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The map label for this gene is 55980234

Identifier: 55980234

GI number: 55980234

Start: 252687

End: 253472

Strand: Direct

Name: 55980234

Synonym: TTHA0265

Alternate gene names: NA

Gene position: 252687-253472 (Clockwise)

Preceding gene: 55980233

Following gene: 55980235

Centisome position: 13.66

GC content: 75.83

Gene sequence:

>786_bases
ATGCTCGGTGGTACGAGGGGTGGTCCTGTGCCCTGGCGCCTGAAGGAGGTGATCCCCGAGGCCCTGAAGCGGGCCGGGGG
CAAGGAGCGGCTCAGGCGGGGCCTCGTCCTCGCCGCCTGGCGGGAGGTGGCGGGAAAGGACCTCGCCCGCTTCACCGAGG
CGGTGGCCCTGGAGGAGGGCGTCCTCGTGGTCCACGTGCCCGACCCCGTGGTGGCCCACCAGCTCACCTACACCCGCCTC
GCCCTCCTCCGCCGCTACGAGGAGCGCTTCCCCGGGGCGGTGCGGGAGATCCGGTTCCAGGTGGGCCCCCTCGAGGCGGA
AGGGGTGGAGGCCCCCCCGCCCTCAGACCCCGGCCGCCTGCGGGAGGCGGGCCGCAAGGCCCTGGCCCTGGCGGAAAAGG
CCCCTCCGGAGCTCCGGGAGCGGGTGGCCCGGGCCGCCCTGGCCCTCTTCCAGAGGCAGCGGGGCGACCCCTGCCCCGTC
TGCCAGACCCCGAGCGAGACCCATCCCTGCCCCACCTGCCGCCGCCACCTGGAAGACCCCGGGGTGCGGCGGGCGGCGGA
GCGGCTCATGCGGGGCCAGGAGGCGGGCCTCGAGGGGGACGCCCTCCGGGCCGCCCGCCACCTGGCCCGGGAAAACCTCC
TCGCCCAGATGCGGGACCTCTACCCCGAGGCCCTGCGGAGCGAGGAGTTCCGCCCCCTCCTCGCCGACCTGGCCCGCCGC
TACCGCAACCTTTTTCCCCAGGAGCCCCTGCCCGAAGGGGTGCGGAGCCTGCTCAAGGAGGGGTGA

Upstream 100 bases:

>100_bases
AGGAGCTGGACGAGGCCCGCAGGCGGGCCGTCCTCGCCTACGCCCAGGCCCTGCCCCAGGCCATCCTGGCGGGGCTGGAA
GCCCCCCCGGGGGTGCCGGT

Downstream 100 bases:

>100_bases
ATGCGCCGCGCCTTCCTCCTCGCCTTCCTGGGCCTCGCCCTGGCCCAGGCCACCTACACCGTGGCCCCCGGGGACACGCT
CTACTCCATCGCCCGGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MLGGTRGGPVPWRLKEVIPEALKRAGGKERLRRGLVLAAWREVAGKDLARFTEAVALEEGVLVVHVPDPVVAHQLTYTRL
ALLRRYEERFPGAVREIRFQVGPLEAEGVEAPPPSDPGRLREAGRKALALAEKAPPELRERVARAALALFQRQRGDPCPV
CQTPSETHPCPTCRRHLEDPGVRRAAERLMRGQEAGLEGDALRAARHLARENLLAQMRDLYPEALRSEEFRPLLADLARR
YRNLFPQEPLPEGVRSLLKEG

Sequences:

>Translated_261_residues
MLGGTRGGPVPWRLKEVIPEALKRAGGKERLRRGLVLAAWREVAGKDLARFTEAVALEEGVLVVHVPDPVVAHQLTYTRL
ALLRRYEERFPGAVREIRFQVGPLEAEGVEAPPPSDPGRLREAGRKALALAEKAPPELRERVARAALALFQRQRGDPCPV
CQTPSETHPCPTCRRHLEDPGVRRAAERLMRGQEAGLEGDALRAARHLARENLLAQMRDLYPEALRSEEFRPLLADLARR
YRNLFPQEPLPEGVRSLLKEG
>Mature_261_residues
MLGGTRGGPVPWRLKEVIPEALKRAGGKERLRRGLVLAAWREVAGKDLARFTEAVALEEGVLVVHVPDPVVAHQLTYTRL
ALLRRYEERFPGAVREIRFQVGPLEAEGVEAPPPSDPGRLREAGRKALALAEKAPPELRERVARAALALFQRQRGDPCPV
CQTPSETHPCPTCRRHLEDPGVRRAAERLMRGQEAGLEGDALRAARHLARENLLAQMRDLYPEALRSEEFRPLLADLARR
YRNLFPQEPLPEGVRSLLKEG

Specific function: Unknown

COG id: COG5512

COG function: function code R; Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29184; Mature: 29184

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGGTRGGPVPWRLKEVIPEALKRAGGKERLRRGLVLAAWREVAGKDLARFTEAVALEEG
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VLVVHVPDPVVAHQLTYTRLALLRRYEERFPGAVREIRFQVGPLEAEGVEAPPPSDPGRL
EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
REAGRKALALAEKAPPELRERVARAALALFQRQRGDPCPVCQTPSETHPCPTCRRHLEDP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCC
GVRRAAERLMRGQEAGLEGDALRAARHLARENLLAQMRDLYPEALRSEEFRPLLADLARR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
YRNLFPQEPLPEGVRSLLKEG
HHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLGGTRGGPVPWRLKEVIPEALKRAGGKERLRRGLVLAAWREVAGKDLARFTEAVALEEG
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VLVVHVPDPVVAHQLTYTRLALLRRYEERFPGAVREIRFQVGPLEAEGVEAPPPSDPGRL
EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
REAGRKALALAEKAPPELRERVARAALALFQRQRGDPCPVCQTPSETHPCPTCRRHLEDP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCC
GVRRAAERLMRGQEAGLEGDALRAARHLARENLLAQMRDLYPEALRSEEFRPLLADLARR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
YRNLFPQEPLPEGVRSLLKEG
HHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA