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The map label for this gene is 55980396

Identifier: 55980396

GI number: 55980396

Start: 403425

End: 403805

Strand: Reverse

Name: 55980396

Synonym: TTHA0427

Alternate gene names: NA

Gene position: 403805-403425 (Counterclockwise)

Preceding gene: 55980400

Following gene: 55980395

Centisome position: 21.83

GC content: 67.45

Gene sequence:

>381_bases
ATGAACCGGGCCCGGGACTGGCTCCTCCAGGCGGAGAAGGACCTGGAGACGGCCGAGATCGCCCGGAACGCCGGGAGGCA
CGAGTGGGCCTGCTTCGCCACCCAGCAAGCGGCCGAGAAGGCCGTCAAGGCCCTCCACCTCCACCTGGGCCAGGAGGCCT
GGGGGCACCTCGTGGCCCGGCTCCTAAAGGAGCTTCCCCTTCAGGTGCCCCAGGAGCTGGTGGAGAAGGCCCGCTATCTG
GATGGGCTCTATATCCCTACCCGCCACCCCGACGCCTTCCCCGAGGGGCCTTTGGCGGAGCACTACGGACCCTTGCAGAG
CGAGGATGCCATAGGCTATGCCCGTGAGATCCTTGGGTTCGTCCGTGCTCAGATGGCCTAG

Upstream 100 bases:

>100_bases
CTTCACCGGGGCCTCCTCCTTCTTGTAGGGGTAAGGGCTAAGGCCCCGGAGGTGCGCCTTGAAGGCCCGCATGCCCCGAG
TATAGCGGTAAACTCAGGGC

Downstream 100 bases:

>100_bases
CCGGGAAGAAGTGGAGGAGGCCCTGAAGGCCTGGCTTTCCCGCCACCCCATCCCGGGGCTTTTGGCCGCGGGCTACTTCG
GCTCCTACGCCCGGGGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: HEPN Domain Protein; Hepn Domain Protein; Hepn Domain-Containing Protein; Hepn Domain; HEPN Domain; Amidophosphoribosyltransferase

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MNRARDWLLQAEKDLETAEIARNAGRHEWACFATQQAAEKAVKALHLHLGQEAWGHLVARLLKELPLQVPQELVEKARYL
DGLYIPTRHPDAFPEGPLAEHYGPLQSEDAIGYAREILGFVRAQMA

Sequences:

>Translated_126_residues
MNRARDWLLQAEKDLETAEIARNAGRHEWACFATQQAAEKAVKALHLHLGQEAWGHLVARLLKELPLQVPQELVEKARYL
DGLYIPTRHPDAFPEGPLAEHYGPLQSEDAIGYAREILGFVRAQMA
>Mature_126_residues
MNRARDWLLQAEKDLETAEIARNAGRHEWACFATQQAAEKAVKALHLHLGQEAWGHLVARLLKELPLQVPQELVEKARYL
DGLYIPTRHPDAFPEGPLAEHYGPLQSEDAIGYAREILGFVRAQMA

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14233; Mature: 14233

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRARDWLLQAEKDLETAEIARNAGRHEWACFATQQAAEKAVKALHLHLGQEAWGHLVAR
CCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LLKELPLQVPQELVEKARYLDGLYIPTRHPDAFPEGPLAEHYGPLQSEDAIGYAREILGF
HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHH
VRAQMA
HHHHCC
>Mature Secondary Structure
MNRARDWLLQAEKDLETAEIARNAGRHEWACFATQQAAEKAVKALHLHLGQEAWGHLVAR
CCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LLKELPLQVPQELVEKARYLDGLYIPTRHPDAFPEGPLAEHYGPLQSEDAIGYAREILGF
HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHH
VRAQMA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA