| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980428
Identifier: 55980428
GI number: 55980428
Start: 430338
End: 431111
Strand: Direct
Name: 55980428
Synonym: TTHA0459
Alternate gene names: NA
Gene position: 430338-431111 (Clockwise)
Preceding gene: 55980427
Following gene: 55980429
Centisome position: 23.26
GC content: 66.15
Gene sequence:
>774_bases GTGGTCCCGGGGGCCAAGGAGAGGCCGGTCCAGGAGTTCCTCAACGCCCTCCTTTTCCGCCCCCTGGCGCACCTCGTCGT CCTCCTCCTCCTGCGTACGCCCGTGAGGCCCCACCACCTGGTCCTCTTCCACACGGGCCTGGTCCTTGGGGCCGCCTGGC TGCTCCTTAGGGGGGAGGACCTCGGGGCCGCCCTCCTCCTCCAGCTCAAAACCGTCTTGGACAACGCCGACGGGCAGCTC GCCCGCCTTAGGGGAGAGGTGACGGAGTTTGGGCGCTACCTGGACACGGGGATGGACTTCCTCGGGAACCTGGCCCTCTT CCTGGCCCTGGGCCTGCGCACCGGTTTCCTGGAGAAGGCCCTCCTCGCTTTTTTGGTTTTCACCCTGGTCCAGTCCTACG ACTTCAACCTGGAAAGGCTTTACCGCCTTTCCCGGGGGCTTCCCTTGCCCGAGGGGCCTCGGGACCCGGAAACCCCCTGG CTTCGCCTCTTCCGGGGGCTTTACGCCCTCCTCTTCGCCCCCCAGGACCGGGCCATCGTCGCCTTGGAGCGCTTTCTCCA GGGGCGGTTGCGGCTTGACCCCTCGCGTTTCTGGGACGAGGGGGCCTTGGCGGGGGTGGTGAACCTGGGCCTCACCACGC AGCTTTTCTTCCTGGGGGTTTTCCTCCTCTTCCACGAGCCTGGCGCCTACCTCACCTTTGTCCTCCTTCAGGCCGTGTAT CTTGGCCTTTGGTACCTATGGAGGATCGCCCGCAGTATCCCATCCCCACGGTAG
Upstream 100 bases:
>100_bases GCAAAGCGCCCCCGCTCCCGACGCCCTCGTCCTGGACACCGGGGGGATGACCCTGGACGAGGTGGTGGCCTGGGTCCTGG CCCACATCCGGAGGTAGGCC
Downstream 100 bases:
>100_bases GGGCCTTGGCGGAGAAGGAAGGCCTTGTGCTCTTGGTGCGCACGGCCAAGTGGCGGGGGCTTTGGGGGGTGCCCGGGGGG AAGGTGGCCTGGGGGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MVPGAKERPVQEFLNALLFRPLAHLVVLLLLRTPVRPHHLVLFHTGLVLGAAWLLLRGEDLGAALLLQLKTVLDNADGQL ARLRGEVTEFGRYLDTGMDFLGNLALFLALGLRTGFLEKALLAFLVFTLVQSYDFNLERLYRLSRGLPLPEGPRDPETPW LRLFRGLYALLFAPQDRAIVALERFLQGRLRLDPSRFWDEGALAGVVNLGLTTQLFFLGVFLLFHEPGAYLTFVLLQAVY LGLWYLWRIARSIPSPR
Sequences:
>Translated_257_residues MVPGAKERPVQEFLNALLFRPLAHLVVLLLLRTPVRPHHLVLFHTGLVLGAAWLLLRGEDLGAALLLQLKTVLDNADGQL ARLRGEVTEFGRYLDTGMDFLGNLALFLALGLRTGFLEKALLAFLVFTLVQSYDFNLERLYRLSRGLPLPEGPRDPETPW LRLFRGLYALLFAPQDRAIVALERFLQGRLRLDPSRFWDEGALAGVVNLGLTTQLFFLGVFLLFHEPGAYLTFVLLQAVY LGLWYLWRIARSIPSPR >Mature_257_residues MVPGAKERPVQEFLNALLFRPLAHLVVLLLLRTPVRPHHLVLFHTGLVLGAAWLLLRGEDLGAALLLQLKTVLDNADGQL ARLRGEVTEFGRYLDTGMDFLGNLALFLALGLRTGFLEKALLAFLVFTLVQSYDFNLERLYRLSRGLPLPEGPRDPETPW LRLFRGLYALLFAPQDRAIVALERFLQGRLRLDPSRFWDEGALAGVVNLGLTTQLFFLGVFLLFHEPGAYLTFVLLQAVY LGLWYLWRIARSIPSPR
Specific function: Unknown
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29086; Mature: 29086
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPGAKERPVQEFLNALLFRPLAHLVVLLLLRTPVRPHHLVLFHTGLVLGAAWLLLRGED CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCC LGAALLLQLKTVLDNADGQLARLRGEVTEFGRYLDTGMDFLGNLALFLALGLRTGFLEKA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAFLVFTLVQSYDFNLERLYRLSRGLPLPEGPRDPETPWLRLFRGLYALLFAPQDRAIV HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH ALERFLQGRLRLDPSRFWDEGALAGVVNLGLTTQLFFLGVFLLFHEPGAYLTFVLLQAVY HHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LGLWYLWRIARSIPSPR HHHHHHHHHHHHCCCCC >Mature Secondary Structure MVPGAKERPVQEFLNALLFRPLAHLVVLLLLRTPVRPHHLVLFHTGLVLGAAWLLLRGED CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCC LGAALLLQLKTVLDNADGQLARLRGEVTEFGRYLDTGMDFLGNLALFLALGLRTGFLEKA HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAFLVFTLVQSYDFNLERLYRLSRGLPLPEGPRDPETPWLRLFRGLYALLFAPQDRAIV HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH ALERFLQGRLRLDPSRFWDEGALAGVVNLGLTTQLFFLGVFLLFHEPGAYLTFVLLQAVY HHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LGLWYLWRIARSIPSPR HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA