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The map label for this gene is ydbK [C]

Identifier: 55980358

GI number: 55980358

Start: 369826

End: 370773

Strand: Direct

Name: ydbK [C]

Synonym: TTHA0389

Alternate gene names: 55980358

Gene position: 369826-370773 (Clockwise)

Preceding gene: 55980357

Following gene: 55980359

Centisome position: 19.99

GC content: 71.2

Gene sequence:

>948_bases
ATGGGCTTTCTGGACGGTCTCCTCAACGCCTTCCTCAAGGCCACGGACCCGAGGCCCCGTTACACCGAGGCCCGCTGCCT
CCTCTACAAGAACAGCGTGGGGGGGTGCGACAAGTGCTATGGGGTCTGCCCCAAGGGGGCGGTGCGCCTCGAGGGGTGGC
GGGTGGAGCTGGACGAGGTCTTGTGCACGGGGTGCGGCCTCTGCACCGGGGTCTGCCCCGGGATCGCCCTGGAGTACCCC
CTCGGGGCCATCCAGGAGGCCCTGATCCGGGGAAAGGGGAAGCTTAGGTGCTCCAAGGCCGAGGGGAAGGGCGAGGAGGT
GTTGTGCCTGGGCCGCCTCACCCCGGGGCTATTGGCCGAGGCGGGAAGCCGCTTCGGCAAGGTGGTCCTCGCCCGGGGGG
ACTGCGAAGCCTGCCGGATCGGGGGGCCGGAGGTCCCTGAGCGCCTCGCGCGCATGGCCGAGGAGGCGAGGCGCTACTTC
CCCGTGGAGGTGGAGGTGGTGGAGGGGGAGCTTCCCGGGGAAAGGGTGGGCAGGCGGGAGCTCTTCCAGGCCCTTCTGGG
AAGCGCCAAGCGCACCGCCGCCGACCTCGTCCCCGAGCTTCCCCTGCCCGCTTTGGAGGAGGAGAGGGAAGGGGAGCTTC
CCGCCGAGCTCCGCCTTAGGCGCCTCGCCGCAAGCCGCGCCCCGGAGGTCCGCTGGCCCCGGATCCGGGTGGAGGAGGGG
TGCACCCTCTGCCCCGTCTGCACCAACGTCTGCCCCACGGAGGCGGTGCGGCGGGTGCGGGAGGGGGAGGAGTACGTCCT
CTACCTCCAGGTGGCGGCCTGCACGGGGTGCGGGGCCTGCGTGGAGAGCTGCCCGCCCCAGGTGATCCGGCTGGAGGAGG
CCCCTAAAGAGGAGGTGGGGAAGGAGCTTTTGCTCTTCCGGGGCAAGCCCCCCTGGTACGACCTTTGA

Upstream 100 bases:

>100_bases
ACCCCAAGGTGGCCCTCTCCGACAACCAGCAGCAGATGGACTTCGCCCAGTTTGACCGCTTCCTGGAGGCCATTAGGGAC
CTCCTCCAGGCCCCTTAGCC

Downstream 100 bases:

>100_bases
ACCGGGTATAATGTCCCCAACCTTATGGACGCCGACCTCGTGGTGGTGGGTGGGGGGCTCGCCGGCCTCGTGGTGGCCAC
GGAGGTGGCCCAAAGGGGCA

Product: polyferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MGFLDGLLNAFLKATDPRPRYTEARCLLYKNSVGGCDKCYGVCPKGAVRLEGWRVELDEVLCTGCGLCTGVCPGIALEYP
LGAIQEALIRGKGKLRCSKAEGKGEEVLCLGRLTPGLLAEAGSRFGKVVLARGDCEACRIGGPEVPERLARMAEEARRYF
PVEVEVVEGELPGERVGRRELFQALLGSAKRTAADLVPELPLPALEEEREGELPAELRLRRLAASRAPEVRWPRIRVEEG
CTLCPVCTNVCPTEAVRRVREGEEYVLYLQVAACTGCGACVESCPPQVIRLEEAPKEEVGKELLLFRGKPPWYDL

Sequences:

>Translated_315_residues
MGFLDGLLNAFLKATDPRPRYTEARCLLYKNSVGGCDKCYGVCPKGAVRLEGWRVELDEVLCTGCGLCTGVCPGIALEYP
LGAIQEALIRGKGKLRCSKAEGKGEEVLCLGRLTPGLLAEAGSRFGKVVLARGDCEACRIGGPEVPERLARMAEEARRYF
PVEVEVVEGELPGERVGRRELFQALLGSAKRTAADLVPELPLPALEEEREGELPAELRLRRLAASRAPEVRWPRIRVEEG
CTLCPVCTNVCPTEAVRRVREGEEYVLYLQVAACTGCGACVESCPPQVIRLEEAPKEEVGKELLLFRGKPPWYDL
>Mature_314_residues
GFLDGLLNAFLKATDPRPRYTEARCLLYKNSVGGCDKCYGVCPKGAVRLEGWRVELDEVLCTGCGLCTGVCPGIALEYPL
GAIQEALIRGKGKLRCSKAEGKGEEVLCLGRLTPGLLAEAGSRFGKVVLARGDCEACRIGGPEVPERLARMAEEARRYFP
VEVEVVEGELPGERVGRRELFQALLGSAKRTAADLVPELPLPALEEEREGELPAELRLRRLAASRAPEVRWPRIRVEEGC
TLCPVCTNVCPTEAVRRVREGEEYVLYLQVAACTGCGACVESCPPQVIRLEEAPKEEVGKELLLFRGKPPWYDL

Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.7.- [C]

Molecular weight: Translated: 34472; Mature: 34341

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLDGLLNAFLKATDPRPRYTEARCLLYKNSVGGCDKCYGVCPKGAVRLEGWRVELDEV
CCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEECCCEEEHHHH
LCTGCGLCTGVCPGIALEYPLGAIQEALIRGKGKLRCSKAEGKGEEVLCLGRLTPGLLAE
HHHHCCHHHHHCCCCCHHCCHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCHHHHHH
AGSRFGKVVLARGDCEACRIGGPEVPERLARMAEEARRYFPVEVEVVEGELPGERVGRRE
HHHHHCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHCCHHH
LFQALLGSAKRTAADLVPELPLPALEEEREGELPAELRLRRLAASRAPEVRWPRIRVEEG
HHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCC
CTLCPVCTNVCPTEAVRRVREGEEYVLYLQVAACTGCGACVESCPPQVIRLEEAPKEEVG
CEECHHHHCCCHHHHHHHHHCCCCEEEEEEEEHHCCHHHHHHHCCHHEEECCCCCHHHHC
KELLLFRGKPPWYDL
CCEEEECCCCCCCCC
>Mature Secondary Structure 
GFLDGLLNAFLKATDPRPRYTEARCLLYKNSVGGCDKCYGVCPKGAVRLEGWRVELDEV
CHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCEEECCCEEEHHHH
LCTGCGLCTGVCPGIALEYPLGAIQEALIRGKGKLRCSKAEGKGEEVLCLGRLTPGLLAE
HHHHCCHHHHHCCCCCHHCCHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCHHHHHH
AGSRFGKVVLARGDCEACRIGGPEVPERLARMAEEARRYFPVEVEVVEGELPGERVGRRE
HHHHHCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHCCHHH
LFQALLGSAKRTAADLVPELPLPALEEEREGELPAELRLRRLAASRAPEVRWPRIRVEEG
HHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCC
CTLCPVCTNVCPTEAVRRVREGEEYVLYLQVAACTGCGACVESCPPQVIRLEEAPKEEVG
CEECHHHHCCCHHHHHHHHHCCCCEEEEEEEEHHCCHHHHHHHCCHHEEECCCCCHHHHC
KELLLFRGKPPWYDL
CCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA