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The map label for this gene is yqjC [H]

Identifier: 55980361

GI number: 55980361

Start: 371883

End: 372275

Strand: Direct

Name: yqjC [H]

Synonym: TTHA0392

Alternate gene names: 55980361

Gene position: 371883-372275 (Clockwise)

Preceding gene: 55980360

Following gene: 55980362

Centisome position: 20.1

GC content: 70.23

Gene sequence:

>393_bases
ATGCGGCTCCACCACGTGGGCATCGCCGTGGAGGACCTGGAGGAGGCCAAGGCCCGCTACCAAAGCCTGGGCTTCCGGGT
GGTGGCGGAAGGGGAGGTGGCCCACCAGGGGGTGCGGGTGGCCCTGCTTAGGGGGGAAGGGGAGGCCCTCCTCGAGCTCC
TCTCCCCCCTTGGCCCCGAGACCCCGGTGGGGCGGTTCCTGGCCAAAAGGGGCCCCGGCCTCCACCACCTGGCCTTCGCC
ACTTCCCGGATAGAGGAGGACCTGGCCCGGCTCAAAGCGGAAGGGGCGAAGCTTATTGACGAAGCCCCGAGGCCCGGCTT
CGGCGGCCACCGGGTGGCCTTCCTCCACCCAAGCTTTGGCCTGGGGGTCCTTTGGGAACTGGTGGAGGCGTAG

Upstream 100 bases:

>100_bases
TTCCACGGGTACAAGGCCCTCGAGGGCACCTTCCTGGGGGGGTGCCTCTTCAGCGGGCTCCAGGCGGCCAAGGGGGTGCT
GGAAGGGCTAGAATAGCCCC

Downstream 100 bases:

>100_bases
TGCGCCCCTTCTACGCCCTCCTCGCCCTCCTGTGGATGGGGGTGCTCTGGTGGCTTTCCGAAAGGCCTTTCCCGGGCGCC
GGGCTTCCCCATCCTTGGGA

Product: methylmalonyl-CoA epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MRLHHVGIAVEDLEEAKARYQSLGFRVVAEGEVAHQGVRVALLRGEGEALLELLSPLGPETPVGRFLAKRGPGLHHLAFA
TSRIEEDLARLKAEGAKLIDEAPRPGFGGHRVAFLHPSFGLGVLWELVEA

Sequences:

>Translated_130_residues
MRLHHVGIAVEDLEEAKARYQSLGFRVVAEGEVAHQGVRVALLRGEGEALLELLSPLGPETPVGRFLAKRGPGLHHLAFA
TSRIEEDLARLKAEGAKLIDEAPRPGFGGHRVAFLHPSFGLGVLWELVEA
>Mature_130_residues
MRLHHVGIAVEDLEEAKARYQSLGFRVVAEGEVAHQGVRVALLRGEGEALLELLSPLGPETPVGRFLAKRGPGLHHLAFA
TSRIEEDLARLKAEGAKLIDEAPRPGFGGHRVAFLHPSFGLGVLWELVEA

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=131, Percent_Identity=38.1679389312977, Blast_Score=73, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17506387, Length=127, Percent_Identity=33.8582677165354, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 14084; Mature: 14084

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLHHVGIAVEDLEEAKARYQSLGFRVVAEGEVAHQGVRVALLRGEGEALLELLSPLGPE
CCEEECCCHHHHHHHHHHHHHHCCCEEEECCHHHHCCEEEEEEECCCHHHHHHHHCCCCC
TPVGRFLAKRGPGLHHLAFATSRIEEDLARLKAEGAKLIDEAPRPGFGGHRVAFLHPSFG
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCC
LGVLWELVEA
HHHHHHHHCC
>Mature Secondary Structure
MRLHHVGIAVEDLEEAKARYQSLGFRVVAEGEVAHQGVRVALLRGEGEALLELLSPLGPE
CCEEECCCHHHHHHHHHHHHHHCCCEEEECCHHHHCCEEEEEEECCCHHHHHHHHCCCCC
TPVGRFLAKRGPGLHHLAFATSRIEEDLARLKAEGAKLIDEAPRPGFGGHRVAFLHPSFG
CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCC
LGVLWELVEA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]