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The map label for this gene is 55980319

Identifier: 55980319

GI number: 55980319

Start: 329824

End: 330630

Strand: Reverse

Name: 55980319

Synonym: TTHA0350

Alternate gene names: NA

Gene position: 330630-329824 (Counterclockwise)

Preceding gene: 55980320

Following gene: 55980318

Centisome position: 17.87

GC content: 77.08

Gene sequence:

>807_bases
ATGAGGATCCTCCTCGCCACCGACGGCTCGCCCCAGGCGCGGGGGGCGGAGGCCTTGGCCGAGTGGCTGGCCTACAAGCT
TTCCGCCCCCCTCACGGTCCTCTTCGTGGTGGACACCCGCCTCGCCCGCATCCCGGAGCTTTTGGACTTCGGGGCCCTCA
CGGTGCCCGTGCCCGTCCTCCGGACCGAGTTGGAGCGGGCCTTGGCCCTTAGGGGGGAGGCGGTGCTGGAGCGGGTGCGG
CAGAGCGCCCTGGCGGCGGGGGTGGCGGTGGAGGCGGTCCTGGAGGAGGGCGTGCCCCACGAGGCCATCCTGCGGCGCGC
CCGGGCGGCGGACCTCCTGGTCCTGGGGCGGAGCGGGGAGGCCCACGGGGACGGGTTCGGCGGCCTCGGCAGCACGGCGG
ACCGGGTGCTCCGGGCCTCCCCCGTCCCCGTCCTCCTCGCCCCCGGGGAGCCCGTGGAGCTCGAGGGCGCCCTTTTGGGC
TACGACGCCTCGGAGAGCGCCGTCCGGGCCCTGCACGCCCTCGCCCCCCTGGCCCGGGCCTTGGGGCTTGGGGTCCGGGT
GGTGAGCGTCCACGAGGACCCGGCCCGGGCGGAGGCCTGGGCCCTCGAGGCCGAGGCCTACCTCCGGGACCACGGGGTGG
AGGCGAGCGCCCTCGTCCTGGGGGGGGACGCGGCCGATCACCTTCTCCGCCTCCAGGGCCCCGGGGACCTCCTGGCCCTG
GGGGCGCCTGTGCGGCGGCTCGTCTTCGGCAGCACCGCCGAGCGGGTGATCCGCAACGCCCAGGGCCCCGTCCTCACCGC
CCGCTAG

Upstream 100 bases:

>100_bases
CCTTCGGGGTCCTGCCGGTGCTCTTGGGCCTCGGGGTGTTGCTCCTGCCCGCCTGGGCCCTGGCCCGGGGGGTGCGGGAG
CCTGCCCGTACAATGGGGGT

Downstream 100 bases:

>100_bases
CCCCGGGGTGGTATACTGTCCCCCAAACGGGAAAGGGGGAGCGATGACGGTTCGCCAGGTGCTCGTGCACAAGGGGGGTG
GGGTCCACGCCATCCACCCC

Product: hypothetical protein

Products: NA

Alternate protein names: USP Slr1230 [H]

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MRILLATDGSPQARGAEALAEWLAYKLSAPLTVLFVVDTRLARIPELLDFGALTVPVPVLRTELERALALRGEAVLERVR
QSALAAGVAVEAVLEEGVPHEAILRRARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASPVPVLLAPGEPVELEGALLG
YDASESAVRALHALAPLARALGLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPGDLLAL
GAPVRRLVFGSTAERVIRNAQGPVLTAR

Sequences:

>Translated_268_residues
MRILLATDGSPQARGAEALAEWLAYKLSAPLTVLFVVDTRLARIPELLDFGALTVPVPVLRTELERALALRGEAVLERVR
QSALAAGVAVEAVLEEGVPHEAILRRARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASPVPVLLAPGEPVELEGALLG
YDASESAVRALHALAPLARALGLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPGDLLAL
GAPVRRLVFGSTAERVIRNAQGPVLTAR
>Mature_268_residues
MRILLATDGSPQARGAEALAEWLAYKLSAPLTVLFVVDTRLARIPELLDFGALTVPVPVLRTELERALALRGEAVLERVR
QSALAAGVAVEAVLEEGVPHEAILRRARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASPVPVLLAPGEPVELEGALLG
YDASESAVRALHALAPLARALGLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPGDLLAL
GAPVRRLVFGSTAERVIRNAQGPVLTAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 28013; Mature: 28013

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLATDGSPQARGAEALAEWLAYKLSAPLTVLFVVDTRLARIPELLDFGALTVPVPVL
CEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCHHCCHHHH
RTELERALALRGEAVLERVRQSALAAGVAVEAVLEEGVPHEAILRRARAADLLVLGRSGE
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCC
AHGDGFGGLGSTADRVLRASPVPVLLAPGEPVELEGALLGYDASESAVRALHALAPLARA
CCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCEECCEEEECCCCHHHHHHHHHHHHHHHH
LGLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPGDLLAL
HCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHEEEECCCCCEEEC
GAPVRRLVFGSTAERVIRNAQGPVLTAR
CHHHHHHHHCCHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MRILLATDGSPQARGAEALAEWLAYKLSAPLTVLFVVDTRLARIPELLDFGALTVPVPVL
CEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCHHCCHHHH
RTELERALALRGEAVLERVRQSALAAGVAVEAVLEEGVPHEAILRRARAADLLVLGRSGE
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCC
AHGDGFGGLGSTADRVLRASPVPVLLAPGEPVELEGALLGYDASESAVRALHALAPLARA
CCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCEECCEEEECCCCHHHHHHHHHHHHHHHH
LGLGVRVVSVHEDPARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPGDLLAL
HCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHEEEECCCCCEEEC
GAPVRRLVFGSTAERVIRNAQGPVLTAR
CHHHHHHHHCCHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]