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The map label for this gene is 55980484

Identifier: 55980484

GI number: 55980484

Start: 479389

End: 480345

Strand: Direct

Name: 55980484

Synonym: TTHA0515

Alternate gene names: NA

Gene position: 479389-480345 (Clockwise)

Preceding gene: 55980478

Following gene: 55980485

Centisome position: 25.92

GC content: 69.49

Gene sequence:

>957_bases
ATGGACGCGCTGGAGCTTTTGCGCCTCAACCTCCTCTCCCCCATGGTCCTCGCCTACTTCTTGGGGGTCGCGGCCCGGCT
TTTAAAGAGCGACCTCGCCTTCCCCGAGGCCCTCTACACCGCCCTTTCCATCTACCTCCTCTTTGCCATCGGCTTCAAGG
GCGGGGTGGAGCTTTCCCACACGCCCTTGGCTGTGGTGCTCCTTCCCGCCCTCCTCACCCTGGCCCTGGGGCTTTTCCGC
CCCTTCCCCGCCTACCTCCTCGCCCGGCGGTTCCTCCGGGTGGGGCGGGAGGACGCGGCCGCCCTCGCGGCCCACTACGG
CTCCGTCTCCGCCGTCACCTTCCTCGCCGCCCTCACCTTCGTCCAGGCCGTGGGGGACGCCGCCCCGGGGTTCATGCCCA
CCCTGGTGGCCCTCCTGGAGGTTCCGGGGATCGTGGTGGCCCTCCTCCTCGCCAAGCGAAGGGAAGGGCGCCTGGGGGAG
GCGTTGCACGAGGTCCTCACCGGCAAGAGCGTGGTCCTCCTCCTCGGGGGGCTTCTCGTGGGCCTCCTTTCCGGCGAGGA
GGGGATGAAGAAGGTGGAGGCCTTCTTCGTGGAGCCCTTCCAGGGCGCCCTCACCCTCTTCCTCCTGGACCTCGGGATGG
TGGCGGCCTCGAGGCTTTCCGTCCTGCGGCAGGTGGGCCTTCGCCTCGTCCTCTTCGGCGTGGGCCTCGCCCTCTTCCAC
GGGGCCTTGGGGGTGTACCTGGGCCTCCTTGTGGGCCTCGGGGTAGGGGGGGCGGCGGTGCTTGGGGCCATGGCGGCCAG
CGCCTCCTACATCGCCGCCCCCGCCGCCGTGAGGATCGCCCTTCCCGAGGCGAACCCCAGTTTGTACCTCACGGCGAGCC
TCGCCGTCACCTTTCCCTTTAACCTGGTCCTGGGGATTCCCCTCTACCGCGCCTTGGCGGTCCTTTGGGGAGGTTAG

Upstream 100 bases:

>100_bases
TGGTCTCCCAGTCGGAGCGGGAACCCATGATCAGGCCTACCAACGGCGCCATCGTACCGGATTGTAAAAGCCCTTCCCCC
TTTGGTAAAGCGGTGGGGGT

Downstream 100 bases:

>100_bases
GCCATGGACCTGGTGCCCTTGAAGCTCGTGACCATCGTGGCGGAAAGCCTTCTGGAAAAGCGGCTCGTGGAGGAGGTCAA
GCGCCTGGGGGCCAAGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Sodium-Dependent Bicarbonate Transporter; Sodium Bicarbonate Cotransporter; SBT Type Permease Sodium-Bicarbonate; Conserved Domain Protein; Permease-Like Protein; Domain Transmembrane Protein

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MDALELLRLNLLSPMVLAYFLGVAARLLKSDLAFPEALYTALSIYLLFAIGFKGGVELSHTPLAVVLLPALLTLALGLFR
PFPAYLLARRFLRVGREDAAALAAHYGSVSAVTFLAALTFVQAVGDAAPGFMPTLVALLEVPGIVVALLLAKRREGRLGE
ALHEVLTGKSVVLLLGGLLVGLLSGEEGMKKVEAFFVEPFQGALTLFLLDLGMVAASRLSVLRQVGLRLVLFGVGLALFH
GALGVYLGLLVGLGVGGAAVLGAMAASASYIAAPAAVRIALPEANPSLYLTASLAVTFPFNLVLGIPLYRALAVLWGG

Sequences:

>Translated_318_residues
MDALELLRLNLLSPMVLAYFLGVAARLLKSDLAFPEALYTALSIYLLFAIGFKGGVELSHTPLAVVLLPALLTLALGLFR
PFPAYLLARRFLRVGREDAAALAAHYGSVSAVTFLAALTFVQAVGDAAPGFMPTLVALLEVPGIVVALLLAKRREGRLGE
ALHEVLTGKSVVLLLGGLLVGLLSGEEGMKKVEAFFVEPFQGALTLFLLDLGMVAASRLSVLRQVGLRLVLFGVGLALFH
GALGVYLGLLVGLGVGGAAVLGAMAASASYIAAPAAVRIALPEANPSLYLTASLAVTFPFNLVLGIPLYRALAVLWGG
>Mature_318_residues
MDALELLRLNLLSPMVLAYFLGVAARLLKSDLAFPEALYTALSIYLLFAIGFKGGVELSHTPLAVVLLPALLTLALGLFR
PFPAYLLARRFLRVGREDAAALAAHYGSVSAVTFLAALTFVQAVGDAAPGFMPTLVALLEVPGIVVALLLAKRREGRLGE
ALHEVLTGKSVVLLLGGLLVGLLSGEEGMKKVEAFFVEPFQGALTLFLLDLGMVAASRLSVLRQVGLRLVLFGVGLALFH
GALGVYLGLLVGLGVGGAAVLGAMAASASYIAAPAAVRIALPEANPSLYLTASLAVTFPFNLVLGIPLYRALAVLWGG

Specific function: Unknown

COG id: COG3329

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33142; Mature: 33142

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALELLRLNLLSPMVLAYFLGVAARLLKSDLAFPEALYTALSIYLLFAIGFKGGVELSH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
TPLAVVLLPALLTLALGLFRPFPAYLLARRFLRVGREDAAALAAHYGSVSAVTFLAALTF
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHH
VQAVGDAAPGFMPTLVALLEVPGIVVALLLAKRREGRLGEALHEVLTGKSVVLLLGGLLV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHH
GLLSGEEGMKKVEAFFVEPFQGALTLFLLDLGMVAASRLSVLRQVGLRLVLFGVGLALFH
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALGVYLGLLVGLGVGGAAVLGAMAASASYIAAPAAVRIALPEANPSLYLTASLAVTFPF
HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCEEEEEECCCCCCEEEEEHHHHHHHH
NLVLGIPLYRALAVLWGG
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDALELLRLNLLSPMVLAYFLGVAARLLKSDLAFPEALYTALSIYLLFAIGFKGGVELSH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
TPLAVVLLPALLTLALGLFRPFPAYLLARRFLRVGREDAAALAAHYGSVSAVTFLAALTF
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHH
VQAVGDAAPGFMPTLVALLEVPGIVVALLLAKRREGRLGEALHEVLTGKSVVLLLGGLLV
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHH
GLLSGEEGMKKVEAFFVEPFQGALTLFLLDLGMVAASRLSVLRQVGLRLVLFGVGLALFH
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALGVYLGLLVGLGVGGAAVLGAMAASASYIAAPAAVRIALPEANPSLYLTASLAVTFPF
HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCEEEEEECCCCCCEEEEEHHHHHHHH
NLVLGIPLYRALAVLWGG
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA