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The map label for this gene is ddrA [H]

Identifier: 55980050

GI number: 55980050

Start: 81423

End: 82061

Strand: Direct

Name: ddrA [H]

Synonym: TTHA0081

Alternate gene names: 55980050

Gene position: 81423-82061 (Clockwise)

Preceding gene: 55980046

Following gene: 55980051

Centisome position: 4.4

GC content: 67.76

Gene sequence:

>639_bases
ATGGACGAAGTCTGGCGGAAACTGGCCGAACCCTTTCCCCCGGGGGAGGTGCAGTGGCGCGTGGAAGCCCTCTCCCGGGA
CAAGAAGCGGGCCTTGGTGGTCCCCTACGTGGACGCCCGCACCGTGTTGGACCGCCTGGACAAGGTGGTGGGCCCGGAGG
GCTGGCACGACGCCTACGAGGTCCTCTCCGACGCGGAGCGCCTGGTGAAAGACGAGAGGGGCGAGAGGCGGGAGCGCCTT
TGCGAGGTCAAGTGCCGCCTCACCGTCCTCGGGGTCACCAAGGAGGACGTGGGGGAGGGGGACTCCCTGAAGGCCGCCTT
CTCCGACGCCCTCAAACGGGCCGCGGTGAAGTTCGGTGTGGGGCGGTACCTCTACCGCCTGGAGAAGCAGTGGGTGGACT
ACGACCCCGAGAAGGGCCGCTTCACCCCGCCCAAGCTCCCCGAGGCGGAGCCGGAGGCCGAGGCCGAGGAGGAGAAGCCG
GAGGCCCACCGCCTCATTGACCAGCTCCTGGAAAGGCTCAAGGAAAAGGGGCTGGGCAAGGAAGCGGCCAGGATCGTGAA
CAAGTACGGGGGCTACGGCAAGACCCCCGAGGAGACGCGCAAGCTCTACGGGGAGCTCCGCAACCTTCTGAAGGGATGA

Upstream 100 bases:

>100_bases
GGGCCAGGAAGGGAAGGAACGCCAGCCACCGCTTCATGCCCCCATCTTCGCCTTCCCCCAAGGCTTTGGGGTGAGAGCAA
CCTAAAGTAAACTAAAACAC

Downstream 100 bases:

>100_bases
GGGTCGTCGCCCTCGGGGACCTCCACGCCAACTTCCCCCTCCTCTGGCGGATCCTGCGCCGGGAGGGGCTCGCCGACGAG
GGCTTCCGCCCCACGGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: DNA damage response protein A [H]

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MDEVWRKLAEPFPPGEVQWRVEALSRDKKRALVVPYVDARTVLDRLDKVVGPEGWHDAYEVLSDAERLVKDERGERRERL
CEVKCRLTVLGVTKEDVGEGDSLKAAFSDALKRAAVKFGVGRYLYRLEKQWVDYDPEKGRFTPPKLPEAEPEAEAEEEKP
EAHRLIDQLLERLKEKGLGKEAARIVNKYGGYGKTPEETRKLYGELRNLLKG

Sequences:

>Translated_212_residues
MDEVWRKLAEPFPPGEVQWRVEALSRDKKRALVVPYVDARTVLDRLDKVVGPEGWHDAYEVLSDAERLVKDERGERRERL
CEVKCRLTVLGVTKEDVGEGDSLKAAFSDALKRAAVKFGVGRYLYRLEKQWVDYDPEKGRFTPPKLPEAEPEAEAEEEKP
EAHRLIDQLLERLKEKGLGKEAARIVNKYGGYGKTPEETRKLYGELRNLLKG
>Mature_212_residues
MDEVWRKLAEPFPPGEVQWRVEALSRDKKRALVVPYVDARTVLDRLDKVVGPEGWHDAYEVLSDAERLVKDERGERRERL
CEVKCRLTVLGVTKEDVGEGDSLKAAFSDALKRAAVKFGVGRYLYRLEKQWVDYDPEKGRFTPPKLPEAEPEAEAEEEKP
EAHRLIDQLLERLKEKGLGKEAARIVNKYGGYGKTPEETRKLYGELRNLLKG

Specific function: ssDNA-binding protein that contributes to the ionizing radiation resistance of D.deserti. Plays a role in DNA repair and genome reconstitution, in a RecA-independent process, since DdrA is essential for recovery from severe genomic fragmentation as a resu

COG id: COG4712

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RAD52 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007232 [H]

Pfam domain/function: PF04098 Rad52_Rad22 [H]

EC number: NA

Molecular weight: Translated: 24333; Mature: 24333

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEVWRKLAEPFPPGEVQWRVEALSRDKKRALVVPYVDARTVLDRLDKVVGPEGWHDAYE
CCHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHH
VLSDAERLVKDERGERRERLCEVKCRLTVLGVTKEDVGEGDSLKAAFSDALKRAAVKFGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHH
GRYLYRLEKQWVDYDPEKGRFTPPKLPEAEPEAEAEEEKPEAHRLIDQLLERLKEKGLGK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCH
EAARIVNKYGGYGKTPEETRKLYGELRNLLKG
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDEVWRKLAEPFPPGEVQWRVEALSRDKKRALVVPYVDARTVLDRLDKVVGPEGWHDAYE
CCHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHH
VLSDAERLVKDERGERRERLCEVKCRLTVLGVTKEDVGEGDSLKAAFSDALKRAAVKFGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHH
GRYLYRLEKQWVDYDPEKGRFTPPKLPEAEPEAEAEEEKPEAHRLIDQLLERLKEKGLGK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCH
EAARIVNKYGGYGKTPEETRKLYGELRNLLKG
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA