| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980036
Identifier: 55980036
GI number: 55980036
Start: 63918
End: 64898
Strand: Reverse
Name: 55980036
Synonym: TTHA0067
Alternate gene names: NA
Gene position: 64898-63918 (Counterclockwise)
Preceding gene: 55980037
Following gene: 55980032
Centisome position: 3.51
GC content: 75.74
Gene sequence:
>981_bases GTGAGCGCCGAGGTCCTCGTTTACCGCGGCTCCTTGGTGGAAAACCGGCACCGCGTTTCCCTGGCCCTCTGGGGCCCGGA GGGGCTTGTGGCCTACGCGGGCGACCCCGGGCGGGTGGCCTACCTGCGCTCCTCCGCCAAGCCCTTCCAGGCCCTGGCCC TTTACCTCACGGGGGCGGTGGAGCGTTTTGGCCTCACGGAGGAGGAGGTGGCCTTGGCCACGGCGAGCCACGACGGGACG CCCCGGCACGTGGAGGTGGCGGCCCGCTTCCTGGGGAAGCTCGGGCTTGGGCCGGAGCACCTGGTCTGCGGGGTCCACCC GCCCTTCTCCCGGGAGGCGCGGGCGGCCCTCGAGGCCCAGGGCCTTGCGCCCACCCCCCTGCACCACAACTGCTCGGGGA AGCACGCCGGGATGCTGGCCGCGGCCCTGGCCCTGGGGGCGCCCGCGGAGGGGTACCACCTGCCGGACCACCCCGTCCAG CGCCTCAACCTGGCCACCCTGGAGGCCCTCTCCGGGGCCCGGCCCGGGCTCGCCACCGACGGGTGCAGCGTCCCCACCTT CGCCCTCTCCTTGGCCCGGGCCGCCCGGGCCTTCTTCCTCCTGGCGGACCCTGGCCGCGCGCCCGAGGCCTACCGGACGC CCCTCCTCCGGGTGCGGGAGGCCATGCGCCGCCACCCCGACCTGGTGGCGGGGCCGGGGAGCGTGGACACCCTCCTCATG GAGCGGCTCCCCGTGGTGGCCAAACGGGGCGCGGACGGGTACTACGGCCTCGCCCTTCTGGAGGGCCCCCGGGGGCCTTT GGGCGTGGCCTTGAAGGTGGAGGACGGGGCCACCCTGGCCCGGGAGGTGGCGGTGGTGGCCCTCCTCCGGGCCTTGGGCC TGGATCCGGGAAAGACGCCTTGGGACCGCCCCCCCGTGCGCAACCACCGGGGCCTCGAGGTGGGCCACCTGGAGGCCCGG CTCGGCCTGGTCTGGGTCTGA
Upstream 100 bases:
>100_bases ACCTGAGGAAGGCGGAGGCCCGGCTGGAAGGGCTTCCCTGTCCCCTCATGGGCCTGGACTGGCGCTCGCTTTTGCAGGAG GCCCGGCGTAGACTCGGGGC
Downstream 100 bases:
>100_bases TCCCACCCCGGCCTTCGCCGGGGGGTAGGTTCAGGCCTTTTCCTTCCGCAGGGCGTCCCGGATCTCCCGGGTGTTCTCGG CGATGCGGATGAGGGAGACC
Product: L-asparaginase II
Products: NA
Alternate protein names: L-Asparaginase; Asparaginase; L-Asparaginase Rmolabile; L-Asparaginase II Protein; L-Asparaginase Rmolabile Subfamily; L-Asparaginase Rmolabile Family; Fumarate Lyase; Asparaginase-Related Protein
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSAEVLVYRGSLVENRHRVSLALWGPEGLVAYAGDPGRVAYLRSSAKPFQALALYLTGAVERFGLTEEEVALATASHDGT PRHVEVAARFLGKLGLGPEHLVCGVHPPFSREARAALEAQGLAPTPLHHNCSGKHAGMLAAALALGAPAEGYHLPDHPVQ RLNLATLEALSGARPGLATDGCSVPTFALSLARAARAFFLLADPGRAPEAYRTPLLRVREAMRRHPDLVAGPGSVDTLLM ERLPVVAKRGADGYYGLALLEGPRGPLGVALKVEDGATLAREVAVVALLRALGLDPGKTPWDRPPVRNHRGLEVGHLEAR LGLVWV
Sequences:
>Translated_326_residues MSAEVLVYRGSLVENRHRVSLALWGPEGLVAYAGDPGRVAYLRSSAKPFQALALYLTGAVERFGLTEEEVALATASHDGT PRHVEVAARFLGKLGLGPEHLVCGVHPPFSREARAALEAQGLAPTPLHHNCSGKHAGMLAAALALGAPAEGYHLPDHPVQ RLNLATLEALSGARPGLATDGCSVPTFALSLARAARAFFLLADPGRAPEAYRTPLLRVREAMRRHPDLVAGPGSVDTLLM ERLPVVAKRGADGYYGLALLEGPRGPLGVALKVEDGATLAREVAVVALLRALGLDPGKTPWDRPPVRNHRGLEVGHLEAR LGLVWV >Mature_325_residues SAEVLVYRGSLVENRHRVSLALWGPEGLVAYAGDPGRVAYLRSSAKPFQALALYLTGAVERFGLTEEEVALATASHDGTP RHVEVAARFLGKLGLGPEHLVCGVHPPFSREARAALEAQGLAPTPLHHNCSGKHAGMLAAALALGAPAEGYHLPDHPVQR LNLATLEALSGARPGLATDGCSVPTFALSLARAARAFFLLADPGRAPEAYRTPLLRVREAMRRHPDLVAGPGSVDTLLME RLPVVAKRGADGYYGLALLEGPRGPLGVALKVEDGATLAREVAVVALLRALGLDPGKTPWDRPPVRNHRGLEVGHLEARL GLVWV
Specific function: Unknown
COG id: COG4448
COG function: function code E; L-asparaginase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34527; Mature: 34396
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEVLVYRGSLVENRHRVSLALWGPEGLVAYAGDPGRVAYLRSSAKPFQALALYLTGAV CCCCEEEEECCCCCCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHH ERFGLTEEEVALATASHDGTPRHVEVAARFLGKLGLGPEHLVCGVHPPFSREARAALEAQ HHHCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCHHHEEECCCCCCCHHHHHHHHHC GLAPTPLHHNCSGKHAGMLAAALALGAPAEGYHLPDHPVQRLNLATLEALSGARPGLATD CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC GCSVPTFALSLARAARAFFLLADPGRAPEAYRTPLLRVREAMRRHPDLVAGPGSVDTLLM CCCCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHH ERLPVVAKRGADGYYGLALLEGPRGPLGVALKVEDGATLAREVAVVALLRALGLDPGKTP HHCCHHHHCCCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC WDRPPVRNHRGLEVGHLEARLGLVWV CCCCCCCCCCCCEEEEEEEEEEEEEC >Mature Secondary Structure SAEVLVYRGSLVENRHRVSLALWGPEGLVAYAGDPGRVAYLRSSAKPFQALALYLTGAV CCCEEEEECCCCCCCEEEEEEEECCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHH ERFGLTEEEVALATASHDGTPRHVEVAARFLGKLGLGPEHLVCGVHPPFSREARAALEAQ HHHCCCHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCHHHEEECCCCCCCHHHHHHHHHC GLAPTPLHHNCSGKHAGMLAAALALGAPAEGYHLPDHPVQRLNLATLEALSGARPGLATD CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC GCSVPTFALSLARAARAFFLLADPGRAPEAYRTPLLRVREAMRRHPDLVAGPGSVDTLLM CCCCHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHH ERLPVVAKRGADGYYGLALLEGPRGPLGVALKVEDGATLAREVAVVALLRALGLDPGKTP HHCCHHHHCCCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC WDRPPVRNHRGLEVGHLEARLGLVWV CCCCCCCCCCCCEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA