| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980374
Identifier: 55980374
GI number: 55980374
Start: 384586
End: 385617
Strand: Reverse
Name: 55980374
Synonym: TTHA0405
Alternate gene names: NA
Gene position: 385617-384586 (Counterclockwise)
Preceding gene: 55980375
Following gene: 55980372
Centisome position: 20.85
GC content: 71.61
Gene sequence:
>1032_bases GTGATCCGGGCCACGCTTTCCGAGCTGGACCTGGGGGAGCTCCTTAGGGCCCTGGAGGCGGCGCGGAAGAGCGCCGTGGT GAGCTTCCGGGGCCGGATCTACGGGCGCGTCCACCTCCTCGGGGGGCGGATCCTCTACGCCCGCACCGAGCCCGGCCCCC ACCTCGGGGAGTACCTGGTCCGCCTGGGCCACCTCACCCTGGAGGAGGTGCAGGAGCTGGTGGAGCGCCAGGACCGGGAG AACCCCGGCACCCCCTTGGGGGCTTTGGCCCTGGAGCTCGGCCTCATCGGGGAGGAGGAGCTTAGGGAGGCCCTCACCGC CCAGGTCCTCGAGGCCTTGGCCACCCTCCTCGGGGAGAAGGAGGGGGAGGTGGTGGCGGAGCCCATGGTGGAGGGAAGCC AGGTGGCCCTCCCCCTCACCTTCGGCACCGGCTGGGCCCTCATGGAGGCGGCCCGCAAGCTGGACGAGTGGCGGCGGGGG CAGGTGGACCCGGACGAGGTCCTCCACCTCGTGGAAGACCCCACCCGGCACCCCCTTCCCCCGGAGGCCTGGAGCGTTCT GGAGCACCTGGACGGGGTGCGGCGGGCAAGGAGCATCGCCCTCCTCTCGGGGCTTCCCGAGGAGGAGGTCTACCACCTCC TCCACGAGATGAAGGCGAGGGGCCTCCTCCGCCCCTCCACCCTCCTCCTCGAGGACCCCTTGGTGGCCGTCCTGGCGGAA AGCGGGGTGGTGCGGAGGCTCCTTCTGTACCTCCTCGAGGCCCACCGCTTCCGCGTCCTTCTGGCCCGGGACGTGGAGGG GCTCTTGCGCCTCCTCAAGTCCAGGCCCAAGGGGGTGATCCTCCAAGGGGAGAAGGCGGTGGAGGCGGCCCGCAAGGTGC GGGCCACCCCGGAAGGGCGGCTCGCCTCCCTCTACCTGGTGAGCGAAACCCCGCCGGGCCTCCTCCTCAGGCCCCTGAGG CTCCTCCACCTGCCCAAACCCTTAAGGAGCCAGGAGGTCCTAAAGGCCCTGGAGCCCCTGCGGAGGGGCTAA
Upstream 100 bases:
>100_bases GCCAGGGCCTTTTGAAGCGCACTCCCCGGGGCCGGGTGGCCACGGAACTGGCCTACCGCCACCTGGGCTACCCGCCCCCG GTGGGCCCCCTCTTGGAGCC
Downstream 100 bases:
>100_bases CCCCGCCCCCTGGGAAGCGCTCAGTTCAGGCGCTTCCCCTCCCGCAAGAGGGCCTGGGCGCGCTCCACGTAGGCGGTGAG GGCGGCGTGCCACTCGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MIRATLSELDLGELLRALEAARKSAVVSFRGRIYGRVHLLGGRILYARTEPGPHLGEYLVRLGHLTLEEVQELVERQDRE NPGTPLGALALELGLIGEEELREALTAQVLEALATLLGEKEGEVVAEPMVEGSQVALPLTFGTGWALMEAARKLDEWRRG QVDPDEVLHLVEDPTRHPLPPEAWSVLEHLDGVRRARSIALLSGLPEEEVYHLLHEMKARGLLRPSTLLLEDPLVAVLAE SGVVRRLLLYLLEAHRFRVLLARDVEGLLRLLKSRPKGVILQGEKAVEAARKVRATPEGRLASLYLVSETPPGLLLRPLR LLHLPKPLRSQEVLKALEPLRRG
Sequences:
>Translated_343_residues MIRATLSELDLGELLRALEAARKSAVVSFRGRIYGRVHLLGGRILYARTEPGPHLGEYLVRLGHLTLEEVQELVERQDRE NPGTPLGALALELGLIGEEELREALTAQVLEALATLLGEKEGEVVAEPMVEGSQVALPLTFGTGWALMEAARKLDEWRRG QVDPDEVLHLVEDPTRHPLPPEAWSVLEHLDGVRRARSIALLSGLPEEEVYHLLHEMKARGLLRPSTLLLEDPLVAVLAE SGVVRRLLLYLLEAHRFRVLLARDVEGLLRLLKSRPKGVILQGEKAVEAARKVRATPEGRLASLYLVSETPPGLLLRPLR LLHLPKPLRSQEVLKALEPLRRG >Mature_343_residues MIRATLSELDLGELLRALEAARKSAVVSFRGRIYGRVHLLGGRILYARTEPGPHLGEYLVRLGHLTLEEVQELVERQDRE NPGTPLGALALELGLIGEEELREALTAQVLEALATLLGEKEGEVVAEPMVEGSQVALPLTFGTGWALMEAARKLDEWRRG QVDPDEVLHLVEDPTRHPLPPEAWSVLEHLDGVRRARSIALLSGLPEEEVYHLLHEMKARGLLRPSTLLLEDPLVAVLAE SGVVRRLLLYLLEAHRFRVLLARDVEGLLRLLKSRPKGVILQGEKAVEAARKVRATPEGRLASLYLVSETPPGLLLRPLR LLHLPKPLRSQEVLKALEPLRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38137; Mature: 38137
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRATLSELDLGELLRALEAARKSAVVSFRGRIYGRVHLLGGRILYARTEPGPHLGEYLV CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEEEECCCCCCHHHHHH RLGHLTLEEVQELVERQDRENPGTPLGALALELGLIGEEELREALTAQVLEALATLLGEK HHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC EGEVVAEPMVEGSQVALPLTFGTGWALMEAARKLDEWRRGQVDPDEVLHLVEDPTRHPLP CCCCHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC PEAWSVLEHLDGVRRARSIALLSGLPEEEVYHLLHEMKARGLLRPSTLLLEDPLVAVLAE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHC SGVVRRLLLYLLEAHRFRVLLARDVEGLLRLLKSRPKGVILQGEKAVEAARKVRATPEGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCC LASLYLVSETPPGLLLRPLRLLHLPKPLRSQEVLKALEPLRRG EEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIRATLSELDLGELLRALEAARKSAVVSFRGRIYGRVHLLGGRILYARTEPGPHLGEYLV CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEEEECCCCCCHHHHHH RLGHLTLEEVQELVERQDRENPGTPLGALALELGLIGEEELREALTAQVLEALATLLGEK HHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC EGEVVAEPMVEGSQVALPLTFGTGWALMEAARKLDEWRRGQVDPDEVLHLVEDPTRHPLP CCCCHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC PEAWSVLEHLDGVRRARSIALLSGLPEEEVYHLLHEMKARGLLRPSTLLLEDPLVAVLAE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHC SGVVRRLLLYLLEAHRFRVLLARDVEGLLRLLKSRPKGVILQGEKAVEAARKVRATPEGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCC LASLYLVSETPPGLLLRPLRLLHLPKPLRSQEVLKALEPLRRG EEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA