| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980409
Identifier: 55980409
GI number: 55980409
Start: 413503
End: 414846
Strand: Direct
Name: 55980409
Synonym: TTHA0440
Alternate gene names: NA
Gene position: 413503-414846 (Clockwise)
Preceding gene: 55980408
Following gene: 55980416
Centisome position: 22.35
GC content: 74.63
Gene sequence:
>1344_bases ATGACCTTCTGGGCCCTCCTCTTCCTCGTCCTCTTCCTTTCGGCCTTGGTGGCCTACCTGGGGGACAAGGTGGCCAAGTG GGCGGGGAAGCGGCACTACCGCCTCTTCGGCCTGAGGCCCCGCCAGACGGCCACCCTGGTCGCCGTCTTCACCGGGGTGG GCATCGCCCTCTTGAGCTACCTGGGCTTCCTCCTGGTCTTCCGGGACGCCCGGGAGGTGATCCTCCAGGCGGAGGCCATC CGGGCCGAGCGGGACCGGCTCAAGGAGCAAAGGGCGGCCCTGGAGGCGGAGGCCGCCCGGGCCCTCGCCGAGGTCAACGC CCTGCGCGGGGAGCGGGGCGCCCTCCTTCAGGCCCTGGAGCGGGTGGAGGGGCTGCGGGAGGCGGCCTCCCGGGAGCTTG CCGCCCTCCGGGAGGAGGTGGCCCGCCTCGAGGCCCGGGGGAAGGCCTTGGAGGAGGCCTTGCGCGCCCGCGAGGCGGAG GTGAGGGCCAAGGAGGAGGCCCTCCGGGCCCTGGAGGCCAGGCTGCGGGAGGCCGAGGCGGAGCTGGCGCAGGCCCGAAA GGAGCGGGAAGCCCTCCTGGGGGAGAGGGAGCGGCTCGAGGCCGACCTCGTGGCCCTCCAGGGACGGGTGTTGGACTTAA GGCGCTCCCGGGAGGTTCTGGAGGAGGAGGCCTCCCGGCTCCGGGAGGCCCTGGCCCGGGTACGCCAGGAGCTCGCCGAG GAGGAGAGGCGGGTCCAGGGCCTCCTCGTCCAGGCCCGGGTGCTGGAGGGGCAGAAGGGCCAGCTCGCGGAAGGCCTCGC CCGCCTGAGCCAGGGGCTCTACCTGGGGGAGGTGCGCCTGGGCCCGGAGGAGGGCCCCGTGGCGCTGGAAGAGGCGGCCC GGAGGCGGGCCCTCCTCCTGGGCTTCAAGGGCGTGCGGCTTCTCGGCGGGGCCAAGGGCCCGGGGCTTGCTGTTCTGGAA GGGGCAGGGTACGAGGACGGCGTCCTCCTCGTCCGGGCCCGCTTTTACCCGGAAAAGCGCCTGTGGCCCGCGGGGGAGGT TCTCGCCAGCGCCACCTTCCTCAACACGGGGGAGCCCCGGGCCCGGGCCGTCCTCCTGGAGGTGGGGGAACGGGTCCGGA AGCGCCTTCTGGAGGAGGGCGTGCCCCCGGAGTACGCCCGCTTCCCCACGGAGACGGACCTGGCCCAGGGCCTCCTCCTC CTCCGGGGGCGGTCCGGGGTGGTCCGGGTGGGGGTGGTGGCTTTGCGGGAGGTGTGGACGGTGGAGCCGCCCCTCCTCGC CTTCCGCCTCCTCGGGGGGCCTCCGGGCCCGGAGGTACCGGTCCCGACCCGCGAGGTCCGGTAG
Upstream 100 bases:
>100_bases TGTACGACGGCCAGGTCCTCTTCCACGGGGACCCGGAGACCTTCGCCAAGGACCAGGGGGTGAGGCGCCACTACCTGGGC GAGGACTACGAGCTCTAGCC
Downstream 100 bases:
>100_bases GACCGCCACCTCCTTCCAGCCCTTTTCCCGGAGCTCCCGGGCGAGGAGGTGGACGTTTTCCGGGGCGAGTTCCAGGAGGA GGTACCCCCCGGGCTTCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MTFWALLFLVLFLSALVAYLGDKVAKWAGKRHYRLFGLRPRQTATLVAVFTGVGIALLSYLGFLLVFRDAREVILQAEAI RAERDRLKEQRAALEAEAARALAEVNALRGERGALLQALERVEGLREAASRELAALREEVARLEARGKALEEALRAREAE VRAKEEALRALEARLREAEAELAQARKEREALLGERERLEADLVALQGRVLDLRRSREVLEEEASRLREALARVRQELAE EERRVQGLLVQARVLEGQKGQLAEGLARLSQGLYLGEVRLGPEEGPVALEEAARRRALLLGFKGVRLLGGAKGPGLAVLE GAGYEDGVLLVRARFYPEKRLWPAGEVLASATFLNTGEPRARAVLLEVGERVRKRLLEEGVPPEYARFPTETDLAQGLLL LRGRSGVVRVGVVALREVWTVEPPLLAFRLLGGPPGPEVPVPTREVR
Sequences:
>Translated_447_residues MTFWALLFLVLFLSALVAYLGDKVAKWAGKRHYRLFGLRPRQTATLVAVFTGVGIALLSYLGFLLVFRDAREVILQAEAI RAERDRLKEQRAALEAEAARALAEVNALRGERGALLQALERVEGLREAASRELAALREEVARLEARGKALEEALRAREAE VRAKEEALRALEARLREAEAELAQARKEREALLGERERLEADLVALQGRVLDLRRSREVLEEEASRLREALARVRQELAE EERRVQGLLVQARVLEGQKGQLAEGLARLSQGLYLGEVRLGPEEGPVALEEAARRRALLLGFKGVRLLGGAKGPGLAVLE GAGYEDGVLLVRARFYPEKRLWPAGEVLASATFLNTGEPRARAVLLEVGERVRKRLLEEGVPPEYARFPTETDLAQGLLL LRGRSGVVRVGVVALREVWTVEPPLLAFRLLGGPPGPEVPVPTREVR >Mature_446_residues TFWALLFLVLFLSALVAYLGDKVAKWAGKRHYRLFGLRPRQTATLVAVFTGVGIALLSYLGFLLVFRDAREVILQAEAIR AERDRLKEQRAALEAEAARALAEVNALRGERGALLQALERVEGLREAASRELAALREEVARLEARGKALEEALRAREAEV RAKEEALRALEARLREAEAELAQARKEREALLGERERLEADLVALQGRVLDLRRSREVLEEEASRLREALARVRQELAEE ERRVQGLLVQARVLEGQKGQLAEGLARLSQGLYLGEVRLGPEEGPVALEEAARRRALLLGFKGVRLLGGAKGPGLAVLEG AGYEDGVLLVRARFYPEKRLWPAGEVLASATFLNTGEPRARAVLLEVGERVRKRLLEEGVPPEYARFPTETDLAQGLLLL RGRSGVVRVGVVALREVWTVEPPLLAFRLLGGPPGPEVPVPTREVR
Specific function: Unknown
COG id: COG4372
COG function: function code S; Uncharacterized protein conserved in bacteria with the myosin-like domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49498; Mature: 49367
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFWALLFLVLFLSALVAYLGDKVAKWAGKRHYRLFGLRPRQTATLVAVFTGVGIALLSY CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH LGFLLVFRDAREVILQAEAIRAERDRLKEQRAALEAEAARALAEVNALRGERGALLQALE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RVEGLREAASRELAALREEVARLEARGKALEEALRAREAEVRAKEEALRALEARLREAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELAQARKEREALLGERERLEADLVALQGRVLDLRRSREVLEEEASRLREALARVRQELAE HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EERRVQGLLVQARVLEGQKGQLAEGLARLSQGLYLGEVRLGPEEGPVALEEAARRRALLL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHH GFKGVRLLGGAKGPGLAVLEGAGYEDGVLLVRARFYPEKRLWPAGEVLASATFLNTGEPR CCCCHHHCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHH ARAVLLEVGERVRKRLLEEGVPPEYARFPTETDLAQGLLLLRGRSGVVRVGVVALREVWT HHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC VEPPLLAFRLLGGPPGPEVPVPTREVR CCCHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TFWALLFLVLFLSALVAYLGDKVAKWAGKRHYRLFGLRPRQTATLVAVFTGVGIALLSY CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH LGFLLVFRDAREVILQAEAIRAERDRLKEQRAALEAEAARALAEVNALRGERGALLQALE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RVEGLREAASRELAALREEVARLEARGKALEEALRAREAEVRAKEEALRALEARLREAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELAQARKEREALLGERERLEADLVALQGRVLDLRRSREVLEEEASRLREALARVRQELAE HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EERRVQGLLVQARVLEGQKGQLAEGLARLSQGLYLGEVRLGPEEGPVALEEAARRRALLL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHH GFKGVRLLGGAKGPGLAVLEGAGYEDGVLLVRARFYPEKRLWPAGEVLASATFLNTGEPR CCCCHHHCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHH ARAVLLEVGERVRKRLLEEGVPPEYARFPTETDLAQGLLLLRGRSGVVRVGVVALREVWT HHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC VEPPLLAFRLLGGPPGPEVPVPTREVR CCCHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA