homo sapiens, GI239049447, Length=525, Percent_Identity=41.5238095238095, Blast_Score=409, Evalue=1e-114, Organism=Homo sapiens, GI4505145, Length=559, Percent_Identity=40.9660107334526, Blast_Score=398, Evalue=1e-111, Organism=Homo sapiens, GI270265879, Length=466, Percent_Identity=42.9184549356223, Blast_Score=362, Evalue=1e-100, Organism=Escherichia coli, GI87081919, Length=561, Percent_Identity=46.1675579322638, Blast_Score=499, Evalue=1e-142, Organism=Escherichia coli, GI1788806, Length=387, Percent_Identity=27.1317829457364, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17537199, Length=520, Percent_Identity=43.0769230769231, Blast_Score=391, Evalue=1e-109, Organism=Saccharomyces cerevisiae, GI6322823, Length=576, Percent_Identity=42.3611111111111, Blast_Score=440, Evalue=1e-124, Organism=Drosophila melanogaster, GI281362672, Length=526, Percent_Identity=41.254752851711, Blast_Score=402, Evalue=1e-112, Organism=Drosophila melanogaster, GI281362674, Length=526, Percent_Identity=41.254752851711, Blast_Score=402, Evalue=1e-112, Organism=Drosophila melanogaster, GI21356279, Length=526, Percent_Identity=41.254752851711, Blast_Score=402, Evalue=1e-112, Organism=Drosophila melanogaster, GI24646386, Length=556, Percent_Identity=38.1294964028777, Blast_Score=385, Evalue=1e-107, Organism=Drosophila melanogaster, GI24646388, Length=556, Percent_Identity=38.1294964028777, Blast_Score=385, Evalue=1e-107, Organism=Drosophila melanogaster, GI78707242, Length=514, Percent_Identity=37.15953307393, Blast_Score=338, Evalue=4e-93, Organism=Drosophila melanogaster, GI78707238, Length=514, Percent_Identity=37.15953307393, Blast_Score=338, Evalue=4e-93, Organism=Drosophila melanogaster, GI78707240, Length=511, Percent_Identity=37.1819960861057, Blast_Score=338, Evalue=5e-93, Organism=Drosophila melanogaster, GI78707232, Length=510, Percent_Identity=33.921568627451, Blast_Score=314, Evalue=1e-85, Organism=Drosophila melanogaster, GI281363505, Length=513, Percent_Identity=33.5282651072125, Blast_Score=312, Evalue=4e-85, Organism=Drosophila melanogaster, GI78707236, Length=513, Percent_Identity=33.5282651072125, Blast_Score=312, Evalue=4e-85, Organism=Drosophila melanogaster, GI281363503, Length=511, Percent_Identity=33.2681017612524, Blast_Score=308, Evalue=5e-84, Organism=Drosophila melanogaster, GI19922384, Length=555, Percent_Identity=31.1711711711712, Blast_Score=263, Evalue=3e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 64814; Mature: 64683
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISRYYDVKRDEKGERYLEPYVTGFLLLRLPLLNKGTAFTEEERRLLGLEGLLPPHVHT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHH LEEQKERVYRRYRLIQSPLEKHIYLRHLQDRNEVLFYALVVDHLEEMLPILYTPTVGEAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCHHHHH REFSHIYRYPRGFTASTKNIDRIDEALQNVPLEDVRLIVATDSSAILGIGDQGYGGMAIS HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHEEEEEEECCCEEEECCCCCCCCEEEE IGKLTLYTAAGGVGPDKTLPVELDVGTDREDLLKDPLYLGVRHRRLRGEEYFRFLDRFVE ECCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHH AVRRRYPKALIQWEDFAKETAFQVLERYRKVIPSFNDDIQGTGAVALAGVLSACRLKGER HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC LSDQVVVVYGAGAGGIGVAWALVEGMKREGLSEEEAKARVLVLDSKGLLVEGRSMEDYKR CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHCCEEEEEEECCCCEEECCCCHHHHC PYAQRPERLWGWRFAGEYPNLLETITNARATVLLGLSGQAGSFTEPVVRAMLANTPRPVI HHHCCCHHHHCEEECCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEE FPLSNPTSATEALPDDLVYWTEGRALVAAGSPFPPVGFKGRTVPIGQGNNAFVFPGLGLG EECCCCCCHHHCCCCCCEEEECCCEEEECCCCCCCCCCCCCEEECCCCCCEEEECCCCHH AVLSRAREVTDGMVLEAAYALYDYTREHFPERIYPPVGRLREVSPYVAARVMQRALEEGV HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCC AEEARVQGLTLEALLDFVKSRFWEPRYLPYRPAPVI HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PISRYYDVKRDEKGERYLEPYVTGFLLLRLPLLNKGTAFTEEERRLLGLEGLLPPHVHT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHH LEEQKERVYRRYRLIQSPLEKHIYLRHLQDRNEVLFYALVVDHLEEMLPILYTPTVGEAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCHHHHH REFSHIYRYPRGFTASTKNIDRIDEALQNVPLEDVRLIVATDSSAILGIGDQGYGGMAIS HHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHEEEEEEECCCEEEECCCCCCCCEEEE IGKLTLYTAAGGVGPDKTLPVELDVGTDREDLLKDPLYLGVRHRRLRGEEYFRFLDRFVE ECCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHH AVRRRYPKALIQWEDFAKETAFQVLERYRKVIPSFNDDIQGTGAVALAGVLSACRLKGER HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC LSDQVVVVYGAGAGGIGVAWALVEGMKREGLSEEEAKARVLVLDSKGLLVEGRSMEDYKR CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHCCEEEEEEECCCCEEECCCCHHHHC PYAQRPERLWGWRFAGEYPNLLETITNARATVLLGLSGQAGSFTEPVVRAMLANTPRPVI HHHCCCHHHHCEEECCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEE FPLSNPTSATEALPDDLVYWTEGRALVAAGSPFPPVGFKGRTVPIGQGNNAFVFPGLGLG EECCCCCCHHHCCCCCCEEEECCCEEEECCCCCCCCCCCCCEEECCCCCCEEEECCCCHH AVLSRAREVTDGMVLEAAYALYDYTREHFPERIYPPVGRLREVSPYVAARVMQRALEEGV HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCC AEEARVQGLTLEALLDFVKSRFWEPRYLPYRPAPVI HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA