Click here to switch to the map view.

The map label for this gene is yajO [H]

Identifier: 55979996

GI number: 55979996

Start: 28350

End: 29300

Strand: Direct

Name: yajO [H]

Synonym: TTHA0027

Alternate gene names: 55979996

Gene position: 28350-29300 (Clockwise)

Preceding gene: 55979995

Following gene: 55979997

Centisome position: 1.53

GC content: 65.72

Gene sequence:

>951_bases
ATGCGCTACCGCAAACTGGGCAAGTGGGGCCTGAAGGTCTCGGAGATCTCCCTGGGGGCCTGGGTCACCTTCGGAGACGT
GGTGAAGGACAAGGAGACCGTCCGGGAGATCGTTGGAATCGCCTACGAAGGGGGCGTGAACTTCTTTGACAACGCCGACG
TCTACGCCAAAGGCCTCGCCGAGGAGATCATGGGGGAGATCCTCCAGGAGTTCCCCCGGCACACCCTGGTCCTCTCCACC
AAGGCCTACTGGCCCATGTCCGAGGACCCGAACGACCGGGGCCTAAGCCGCAAGCACCTTTTGGAGAGCATCACGAAAAG
CCTCAAGCGGCTCAAGACCGACTACGTGGACATCTTCTTCGCCCACCGTTTTGACCCCGAGGTCCCCATGGAGGAGATCG
TCTACGCCATGCACACCATCGTGGAGAAGGGGTACGCCCTCTACTGGGGCACCTCGGAGTGGCCCGCCGCCCGCATCGCC
GAGGCCGTGACCTTCGCCAAGGAAAACGGCCTCCACCCGCCCGTGGTGGAGCAGCCCCAGTACTCCATGCTCTACCGGGA
GCGGGTGGAAAACGAGATCCTCCCCGAGGCGGAGCGCTTCGGGATGGGCCTGGTGGTCTGGAGCCCCCTGGCCCAGGGGA
TGCTCACCGGCAAGTACGACGAGGGCATCCCCGAGGGAAGCCGCTTCGCCCGCTACGACCAGTTCAGGGAGCGCTACCTC
ACCGAGGAGAACCGGAGGAAGGTGCTCAAGCTCAAGGCGGTGGCGGACGAGCTCGGCCTCACCCGCACCCAGCTCGCCCT
GGCCTGGGTGCTGAGGCTTCCCGGGATCAGTAGCGCCATCACCGGGGCCACCCGCCCCGAGCAGATCCGGGAGAACCTGG
GGGCCGCCGGGGTGGACCTGCCCCAGGAGGCCCTGGAGAAGATTGAGGCCATCCTAAGGGGCGAGGCCTAA

Upstream 100 bases:

>100_bases
ATCGGCTTCCAGGCCCCGGGCGGGGTCTTGGAGGTGGAAAGCGACTGACCCGCTGGTCAATCCCGGCCGAAAGGGGTAGA
CTGCGGGGGCCATGGGCGAG

Downstream 100 bases:

>100_bases
GGCGCAGGGGCCAGGCCACCACCCTCTCCCTGCTCAGCCTCTTCCACTGCCTTCCCCTCATCCTCCTCTCCCCCCTGGCG
GGGGCCTTGGTGGACCGCTA

Product: potassium channel subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MRYRKLGKWGLKVSEISLGAWVTFGDVVKDKETVREIVGIAYEGGVNFFDNADVYAKGLAEEIMGEILQEFPRHTLVLST
KAYWPMSEDPNDRGLSRKHLLESITKSLKRLKTDYVDIFFAHRFDPEVPMEEIVYAMHTIVEKGYALYWGTSEWPAARIA
EAVTFAKENGLHPPVVEQPQYSMLYRERVENEILPEAERFGMGLVVWSPLAQGMLTGKYDEGIPEGSRFARYDQFRERYL
TEENRRKVLKLKAVADELGLTRTQLALAWVLRLPGISSAITGATRPEQIRENLGAAGVDLPQEALEKIEAILRGEA

Sequences:

>Translated_316_residues
MRYRKLGKWGLKVSEISLGAWVTFGDVVKDKETVREIVGIAYEGGVNFFDNADVYAKGLAEEIMGEILQEFPRHTLVLST
KAYWPMSEDPNDRGLSRKHLLESITKSLKRLKTDYVDIFFAHRFDPEVPMEEIVYAMHTIVEKGYALYWGTSEWPAARIA
EAVTFAKENGLHPPVVEQPQYSMLYRERVENEILPEAERFGMGLVVWSPLAQGMLTGKYDEGIPEGSRFARYDQFRERYL
TEENRRKVLKLKAVADELGLTRTQLALAWVLRLPGISSAITGATRPEQIRENLGAAGVDLPQEALEKIEAILRGEA
>Mature_316_residues
MRYRKLGKWGLKVSEISLGAWVTFGDVVKDKETVREIVGIAYEGGVNFFDNADVYAKGLAEEIMGEILQEFPRHTLVLST
KAYWPMSEDPNDRGLSRKHLLESITKSLKRLKTDYVDIFFAHRFDPEVPMEEIVYAMHTIVEKGYALYWGTSEWPAARIA
EAVTFAKENGLHPPVVEQPQYSMLYRERVENEILPEAERFGMGLVVWSPLAQGMLTGKYDEGIPEGSRFARYDQFRERYL
TEENRRKVLKLKAVADELGLTRTQLALAWVLRLPGISSAITGATRPEQIRENLGAAGVDLPQEALEKIEAILRGEA

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Homo sapiens, GI27436964, Length=324, Percent_Identity=45.679012345679, Blast_Score=285, Evalue=5e-77,
Organism=Homo sapiens, GI27436962, Length=324, Percent_Identity=45.679012345679, Blast_Score=281, Evalue=4e-76,
Organism=Homo sapiens, GI27436966, Length=324, Percent_Identity=45.3703703703704, Blast_Score=280, Evalue=9e-76,
Organism=Homo sapiens, GI27436969, Length=321, Percent_Identity=44.5482866043614, Blast_Score=277, Evalue=9e-75,
Organism=Homo sapiens, GI4504825, Length=319, Percent_Identity=44.5141065830721, Blast_Score=276, Evalue=2e-74,
Organism=Homo sapiens, GI27436971, Length=321, Percent_Identity=44.2367601246106, Blast_Score=268, Evalue=5e-72,
Organism=Homo sapiens, GI223718702, Length=286, Percent_Identity=29.7202797202797, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI41152114, Length=209, Percent_Identity=31.5789473684211, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI41327764, Length=272, Percent_Identity=29.0441176470588, Blast_Score=89, Evalue=5e-18,
Organism=Escherichia coli, GI87081735, Length=319, Percent_Identity=38.5579937304075, Blast_Score=197, Evalue=8e-52,
Organism=Escherichia coli, GI1789375, Length=304, Percent_Identity=39.1447368421053, Blast_Score=195, Evalue=3e-51,
Organism=Escherichia coli, GI1788070, Length=322, Percent_Identity=29.5031055900621, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1789199, Length=341, Percent_Identity=28.4457478005865, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788081, Length=295, Percent_Identity=25.4237288135593, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI48994888, Length=281, Percent_Identity=23.8434163701068, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI212645785, Length=304, Percent_Identity=22.3684210526316, Blast_Score=72, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6325169, Length=330, Percent_Identity=32.4242424242424, Blast_Score=166, Evalue=6e-42,
Organism=Saccharomyces cerevisiae, GI6323998, Length=329, Percent_Identity=28.5714285714286, Blast_Score=107, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6319958, Length=296, Percent_Identity=28.0405405405405, Blast_Score=105, Evalue=8e-24,
Organism=Saccharomyces cerevisiae, GI6319951, Length=321, Percent_Identity=28.0373831775701, Blast_Score=102, Evalue=8e-23,
Organism=Saccharomyces cerevisiae, GI6322615, Length=227, Percent_Identity=28.1938325991189, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6321052, Length=163, Percent_Identity=28.8343558282209, Blast_Score=62, Evalue=8e-11,
Organism=Drosophila melanogaster, GI45549126, Length=317, Percent_Identity=34.7003154574132, Blast_Score=188, Evalue=4e-48,
Organism=Drosophila melanogaster, GI24640980, Length=317, Percent_Identity=34.7003154574132, Blast_Score=188, Evalue=5e-48,
Organism=Drosophila melanogaster, GI24646155, Length=316, Percent_Identity=28.1645569620253, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24646159, Length=318, Percent_Identity=27.9874213836478, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35883; Mature: 35883

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRKLGKWGLKVSEISLGAWVTFGDVVKDKETVREIVGIAYEGGVNFFDNADVYAKGLA
CCCCHHHCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
EEIMGEILQEFPRHTLVLSTKAYWPMSEDPNDRGLSRKHLLESITKSLKRLKTDYVDIFF
HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AHRFDPEVPMEEIVYAMHTIVEKGYALYWGTSEWPAARIAEAVTFAKENGLHPPVVEQPQ
HHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
YSMLYRERVENEILPEAERFGMGLVVWSPLAQGMLTGKYDEGIPEGSRFARYDQFRERYL
HHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
TEENRRKVLKLKAVADELGLTRTQLALAWVLRLPGISSAITGATRPEQIRENLGAAGVDL
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHCCCCCCCC
PQEALEKIEAILRGEA
CHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRYRKLGKWGLKVSEISLGAWVTFGDVVKDKETVREIVGIAYEGGVNFFDNADVYAKGLA
CCCCHHHCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
EEIMGEILQEFPRHTLVLSTKAYWPMSEDPNDRGLSRKHLLESITKSLKRLKTDYVDIFF
HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AHRFDPEVPMEEIVYAMHTIVEKGYALYWGTSEWPAARIAEAVTFAKENGLHPPVVEQPQ
HHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH
YSMLYRERVENEILPEAERFGMGLVVWSPLAQGMLTGKYDEGIPEGSRFARYDQFRERYL
HHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
TEENRRKVLKLKAVADELGLTRTQLALAWVLRLPGISSAITGATRPEQIRENLGAAGVDL
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHCCCCCCCC
PQEALEKIEAILRGEA
CHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]