Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

Click here to switch to the map view.

The map label for this gene is apgM [H]

Identifier: 55980085

GI number: 55980085

Start: 116598

End: 117818

Strand: Direct

Name: apgM [H]

Synonym: TTHA0116

Alternate gene names: 55980085

Gene position: 116598-117818 (Clockwise)

Preceding gene: 55980082

Following gene: 55980086

Centisome position: 6.3

GC content: 67.9

Gene sequence:

>1221_bases
ATGGACCTCTTCCCCGTCCTCAAGGAACTCGCCCAGAAGACCCCGAGCAAGATCCTCCTCATCGTCTTGGACGGCGTGGG
GGGGCTTCCCTTGGAGCCTGGGGGCCCCACGGAGCTCGAGGCCGCCAAGACGCCCAACCTGGACCGCCTGGCGGAGGAGA
GCGCCTTAGGCCTCCTCACCCCCGTCTACCCCGGCCTCGCCCCGGGCTCCGGCCCAGGCCACCTCGCCCTCTTCGGCTAC
GACCCCTTCCGCTACGTGGTGGGCCGGGGGGCTTTGAGCGCCTTGGGCCTCGGGGCCGACTTCCGGGAGGGGGACGTGGC
CTTAAGGGGGAACTTCGCCACCTTAGACCCTGAGGGCAAGGTGGTGGACCGCAGGGCGGGAAGGCCCCCCACGGAGGAGA
ACCAGAGGGTCATCGCCAAACTCAAGGAAGCCATCCCCCGCATAGAGGACGTGGAGGTCCTCTTCTACACGGAAAGCGAG
CACCGCTTCCTGGTGATCCTCCGGGGGGAGGGGCTGGAGGACAAGGTGACGGACACCGACCCCCAGAAGACGGGCCTGCC
CCCCCTAAAGGCCAAGGCCCTGGACGAGGCCTCGGAGAGGACGGCCAGGCTCGTCAACCTGCTTTCGGAGAGGATCCGGG
AGGTCCTCAAGGACGAGCCCCGCATGAACGGGGCCCTCTTCCGGGGGGCCTCCAAGAAGCCAAGCTTCCCCCGGATGCAG
GAGGTCTACAAGCTCACCCCCGCCGCCATCGCCAGCTACCCCATGTACAAGGGCCTGGCCAGCCTGGTGGGCATGGAGGT
CCTTCCCGTGGAGGGGGAGGGGGACGCCCTGGAGGGGAAGCTCAAGGCCCTAAAGGAGAACTGGGGGCGGTACGACTTCT
TCTACTTCCACGTGAAGAAGACGGACGCCATGGGGGAGGACGGGAACTTCCACGGAAAGGTGGAGAAGGTGGAGCTCTTT
GACGCCCTCCTCCCCGAGATCCTGGCCCTAGGCCCGGACGTCCTCGCCATCACGGGAGACCACTCCACCCCCGCCCTCCT
CAAGGCCCACTCCTGGCACCCCGTCCCCCTCCTCCTGAAGGCCCCCTACCTGCGGGCGGACGAGGCGAGGCGCTTCACGG
AGAGGGAGGCCCAAAGGGGAAGCCTCGGCCACCTCCGGGGGGTGGAGCTCATGCCCCTCCTCCTCGCCCACGCGGGGAAG
CTCTTGAAGTACGGGGCCTAA

Upstream 100 bases:

>100_bases
TGGATGACCTCGAGGTACCACTCGCTGAAGTCCTGGCTCTGGGGGGTTAGGCCCTTCTCCTTCGCCATACCCGCCCATCT
TACCCCAGTAAAATGGCCCC

Downstream 100 bases:

>100_bases
AATGGGGAGATGATCCGCCACCGCCTGAGCCTCGAGGAGTTCCAGGCCCTCCTGGAGAAGGCCCCAGAGGGGCTTCGCCT
GGAGCTCTTGGACGGCGAGG

Product: cofactor-independent phosphoglycerate mutase

Products: NA

Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; aPGAM [H]

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MDLFPVLKELAQKTPSKILLIVLDGVGGLPLEPGGPTELEAAKTPNLDRLAEESALGLLTPVYPGLAPGSGPGHLALFGY
DPFRYVVGRGALSALGLGADFREGDVALRGNFATLDPEGKVVDRRAGRPPTEENQRVIAKLKEAIPRIEDVEVLFYTESE
HRFLVILRGEGLEDKVTDTDPQKTGLPPLKAKALDEASERTARLVNLLSERIREVLKDEPRMNGALFRGASKKPSFPRMQ
EVYKLTPAAIASYPMYKGLASLVGMEVLPVEGEGDALEGKLKALKENWGRYDFFYFHVKKTDAMGEDGNFHGKVEKVELF
DALLPEILALGPDVLAITGDHSTPALLKAHSWHPVPLLLKAPYLRADEARRFTEREAQRGSLGHLRGVELMPLLLAHAGK
LLKYGA

Sequences:

>Translated_406_residues
MDLFPVLKELAQKTPSKILLIVLDGVGGLPLEPGGPTELEAAKTPNLDRLAEESALGLLTPVYPGLAPGSGPGHLALFGY
DPFRYVVGRGALSALGLGADFREGDVALRGNFATLDPEGKVVDRRAGRPPTEENQRVIAKLKEAIPRIEDVEVLFYTESE
HRFLVILRGEGLEDKVTDTDPQKTGLPPLKAKALDEASERTARLVNLLSERIREVLKDEPRMNGALFRGASKKPSFPRMQ
EVYKLTPAAIASYPMYKGLASLVGMEVLPVEGEGDALEGKLKALKENWGRYDFFYFHVKKTDAMGEDGNFHGKVEKVELF
DALLPEILALGPDVLAITGDHSTPALLKAHSWHPVPLLLKAPYLRADEARRFTEREAQRGSLGHLRGVELMPLLLAHAGK
LLKYGA
>Mature_406_residues
MDLFPVLKELAQKTPSKILLIVLDGVGGLPLEPGGPTELEAAKTPNLDRLAEESALGLLTPVYPGLAPGSGPGHLALFGY
DPFRYVVGRGALSALGLGADFREGDVALRGNFATLDPEGKVVDRRAGRPPTEENQRVIAKLKEAIPRIEDVEVLFYTESE
HRFLVILRGEGLEDKVTDTDPQKTGLPPLKAKALDEASERTARLVNLLSERIREVLKDEPRMNGALFRGASKKPSFPRMQ
EVYKLTPAAIASYPMYKGLASLVGMEVLPVEGEGDALEGKLKALKENWGRYDFFYFHVKKTDAMGEDGNFHGKVEKVELF
DALLPEILALGPDVLAITGDHSTPALLKAHSWHPVPLLLKAPYLRADEARRFTEREAQRGSLGHLRGVELMPLLLAHAGK
LLKYGA

Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]

COG id: COG3635

COG function: function code G; Predicted phosphoglycerate mutase, AP superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR004456
- InterPro:   IPR006124 [H]

Pfam domain/function: PF01676 Metalloenzyme; PF10143 PhosphMutase [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 44385; Mature: 44385

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLFPVLKELAQKTPSKILLIVLDGVGGLPLEPGGPTELEAAKTPNLDRLAEESALGLLT
CCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
PVYPGLAPGSGPGHLALFGYDPFRYVVGRGALSALGLGADFREGDVALRGNFATLDPEGK
HCCCCCCCCCCCCEEEEEECCHHHHHHHCCHHHHHCCCCCCCCCCEEEECCEEEECCCCC
VVDRRAGRPPTEENQRVIAKLKEAIPRIEDVEVLFYTESEHRFLVILRGEGLEDKVTDTD
EECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCC
PQKTGLPPLKAKALDEASERTARLVNLLSERIREVLKDEPRMNGALFRGASKKPSFPRMQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHH
EVYKLTPAAIASYPMYKGLASLVGMEVLPVEGEGDALEGKLKALKENWGRYDFFYFHVKK
HHHHCCHHHHHHCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEE
TDAMGEDGNFHGKVEKVELFDALLPEILALGPDVLAITGDHSTPALLKAHSWHPVPLLLK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHEEECCCCCCCCEEE
APYLRADEARRFTEREAQRGSLGHLRGVELMPLLLAHAGKLLKYGA
CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLFPVLKELAQKTPSKILLIVLDGVGGLPLEPGGPTELEAAKTPNLDRLAEESALGLLT
CCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
PVYPGLAPGSGPGHLALFGYDPFRYVVGRGALSALGLGADFREGDVALRGNFATLDPEGK
HCCCCCCCCCCCCEEEEEECCHHHHHHHCCHHHHHCCCCCCCCCCEEEECCEEEECCCCC
VVDRRAGRPPTEENQRVIAKLKEAIPRIEDVEVLFYTESEHRFLVILRGEGLEDKVTDTD
EECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCC
PQKTGLPPLKAKALDEASERTARLVNLLSERIREVLKDEPRMNGALFRGASKKPSFPRMQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHH
EVYKLTPAAIASYPMYKGLASLVGMEVLPVEGEGDALEGKLKALKENWGRYDFFYFHVKK
HHHHCCHHHHHHCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEE
TDAMGEDGNFHGKVEKVELFDALLPEILALGPDVLAITGDHSTPALLKAHSWHPVPLLLK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHEEECCCCCCCCEEE
APYLRADEARRFTEREAQRGSLGHLRGVELMPLLLAHAGKLLKYGA
CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA