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The map label for this gene is ynfM [H]

Identifier: 55980033

GI number: 55980033

Start: 61796

End: 62854

Strand: Direct

Name: ynfM [H]

Synonym: TTHA0064

Alternate gene names: 55980033

Gene position: 61796-62854 (Clockwise)

Preceding gene: 55980029

Following gene: 55980034

Centisome position: 3.34

GC content: 74.13

Gene sequence:

>1059_bases
GTGCGGTTCGCCGTGCTCTTCTCGGGCGTGGCCCTCTACAGCGCCCTCTACGCGGTGGTCCCCCTCCTCCCCCTCCTGGA
GAGGCTCTTCGGGGCCCCCCCGGGGGCCGCGGGGCCGGGGATGGGGCTTCCCCTCCTCCTCCTCGTCCTCCTCTCTCCCC
TGACCCCGAGGCTTTCCCTTCCTCCCGGGGTCCTCCTGGGCGGGGGCCTCCTCCTGGTGGGGGTGGGCGGGGTCCTGGGG
GCTTTGAGCCCGAGCCTTTTCCTCTGGACCCTGGCCCGGCTCCTCCAGGGGGCGGGGGCGGCCCTCGTCCCCGCCCTGGC
CATCGCCCTCCTCCCCCTCCTCTACCCCAGGCGGGCCTGGGAGGTGGCGGGCCTCTACATGGCGGGCAACGTCCTTGGGG
GCGGCCTCGGTCGGGTCCTCGCCGGGGTGCTGGCCGAGGGCCTGGGGGTGCGGGAGGCCCTCCTTTTCCTCTCCCTCCCC
GCCTTGGCCCTGGGCCTCCTCCTCCTCGGCCTGCCCCGGGGAAAGACGCCCCCTTTAGGGCCCGCCCGCTACGACCTCCG
GGCCCTCCCCCTGTACGCGGTGGGCGCCGTCCTCCTCTTCCTCAACCTCTTCCTGGCCAACCTCCTCCCCTACCGGCTTC
TGGACCTGGGCTACCGCCCGGCGGAGGTGGGGCTCGTGTACCTGGCCTACCTCTTTGGCCTCCCGGGGAGCGCCCTCTCG
GGCTTCCTCGCCGCAAGGCTCGGCCCCCGGCGCACCTTCCGCCTGGCCTTCCTCGGCGTCCTCGTGGCCCTAGGCCTCCT
CCTCCTTCCCCCGCCCTTCCTGGTGGCGGGCTTCGTCCTCCTCATGGCCTTCCTCTTCACGGCCCAAAGCCTGGCCTCGG
GGGCCGCGGGGCAGAGGGGGCCCGGGGTGAGCGGGACCTACGTGGCGAGCTTCTACCTGGGAGGCACCCTGGCGGGCCTC
GCCTACCCCCTCTTCCTGCACAGCTTCCCCCTGGCGGTGGGGCTTGGGGCCGCCCTCGCCCTCCTCGCCCTCCTCCTTGC
CCCCGTGGAGGCGCAGTAG

Upstream 100 bases:

>100_bases
GCCTCCTCTCCCTCCTGCCCCAAGGGAGGGAGGTAGCTCATGGGCGGAAGCGGCAGGGGAAGGGCCACCTGAAGCACCCG
CACAGGCCTAGCATAAGGGG

Downstream 100 bases:

>100_bases
CATGACCCCATGGAGGTCCACGCCGCCGACCAGTACCTGGTGGCGCCGGGAGAGGCGGACCTTTTGGAGGTCCACGCCCG
CCTTGCCGGAACGGGGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MRFAVLFSGVALYSALYAVVPLLPLLERLFGAPPGAAGPGMGLPLLLLVLLSPLTPRLSLPPGVLLGGGLLLVGVGGVLG
ALSPSLFLWTLARLLQGAGAALVPALAIALLPLLYPRRAWEVAGLYMAGNVLGGGLGRVLAGVLAEGLGVREALLFLSLP
ALALGLLLLGLPRGKTPPLGPARYDLRALPLYAVGAVLLFLNLFLANLLPYRLLDLGYRPAEVGLVYLAYLFGLPGSALS
GFLAARLGPRRTFRLAFLGVLVALGLLLLPPPFLVAGFVLLMAFLFTAQSLASGAAGQRGPGVSGTYVASFYLGGTLAGL
AYPLFLHSFPLAVGLGAALALLALLLAPVEAQ

Sequences:

>Translated_352_residues
MRFAVLFSGVALYSALYAVVPLLPLLERLFGAPPGAAGPGMGLPLLLLVLLSPLTPRLSLPPGVLLGGGLLLVGVGGVLG
ALSPSLFLWTLARLLQGAGAALVPALAIALLPLLYPRRAWEVAGLYMAGNVLGGGLGRVLAGVLAEGLGVREALLFLSLP
ALALGLLLLGLPRGKTPPLGPARYDLRALPLYAVGAVLLFLNLFLANLLPYRLLDLGYRPAEVGLVYLAYLFGLPGSALS
GFLAARLGPRRTFRLAFLGVLVALGLLLLPPPFLVAGFVLLMAFLFTAQSLASGAAGQRGPGVSGTYVASFYLGGTLAGL
AYPLFLHSFPLAVGLGAALALLALLLAPVEAQ
>Mature_352_residues
MRFAVLFSGVALYSALYAVVPLLPLLERLFGAPPGAAGPGMGLPLLLLVLLSPLTPRLSLPPGVLLGGGLLLVGVGGVLG
ALSPSLFLWTLARLLQGAGAALVPALAIALLPLLYPRRAWEVAGLYMAGNVLGGGLGRVLAGVLAEGLGVREALLFLSLP
ALALGLLLLGLPRGKTPPLGPARYDLRALPLYAVGAVLLFLNLFLANLLPYRLLDLGYRPAEVGLVYLAYLFGLPGSALS
GFLAARLGPRRTFRLAFLGVLVALGLLLLPPPFLVAGFVLLMAFLFTAQSLASGAAGQRGPGVSGTYVASFYLGGTLAGL
AYPLFLHSFPLAVGLGAALALLALLLAPVEAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=367, Percent_Identity=31.0626702997275, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 36086; Mature: 36086

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFAVLFSGVALYSALYAVVPLLPLLERLFGAPPGAAGPGMGLPLLLLVLLSPLTPRLSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
PPGVLLGGGLLLVGVGGVLGALSPSLFLWTLARLLQGAGAALVPALAIALLPLLYPRRAW
CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH
EVAGLYMAGNVLGGGLGRVLAGVLAEGLGVREALLFLSLPALALGLLLLGLPRGKTPPLG
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PARYDLRALPLYAVGAVLLFLNLFLANLLPYRLLDLGYRPAEVGLVYLAYLFGLPGSALS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH
GFLAARLGPRRTFRLAFLGVLVALGLLLLPPPFLVAGFVLLMAFLFTAQSLASGAAGQRG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PGVSGTYVASFYLGGTLAGLAYPLFLHSFPLAVGLGAALALLALLLAPVEAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRFAVLFSGVALYSALYAVVPLLPLLERLFGAPPGAAGPGMGLPLLLLVLLSPLTPRLSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
PPGVLLGGGLLLVGVGGVLGALSPSLFLWTLARLLQGAGAALVPALAIALLPLLYPRRAW
CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH
EVAGLYMAGNVLGGGLGRVLAGVLAEGLGVREALLFLSLPALALGLLLLGLPRGKTPPLG
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PARYDLRALPLYAVGAVLLFLNLFLANLLPYRLLDLGYRPAEVGLVYLAYLFGLPGSALS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH
GFLAARLGPRRTFRLAFLGVLVALGLLLLPPPFLVAGFVLLMAFLFTAQSLASGAAGQRG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PGVSGTYVASFYLGGTLAGLAYPLFLHSFPLAVGLGAALALLALLLAPVEAQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]