| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is 55980095
Identifier: 55980095
GI number: 55980095
Start: 125549
End: 125788
Strand: Direct
Name: 55980095
Synonym: TTHA0126
Alternate gene names: NA
Gene position: 125549-125788 (Clockwise)
Preceding gene: 55980094
Following gene: 55980100
Centisome position: 6.79
GC content: 62.5
Gene sequence:
>240_bases ATGCCCAAGACGGAAGCCCGGAAACGCGTGCGCAAGGAGCGCTTGCGGGAGGTCCTGGAAGTTCTCCTGGACGAGCTGGA GGAGGCCTCCCGGGCCTTTCAGAGCGCTTGGAAAAGGGCCAAGGAGAATCCAGAAGACGAGGAGGCCTGGGGGGAGCTTC AGGTCTGGGTTTCCGTGCTCGGGGTCAAGGCCAAGTCCCTGGAAGAACTCCTGGAGGAGGAGGCCTTCCTCACTTCCTGA
Upstream 100 bases:
>100_bases CCCGAGCCCAGGTGGGAGCTCATCCGCTACTGGGAAAAGGAGATCCGGACCTACCCAGGGCGGGTGGAACGGCTCCTCCG TAGAATGGGAAGGAGGTAGG
Downstream 100 bases:
>100_bases GCCAATCCGCAAGCACCTTCTGGTAGAGTTCCGGGTCCAGGCGGGGCCTGTCGTAAAGCCCCGCCTTGAGCCTCTGCCGC TGCGCCTCAAAGAGGATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MPKTEARKRVRKERLREVLEVLLDELEEASRAFQSAWKRAKENPEDEEAWGELQVWVSVLGVKAKSLEELLEEEAFLTS
Sequences:
>Translated_79_residues MPKTEARKRVRKERLREVLEVLLDELEEASRAFQSAWKRAKENPEDEEAWGELQVWVSVLGVKAKSLEELLEEEAFLTS >Mature_78_residues PKTEARKRVRKERLREVLEVLLDELEEASRAFQSAWKRAKENPEDEEAWGELQVWVSVLGVKAKSLEELLEEEAFLTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9242; Mature: 9110
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTEARKRVRKERLREVLEVLLDELEEASRAFQSAWKRAKENPEDEEAWGELQVWVSVL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH GVKAKSLEELLEEEAFLTS HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PKTEARKRVRKERLREVLEVLLDELEEASRAFQSAWKRAKENPEDEEAWGELQVWVSVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH GVKAKSLEELLEEEAFLTS HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA