Click here to switch to the map view.

The map label for this gene is 55980151

Identifier: 55980151

GI number: 55980151

Start: 178038

End: 178484

Strand: Direct

Name: 55980151

Synonym: TTHA0182

Alternate gene names: NA

Gene position: 178038-178484 (Clockwise)

Preceding gene: 55980150

Following gene: 55980152

Centisome position: 9.63

GC content: 67.34

Gene sequence:

>447_bases
GTGAGCTGGGTGGTGCTGGACGCTAGCTTCCTCCTCCGCCTGCTCTTGGCGGCAGACCCAAGGGCCGAAGCCGTACGCCT
CTACCGGGGCTGGAGGCAGGAAGACCGCCCCCTCGCCGCCCCCACCCTGGCCCTTTATGAAGCGGCCGACGCCCTTTACC
GCTACGCCCTCGCCGGGGAGATGACCCTGGCCGAGGCCGAGACCTTTCTAGGGCACCTCCAGAGGCTCGGGATCCGGTTT
TTCGCCGAGCCCTGGACCCACACCCGGGCCTTAGAACTGGCCTGGGCCTTGGGCCTAAAGGCCGCCTACGACGCCCACTA
CCTGGCCCTGGCCGAAGGGTTTCAGGGAGCCTTCTGGACCGCCGACAAAAGGCTGCACCAAAGGGCCCTCGAGGGCCAGG
CCCAAGGGCTCCTTCCCGGCGTTTCCCTTCACCTTCTGGAACCATGA

Upstream 100 bases:

>100_bases
GAGGCCCTCCTCTCCTTTAACCGGGCCATCCGGGCCCGCTTGGGCAGGCCCCTTACCCCCCCTGAGGAGGTGGTTTCCGC
CCTGAGGGAGGAGCGGGACC

Downstream 100 bases:

>100_bases
CCCTGGGCGAGCTCCGGGAAGAGGTCTGGAACGCCCTGGCCCGCTACGACCTCGCCCTCCACCCCACGCCCCCCCACGGC
CACCACCCCAACTTCCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSWVVLDASFLLRLLLAADPRAEAVRLYRGWRQEDRPLAAPTLALYEAADALYRYALAGEMTLAEAETFLGHLQRLGIRF
FAEPWTHTRALELAWALGLKAAYDAHYLALAEGFQGAFWTADKRLHQRALEGQAQGLLPGVSLHLLEP

Sequences:

>Translated_148_residues
MSWVVLDASFLLRLLLAADPRAEAVRLYRGWRQEDRPLAAPTLALYEAADALYRYALAGEMTLAEAETFLGHLQRLGIRF
FAEPWTHTRALELAWALGLKAAYDAHYLALAEGFQGAFWTADKRLHQRALEGQAQGLLPGVSLHLLEP
>Mature_147_residues
SWVVLDASFLLRLLLAADPRAEAVRLYRGWRQEDRPLAAPTLALYEAADALYRYALAGEMTLAEAETFLGHLQRLGIRFF
AEPWTHTRALELAWALGLKAAYDAHYLALAEGFQGAFWTADKRLHQRALEGQAQGLLPGVSLHLLEP

Specific function: Unknown

COG id: COG4113

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16572; Mature: 16441

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWVVLDASFLLRLLLAADPRAEAVRLYRGWRQEDRPLAAPTLALYEAADALYRYALAGE
CCEEEECHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
MTLAEAETFLGHLQRLGIRFFAEPWTHTRALELAWALGLKAAYDAHYLALAEGFQGAFWT
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ADKRLHQRALEGQAQGLLPGVSLHLLEP
HHHHHHHHHHHCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
SWVVLDASFLLRLLLAADPRAEAVRLYRGWRQEDRPLAAPTLALYEAADALYRYALAGE
CEEEECHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
MTLAEAETFLGHLQRLGIRFFAEPWTHTRALELAWALGLKAAYDAHYLALAEGFQGAFWT
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ADKRLHQRALEGQAQGLLPGVSLHLLEP
HHHHHHHHHHHCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA