| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980395
Identifier: 55980395
GI number: 55980395
Start: 403109
End: 403468
Strand: Reverse
Name: 55980395
Synonym: TTHA0426
Alternate gene names: NA
Gene position: 403468-403109 (Counterclockwise)
Preceding gene: 55980396
Following gene: 55980392
Centisome position: 21.81
GC content: 70.28
Gene sequence:
>360_bases ATGCCCGTGAGATCCTTGGGTTCGTCCGTGCTCAGATGGCCTAGCCGGGAAGAAGTGGAGGAGGCCCTGAAGGCCTGGCT TTCCCGCCACCCCATCCCGGGGCTTTTGGCCGCGGGCTACTTCGGCTCCTACGCCCGGGGGGAGGCAGGGGTGGGGAGCG ACCTGGACCTCCTCCTCCTGGTGGCGCACTCCCCCCTCCCCCCCTGGAAGCGCCCCCTGGGGCTTTCCCTAGAGGAGCTT CCCGTGCCCGCGGAGGCCCTGGTCTACACCCTGGAGGAGTGGAAAGGCCTGCCCCAAAGAAGCCCCCGCCTGGCCCGGGT CCTCCGGGAGGAAACCCGCTGGCTCCTCCCCCCTCCCTAG
Upstream 100 bases:
>100_bases CTGGATGGGCTCTATATCCCTACCCGCCACCCCGACGCCTTCCCCGAGGGGCCTTTGGCGGAGCACTACGGACCCTTGCA GAGCGAGGATGCCATAGGCT
Downstream 100 bases:
>100_bases CGCCAGAGGACCACCCGCTCCAGGGGCAGGCGGTGGGAGGGGTAGCCCTCCTCCGCCGGGTAGCCCAAGGCCACCAGGGC GGGGATGGCGGCGTGGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleotidyltransferase Domain; Nucleotidyltransferase Domain-Containing Protein
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MPVRSLGSSVLRWPSREEVEEALKAWLSRHPIPGLLAAGYFGSYARGEAGVGSDLDLLLLVAHSPLPPWKRPLGLSLEEL PVPAEALVYTLEEWKGLPQRSPRLARVLREETRWLLPPP
Sequences:
>Translated_119_residues MPVRSLGSSVLRWPSREEVEEALKAWLSRHPIPGLLAAGYFGSYARGEAGVGSDLDLLLLVAHSPLPPWKRPLGLSLEEL PVPAEALVYTLEEWKGLPQRSPRLARVLREETRWLLPPP >Mature_118_residues PVRSLGSSVLRWPSREEVEEALKAWLSRHPIPGLLAAGYFGSYARGEAGVGSDLDLLLLVAHSPLPPWKRPLGLSLEELP VPAEALVYTLEEWKGLPQRSPRLARVLREETRWLLPPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13265; Mature: 13133
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRSLGSSVLRWPSREEVEEALKAWLSRHPIPGLLAAGYFGSYARGEAGVGSDLDLLLL CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHH VAHSPLPPWKRPLGLSLEELPVPAEALVYTLEEWKGLPQRSPRLARVLREETRWLLPPP HHCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PVRSLGSSVLRWPSREEVEEALKAWLSRHPIPGLLAAGYFGSYARGEAGVGSDLDLLLL CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHH VAHSPLPPWKRPLGLSLEELPVPAEALVYTLEEWKGLPQRSPRLARVLREETRWLLPPP HHCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA