| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980262
Identifier: 55980262
GI number: 55980262
Start: 285158
End: 285526
Strand: Reverse
Name: 55980262
Synonym: TTHA0293
Alternate gene names: NA
Gene position: 285526-285158 (Counterclockwise)
Preceding gene: 55980263
Following gene: 55980261
Centisome position: 15.44
GC content: 73.44
Gene sequence:
>369_bases ATGAGCGAGACCCTCTTGGTCTACGTGCCGGACCTGGGGCAGGGGGTGAGCTTCTACCAGGCCCTGGGGCTCGCCCTGGA GGAGCTCCTCCCCGAGCGGGAGGCCCTTCTTTCCCCCCTCGAGGGCCCCCTGCTCCTCCTGCGCCCGGGGGAAGGGGGCG TGGCGCGGGGCCCCCAGCGCCCGAGGCCCGAGGGGCAGGGCTTCGCCCGACTCCGGGTGGAGGAGGGGCGGCTCGTCTTC CTCGTGGACAACCTGGCCCACGAGAAGCTCCGCCTCGCCAAGTACGGCCTCGGCTTCCGGGAGGCGGGGGACCACCTCCT CCTCTTTGACCCCGGGGGGAACCCCGTCCTGGTGCGGGAGGAGGCGTGA
Upstream 100 bases:
>100_bases TCGGCCTCCTCAAGGCCCACGGGGAGATCGCCCCGGAGGACGTGGGCCTTCTTCGCGTGGTGGCGGATGAGGAGGACCTG AGGCGGTTTCTGAGGAGCCT
Downstream 100 bases:
>100_bases AGCTTCTCCTTCTGGACCTGGACGACACCCTCCTTCAGGACCTTCCGGTAAGCCGCGCGGTCCTGGAGGACCTGGGGCGT AAGGCGGGGGTGGAGGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSETLLVYVPDLGQGVSFYQALGLALEELLPEREALLSPLEGPLLLLRPGEGGVARGPQRPRPEGQGFARLRVEEGRLVF LVDNLAHEKLRLAKYGLGFREAGDHLLLFDPGGNPVLVREEA
Sequences:
>Translated_122_residues MSETLLVYVPDLGQGVSFYQALGLALEELLPEREALLSPLEGPLLLLRPGEGGVARGPQRPRPEGQGFARLRVEEGRLVF LVDNLAHEKLRLAKYGLGFREAGDHLLLFDPGGNPVLVREEA >Mature_121_residues SETLLVYVPDLGQGVSFYQALGLALEELLPEREALLSPLEGPLLLLRPGEGGVARGPQRPRPEGQGFARLRVEEGRLVFL VDNLAHEKLRLAKYGLGFREAGDHLLLFDPGGNPVLVREEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13353; Mature: 13221
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETLLVYVPDLGQGVSFYQALGLALEELLPEREALLSPLEGPLLLLRPGEGGVARGPQR CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCCCCCCC PRPEGQGFARLRVEEGRLVFLVDNLAHEKLRLAKYGLGFREAGDHLLLFDPGGNPVLVRE CCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEE EA CC >Mature Secondary Structure SETLLVYVPDLGQGVSFYQALGLALEELLPEREALLSPLEGPLLLLRPGEGGVARGPQR CCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCCCCCCC PRPEGQGFARLRVEEGRLVFLVDNLAHEKLRLAKYGLGFREAGDHLLLFDPGGNPVLVRE CCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEE EA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA