| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is yfiQ [H]
Identifier: 55980245
GI number: 55980245
Start: 262265
End: 264385
Strand: Reverse
Name: yfiQ [H]
Synonym: TTHA0276
Alternate gene names: 55980245
Gene position: 264385-262265 (Counterclockwise)
Preceding gene: 55980249
Following gene: 55980244
Centisome position: 14.29
GC content: 71.05
Gene sequence:
>2121_bases GTGGAGTTCCTGAGGCGCCTTTCCCCCACCTCCTTGCGCCTGCGCTTCTTCTCCCCCATCTCCCCGGAGAAGGCCGCCGA GCTCCTCCTCTCGGCCAAGCCCGAGGAGGAGAAGGTGACCCTGGTGGTCCTCCTGGGGGAGCCCCCCAGGATCGTGGCCA CCGGGGAGTACGTCCGGGTCAAGGGGGAGGACACCGCCGAGGTGGCCTTCCTGGTGGACGACGCCTTCCAGGGGAAGGGC CTCGGCACCCTCCTTCTGGAAAGGCTCGCCCTCATCGCCGCCAAGCGCGGGGTGCGCCGCTTCCAGGCCTTCGTCCTGGC GGAGAACAAGCAGATGCTAAGCGTCTTTATGGAAAGCGGCTTCCGCGTCCGGGCCCACCGGGAGGGCGGGGAGGTGGAGG TGGAGTTTGAGATCCTCATGGAGGAGGAGACGGCCCGGCGCTTTGAGTGGCGGGAGAAGGTCTCCACCATCGCCAGCCTC CACCCCTTCTTCTTCCCCCGGGGGGTGGCGGTGGTGGGGGCGAGCCGCGACCCGGAGAGCATCGGCTACCGCGTCCTGGA GAACCTCATCTTCGGCCGCTTCCAGGGGCCGGTCTTCCCGGTGAACGAGGCCATCGGGAGGGAGGGGGGGACCGTGGGGC CCCTCCTCGCCTACCCCGGCCTGGAGAGCGTCCCCGGGCCCGTGGACCTCGTGGTGGTGGCCGTGCCCAAGGAGCGGGTC CCGGAGGCCCTCGAGGCCGCGGGGCGCCGGGGAGCGCGGGGGGCCATCGTCCTCACCACGGGCTTCACCCCTAAGGAGGC CCAGGCCCTGGCGGACAAGGCGAGGCGGCTGGGGATGCGCCTTTTGGGCCCGGGCTCCCTGGGCCTCGTCCACACCCACC CCGGGGTGCGCCTGGCGGCGGGCCTCGCCCCCCTGCCCAAAGAGGGGGTCCTGGCCATCTCCAGCCAGTCCGGCACCCTG GGCCGGGCGGTGCTGGCCTTCGCCGAGGAGATGGGGCTTGGCGTGGCGAGCTTCGTCTCGCTTGGGGCCAAGGCGGACAT CTCCTCCAACGACCTCCTCCAGTTCTGGGAGGAGGACGAGCGGACCCGGGTCATCCTCCTTTACCTGGAGCACTTCGGCA ACCCCCGGCGCTTCTCCCGCCTCGCCCGCAGGATCGGGAAGAAAAAGCCCATCCTGGCGGTCCACCCCTCCCGCGACCCC TTGGTCAGGGCCCTCTTCGCCCAGGCGGGGGTGGTGCGGGCCAACAGCCTGGAGGAGGCCTTTGACGTGGCCCTCCTTTT GGCCCAGGGCCCCTTACCGGAGAACGGGCGGGTGCGCCTCATCTCCAACGCCTCCGGCCCCTCCAACCTGGCCCTCGAGG CCCTGAAGGAAGGGGGGATGGAGGTGGAGCACGTGGACCTGGGCTCCACGGCCGACCTCGAGGCCTTCCGCCGGGCCCTC GCCGAGGCGGAGGCGAGCGATGCGGGGAGCGTCTTCCTCCTCTTCGTGCCCATGGGCTTCGCCCCGGAGGAGGAGGTGCT GGGGCTTTTGCGGGAGGTGCGGGGAGGGAAGACCTACCTGGCCTGCCTCATGGGGCTTTCCTCGGGGCGGGCCCGGGTCC TGGGCTCCGTCCCCGTCTACCGCTTCCCCGAGTCCGCGGCCATCGCCCTCGCCCGGGCCTGGGGCTACAGGCGGTGGCGG GAGGAGCCCCTCTTCTTCCCCGACTTCCAGGACCTCCGCCTGGAGGAGGCGAGGAGGCTCGTGGAGGGGAAGCGCGCCCT CTCCCAGGAGGAGGGGGAGGCCTTGCTGCGCGCTTTTGGCCTCTCCCTGGGCGAGGAGGAGGGGCTTAGGCTCCGCCTTT TGGCCGAGCCCCACCCCCTTTTCGGGCCCGTCCTGGTTCTGGTCCTGCCCACCCCCCTGGGGGACCAGGTGCTGGAGCAG CGCCTCTCCCCCCTCACCGCCAAGGACGCGGAGGAGCTCCTCCGCCCCCTCGCGGGACGGGTGGAGGGGCTTCCGGCCTA CAAGGAGCTCGTCCTCCGGGTCTCCCGGATGCTGGAGGAGCTTCCCCAGGTGGAAAGGCTCCTTCTGGAGCTTTCCGGTC CCCGGGTGGCGGCCTTTACAATAAGCCTCCGTGCGGATTGA
Upstream 100 bases:
>100_bases CCCCACCCCCCAGCACGGCCTCGAGGAGGGCCCCGTCCTCCTCAAGGACGGACGCACCGCCCTCCTCCGCCGGGCCTCCA AAAAGGACCTCCCCCTTTTC
Downstream 100 bases:
>100_bases AAGCCCGCAAAACCCCCGGGTAAAGGCCCTCGCCGCCCTCAAGGAGCGGAAGGAGCGGGAGCGGACCGGCCGCTTTCTCG TGGAGGGGCGGCGGGAGGTG
Product: acyl-CoA synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 706; Mature: 706
Protein sequence:
>706_residues MEFLRRLSPTSLRLRFFSPISPEKAAELLLSAKPEEEKVTLVVLLGEPPRIVATGEYVRVKGEDTAEVAFLVDDAFQGKG LGTLLLERLALIAAKRGVRRFQAFVLAENKQMLSVFMESGFRVRAHREGGEVEVEFEILMEEETARRFEWREKVSTIASL HPFFFPRGVAVVGASRDPESIGYRVLENLIFGRFQGPVFPVNEAIGREGGTVGPLLAYPGLESVPGPVDLVVVAVPKERV PEALEAAGRRGARGAIVLTTGFTPKEAQALADKARRLGMRLLGPGSLGLVHTHPGVRLAAGLAPLPKEGVLAISSQSGTL GRAVLAFAEEMGLGVASFVSLGAKADISSNDLLQFWEEDERTRVILLYLEHFGNPRRFSRLARRIGKKKPILAVHPSRDP LVRALFAQAGVVRANSLEEAFDVALLLAQGPLPENGRVRLISNASGPSNLALEALKEGGMEVEHVDLGSTADLEAFRRAL AEAEASDAGSVFLLFVPMGFAPEEEVLGLLREVRGGKTYLACLMGLSSGRARVLGSVPVYRFPESAAIALARAWGYRRWR EEPLFFPDFQDLRLEEARRLVEGKRALSQEEGEALLRAFGLSLGEEEGLRLRLLAEPHPLFGPVLVLVLPTPLGDQVLEQ RLSPLTAKDAEELLRPLAGRVEGLPAYKELVLRVSRMLEELPQVERLLLELSGPRVAAFTISLRAD
Sequences:
>Translated_706_residues MEFLRRLSPTSLRLRFFSPISPEKAAELLLSAKPEEEKVTLVVLLGEPPRIVATGEYVRVKGEDTAEVAFLVDDAFQGKG LGTLLLERLALIAAKRGVRRFQAFVLAENKQMLSVFMESGFRVRAHREGGEVEVEFEILMEEETARRFEWREKVSTIASL HPFFFPRGVAVVGASRDPESIGYRVLENLIFGRFQGPVFPVNEAIGREGGTVGPLLAYPGLESVPGPVDLVVVAVPKERV PEALEAAGRRGARGAIVLTTGFTPKEAQALADKARRLGMRLLGPGSLGLVHTHPGVRLAAGLAPLPKEGVLAISSQSGTL GRAVLAFAEEMGLGVASFVSLGAKADISSNDLLQFWEEDERTRVILLYLEHFGNPRRFSRLARRIGKKKPILAVHPSRDP LVRALFAQAGVVRANSLEEAFDVALLLAQGPLPENGRVRLISNASGPSNLALEALKEGGMEVEHVDLGSTADLEAFRRAL AEAEASDAGSVFLLFVPMGFAPEEEVLGLLREVRGGKTYLACLMGLSSGRARVLGSVPVYRFPESAAIALARAWGYRRWR EEPLFFPDFQDLRLEEARRLVEGKRALSQEEGEALLRAFGLSLGEEEGLRLRLLAEPHPLFGPVLVLVLPTPLGDQVLEQ RLSPLTAKDAEELLRPLAGRVEGLPAYKELVLRVSRMLEELPQVERLLLELSGPRVAAFTISLRAD >Mature_706_residues MEFLRRLSPTSLRLRFFSPISPEKAAELLLSAKPEEEKVTLVVLLGEPPRIVATGEYVRVKGEDTAEVAFLVDDAFQGKG LGTLLLERLALIAAKRGVRRFQAFVLAENKQMLSVFMESGFRVRAHREGGEVEVEFEILMEEETARRFEWREKVSTIASL HPFFFPRGVAVVGASRDPESIGYRVLENLIFGRFQGPVFPVNEAIGREGGTVGPLLAYPGLESVPGPVDLVVVAVPKERV PEALEAAGRRGARGAIVLTTGFTPKEAQALADKARRLGMRLLGPGSLGLVHTHPGVRLAAGLAPLPKEGVLAISSQSGTL GRAVLAFAEEMGLGVASFVSLGAKADISSNDLLQFWEEDERTRVILLYLEHFGNPRRFSRLARRIGKKKPILAVHPSRDP LVRALFAQAGVVRANSLEEAFDVALLLAQGPLPENGRVRLISNASGPSNLALEALKEGGMEVEHVDLGSTADLEAFRRAL AEAEASDAGSVFLLFVPMGFAPEEEVLGLLREVRGGKTYLACLMGLSSGRARVLGSVPVYRFPESAAIALARAWGYRRWR EEPLFFPDFQDLRLEEARRLVEGKRALSQEEGEALLRAFGLSLGEEEGLRLRLLAEPHPLFGPVLVLVLPTPLGDQVLEQ RLSPLTAKDAEELLRPLAGRVEGLPAYKELVLRVSRMLEELPQVERLLLELSGPRVAAFTISLRAD
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=495, Percent_Identity=30.5050505050505, Blast_Score=167, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 77114; Mature: 77114
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLRRLSPTSLRLRFFSPISPEKAAELLLSAKPEEEKVTLVVLLGEPPRIVATGEYVRV CCHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEECCCEEEE KGEDTAEVAFLVDDAFQGKGLGTLLLERLALIAAKRGVRRFQAFVLAENKQMLSVFMESG CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC FRVRAHREGGEVEVEFEILMEEETARRFEWREKVSTIASLHPFFFPRGVAVVGASRDPES CEEEEECCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCHHH IGYRVLENLIFGRFQGPVFPVNEAIGREGGTVGPLLAYPGLESVPGPVDLVVVAVPKERV HHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHCCCCCCCCCCCEEEEEEECCHHHC PEALEAAGRRGARGAIVLTTGFTPKEAQALADKARRLGMRLLGPGSLGLVHTHPGVRLAA HHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCEEEC GLAPLPKEGVLAISSQSGTLGRAVLAFAEEMGLGVASFVSLGAKADISSNDLLQFWEEDE CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHCCCC RTRVILLYLEHFGNPRRFSRLARRIGKKKPILAVHPSRDPLVRALFAQAGVVRANSLEEA CCEEEEEEEHHCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEECCCHHHH FDVALLLAQGPLPENGRVRLISNASGPSNLALEALKEGGMEVEHVDLGSTADLEAFRRAL HHHHHHEECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH AEAEASDAGSVFLLFVPMGFAPEEEVLGLLREVRGGKTYLACLMGLSSGRARVLGSVPVY HHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCE RFPESAAIALARAWGYRRWREEPLFFPDFQDLRLEEARRLVEGKRALSQEEGEALLRAFG ECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LSLGEEEGLRLRLLAEPHPLFGPVLVLVLPTPLGDQVLEQRLSPLTAKDAEELLRPLAGR CCCCCCCCCEEEEEECCCCCHHCEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH VEGLPAYKELVLRVSRMLEELPQVERLLLELSGPRVAAFTISLRAD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECC >Mature Secondary Structure MEFLRRLSPTSLRLRFFSPISPEKAAELLLSAKPEEEKVTLVVLLGEPPRIVATGEYVRV CCHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEECCCEEEE KGEDTAEVAFLVDDAFQGKGLGTLLLERLALIAAKRGVRRFQAFVLAENKQMLSVFMESG CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC FRVRAHREGGEVEVEFEILMEEETARRFEWREKVSTIASLHPFFFPRGVAVVGASRDPES CEEEEECCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCHHH IGYRVLENLIFGRFQGPVFPVNEAIGREGGTVGPLLAYPGLESVPGPVDLVVVAVPKERV HHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHCCCCCCCCCCCEEEEEEECCHHHC PEALEAAGRRGARGAIVLTTGFTPKEAQALADKARRLGMRLLGPGSLGLVHTHPGVRLAA HHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCEEEC GLAPLPKEGVLAISSQSGTLGRAVLAFAEEMGLGVASFVSLGAKADISSNDLLQFWEEDE CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHCCCC RTRVILLYLEHFGNPRRFSRLARRIGKKKPILAVHPSRDPLVRALFAQAGVVRANSLEEA CCEEEEEEEHHCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEECCCHHHH FDVALLLAQGPLPENGRVRLISNASGPSNLALEALKEGGMEVEHVDLGSTADLEAFRRAL HHHHHHEECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH AEAEASDAGSVFLLFVPMGFAPEEEVLGLLREVRGGKTYLACLMGLSSGRARVLGSVPVY HHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCE RFPESAAIALARAWGYRRWREEPLFFPDFQDLRLEEARRLVEGKRALSQEEGEALLRAFG ECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LSLGEEEGLRLRLLAEPHPLFGPVLVLVLPTPLGDQVLEQRLSPLTAKDAEELLRPLAGR CCCCCCCCCEEEEEECCCCCHHCEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH VEGLPAYKELVLRVSRMLEELPQVERLLLELSGPRVAAFTISLRAD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]