Click here to switch to the map view.

The map label for this gene is 55980359

Identifier: 55980359

GI number: 55980359

Start: 370798

End: 371238

Strand: Direct

Name: 55980359

Synonym: TTHA0390

Alternate gene names: NA

Gene position: 370798-371238 (Clockwise)

Preceding gene: 55980358

Following gene: 55980360

Centisome position: 20.05

GC content: 71.43

Gene sequence:

>441_bases
ATGGACGCCGACCTCGTGGTGGTGGGTGGGGGGCTCGCCGGCCTCGTGGTGGCCACGGAGGTGGCCCAAAGGGGCAAGCG
GGTCCTCCTTTTGGAGCAGGAGCCTTACCTCGGCGGGCAGGCCTTCTGGTCCTTCGGGGGGCTTTTCCTGGTGGACTCCC
CCGAGCAGAGGCGCCTGGGGATCCGGGACTCGGTGGAGCTCGCCTTCCAGGACTGGATGGGCGCGGCGGGCTACGACCGG
GAGGAGGACGCCTGGGGAAGGCGGTTCGCGGAGGCCTACCTGGAGTTCGCCGCGGGGGAGAAACGGGCCTGGCTCGCCTC
CTTGGGGGTGCGCTTCTTCCCGGTGGTGGGTTGGGCGGAGCGGGGCGGGGGCCTGGCCACGGGCCACGGGAACTCCGTAC
GCCTTGGAGACCCTGCGGTACCTGCGGAGCACCGGCTTTGA

Upstream 100 bases:

>100_bases
GGAGGAGGCCCCTAAAGAGGAGGTGGGGAAGGAGCTTTTGCTCTTCCGGGGCAAGCCCCCCTGGTACGACCTTTGAACCG
GGTATAATGTCCCCAACCTT

Downstream 100 bases:

>100_bases
CTGGAGCTGGTTCATCCTGGACCTCCCCACCCTCAAGAAGGAGTTCGCCCTCTCGGGCTCGGAGCAGAACCCGGACCTCA
CGGGGAAAAGCTGGCTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MDADLVVVGGGLAGLVVATEVAQRGKRVLLLEQEPYLGGQAFWSFGGLFLVDSPEQRRLGIRDSVELAFQDWMGAAGYDR
EEDAWGRRFAEAYLEFAAGEKRAWLASLGVRFFPVVGWAERGGGLATGHGNSVRLGDPAVPAEHRL

Sequences:

>Translated_146_residues
MDADLVVVGGGLAGLVVATEVAQRGKRVLLLEQEPYLGGQAFWSFGGLFLVDSPEQRRLGIRDSVELAFQDWMGAAGYDR
EEDAWGRRFAEAYLEFAAGEKRAWLASLGVRFFPVVGWAERGGGLATGHGNSVRLGDPAVPAEHRL
>Mature_146_residues
MDADLVVVGGGLAGLVVATEVAQRGKRVLLLEQEPYLGGQAFWSFGGLFLVDSPEQRRLGIRDSVELAFQDWMGAAGYDR
EEDAWGRRFAEAYLEFAAGEKRAWLASLGVRFFPVVGWAERGGGLATGHGNSVRLGDPAVPAEHRL

Specific function: Able to catalyze the elimination of the C-1 and C-2 hydrogen atoms of the A-ring from the polycyclic ring structure of 3-ketosteroids, but the ketosteroid dehydrogenase activity is low compared to KsdD in the cholesterol degradation process. The low activ

COG id: COG3573

COG function: function code R; Predicted oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent oxidoreductase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15818; Mature: 15818

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDADLVVVGGGLAGLVVATEVAQRGKRVLLLEQEPYLGGQAFWSFGGLFLVDSPEQRRLG
CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEEEEECCHHHCCC
IRDSVELAFQDWMGAAGYDREEDAWGRRFAEAYLEFAAGEKRAWLASLGVRFFPVVGWAE
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHEEECCCC
RGGGLATGHGNSVRLGDPAVPAEHRL
CCCEEEECCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MDADLVVVGGGLAGLVVATEVAQRGKRVLLLEQEPYLGGQAFWSFGGLFLVDSPEQRRLG
CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEEEEECCHHHCCC
IRDSVELAFQDWMGAAGYDREEDAWGRRFAEAYLEFAAGEKRAWLASLGVRFFPVVGWAE
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHEEECCCC
RGGGLATGHGNSVRLGDPAVPAEHRL
CCCEEEECCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA